Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079557
CDS Infomation

pacid=37443959 polypeptide=PGSC0003DMP400053954 locus=PGSC0003DMG400030978 ID=PGSC0003DMT400079557.v4.03 annot-version=v4.03
Sequence

ATGCATAACAAAAATCTTGTTTCTTCCTACATCTTACTTGTTCTTTTGTTCTCACTACCA
TCTTTCAATATTGTTGTAGCTGGAGATGGAGAAAATTCTGGTGACGCTGGTAACCCATTT
ACACCAAAAGGCTATCTAATTAGATACTGGAAAAAACATGTCTCAAATGACTTACCAAAG
CCATGGTTCCTTCTCAACAAAGCATCTCCATTGAATGCTGCACAATATGCAACTTATACT
AAACTTGTTGCTGATCAAAATGCACTCACTACACACCTCCAATCCTTTTGCTCTTCAGCA
AATCTCATGTGCGCATCAGATTTGTCACCAAGTCTCGTAAAACACACCGGAGATATCCAC
TTTACCACTTACGGCAACAAAAACTTCACCAATTACGGAACCAACGAACCTGGAATCGGA
GTCAACTCCTTCAAAAACTATTCCGAAGATGCATCTGTAAATTCTTTCAGACGTTACGGT
AGAGGTTCTCCCCGTGATAATAAATTTGACAATTATGCCCCTGATGGCAATGTAATTGAC
CAAAGTTTCAATTCCTATAGCACAAATACTCCAGGGGGGTCTGGAAAATTCACTAATTAC
GCCCCAAATACCAATGTCCCCGATCTGCGGTTCACCGCCTATTCTGATCAAGGAACAGGC
GGGGAACAAGAATTCAAAACTTATTTAGAACAAGGGAATTCTGGTGGCCAATCTTTCAAA
AGCTATGGCAAAAATGGGAATGGTGCTGATAGTAAATTCACCAGCTATGGAAACGAAACT
AATGTTGCAGCCTCAACATTTACGAACTACGGTCAAAATGCAAATGGGGAGAACCAAAAT
TTCACATCTTATAGTACTAATGGCAATAATCCTCAAAATAATTTCAGAAACTATGGCGTT
GGAGGTAATGGTCCATCCGAGACTTTTACTAACTACATAGATCAATCAAATGTTGGTGAT
GACAAGTTCATTAACTATGTCAAGGATGCAAATGCTGGTGAAGCGAATTTCACCAACTAT
GGCCAATCATTCAATGAAGGTACCGATGTATTCACTACTTACGGCAAAGGGGGTAATGAC
CCGCATATTAATTTTAAGACTTACGGAGTTAACAACACTTTCAAAGATTATGTCAAAGAT
ACTGCTACATTTTCCAATTACCTAAACGAAACTTCCCAGGTTTTAGCTTCGTCGAGTGAG
GTTAACGGTGGCAAAAAGGTGAATAACCGGTGGGTTGAGCCAGGAAAGTTTTTCCGGGAG
AAGATGCTGAAGAGTGGTACAATCATGCCTATGCCAGATATAAAGGATAAGATGCCTAAA
AGGTCATTTTTGCCCCGGACGATTGCTGCAAAATTACCCTTTTCTTACTCAAAAATTGAT
GAGCTGAACAAAATTTTTCATGCCGCCAATGATTCTCAGGTGGCAAAGATGATCGGAAAT
GCTTTGAGCGAGTGTGAAAGAGCACCGAGCGCTGGCGAGATGAAACAATGTGTTAACTCA
GCTGAAGATATGATTGATTTCACAACATCAGTATTGGGTCGAAATGTGGTGGTTCGAACG
ACTGAGAATACAAAAGGATCAAACGGTAATATCATGATAGGATCGGTCAAAGGAATCAAC
GGTGGAAAAGTTACCAAATCAGTATCCTGTCATCAAACCTTGTACCCTTCCTTACTGTAT
TACTGTCACTCGGTCCCTAAAGTCCGTGTCTACCAAGCGGATATTTTGGACCCAAATTCA
AAGGCTAAAATCAACCATGGTGTTGCCATTTGCCATGTGGATACTTCTTCATGGGGACCT
AGTCATGGGGCCTTCATTGCACTCGGGTCAGGACCGGGGAAAATTGAGGTTTGCCACTGG
ATCTTTGAAAACGATATGACTTGGACAACTGCTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053954
PEP Infomation

pacid=37443959 transcript=PGSC0003DMT400079557 locus=PGSC0003DMG400030978 ID=PGSC0003DMT400079557.v4.03 annot-version=v4.03
Sequence

MHNKNLVSSYILLVLLFSLPSFNIVVAGDGENSGDAGNPFTPKGYLIRYWKKHVSNDLPK
PWFLLNKASPLNAAQYATYTKLVADQNALTTHLQSFCSSANLMCASDLSPSLVKHTGDIH
FTTYGNKNFTNYGTNEPGIGVNSFKNYSEDASVNSFRRYGRGSPRDNKFDNYAPDGNVID
QSFNSYSTNTPGGSGKFTNYAPNTNVPDLRFTAYSDQGTGGEQEFKTYLEQGNSGGQSFK
SYGKNGNGADSKFTSYGNETNVAASTFTNYGQNANGENQNFTSYSTNGNNPQNNFRNYGV
GGNGPSETFTNYIDQSNVGDDKFINYVKDANAGEANFTNYGQSFNEGTDVFTTYGKGGND
PHINFKTYGVNNTFKDYVKDTATFSNYLNETSQVLASSSEVNGGKKVNNRWVEPGKFFRE
KMLKSGTIMPMPDIKDKMPKRSFLPRTIAAKLPFSYSKIDELNKIFHAANDSQVAKMIGN
ALSECERAPSAGEMKQCVNSAEDMIDFTTSVLGRNVVVRTTENTKGSNGNIMIGSVKGIN
GGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYQADILDPNSKAKINHGVAICHVDTSSWGP
SHGAFIALGSGPGKIEVCHWIFENDMTWTTAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400079557
Transcript Infomation

pacid=37443959 locus=PGSC0003DMG400030978 ID=PGSC0003DMT400079557.v4.03 annot-version=v4.03
Sequence

ATGCATAACAAAAATCTTGTTTCTTCCTACATCTTACTTGTTCTTTTGTTCTCACTACCA
TCTTTCAATATTGTTGTAGCTGGAGATGGAGAAAATTCTGGTGACGCTGGTAACCCATTT
ACACCAAAAGGCTATCTAATTAGATACTGGAAAAAACATGTCTCAAATGACTTACCAAAG
CCATGGTTCCTTCTCAACAAAGCATCTCCATTGAATGCTGCACAATATGCAACTTATACT
AAACTTGTTGCTGATCAAAATGCACTCACTACACACCTCCAATCCTTTTGCTCTTCAGCA
AATCTCATGTGCGCATCAGATTTGTCACCAAGTCTCGTAAAACACACCGGAGATATCCAC
TTTACCACTTACGGCAACAAAAACTTCACCAATTACGGAACCAACGAACCTGGAATCGGA
GTCAACTCCTTCAAAAACTATTCCGAAGATGCATCTGTAAATTCTTTCAGACGTTACGGT
AGAGGTTCTCCCCGTGATAATAAATTTGACAATTATGCCCCTGATGGCAATGTAATTGAC
CAAAGTTTCAATTCCTATAGCACAAATACTCCAGGGGGGTCTGGAAAATTCACTAATTAC
GCCCCAAATACCAATGTCCCCGATCTGCGGTTCACCGCCTATTCTGATCAAGGAACAGGC
GGGGAACAAGAATTCAAAACTTATTTAGAACAAGGGAATTCTGGTGGCCAATCTTTCAAA
AGCTATGGCAAAAATGGGAATGGTGCTGATAGTAAATTCACCAGCTATGGAAACGAAACT
AATGTTGCAGCCTCAACATTTACGAACTACGGTCAAAATGCAAATGGGGAGAACCAAAAT
TTCACATCTTATAGTACTAATGGCAATAATCCTCAAAATAATTTCAGAAACTATGGCGTT
GGAGGTAATGGTCCATCCGAGACTTTTACTAACTACATAGATCAATCAAATGTTGGTGAT
GACAAGTTCATTAACTATGTCAAGGATGCAAATGCTGGTGAAGCGAATTTCACCAACTAT
GGCCAATCATTCAATGAAGGTACCGATGTATTCACTACTTACGGCAAAGGGGGTAATGAC
CCGCATATTAATTTTAAGACTTACGGAGTTAACAACACTTTCAAAGATTATGTCAAAGAT
ACTGCTACATTTTCCAATTACCTAAACGAAACTTCCCAGGTTTTAGCTTCGTCGAGTGAG
GTTAACGGTGGCAAAAAGGTGAATAACCGGTGGGTTGAGCCAGGAAAGTTTTTCCGGGAG
AAGATGCTGAAGAGTGGTACAATCATGCCTATGCCAGATATAAAGGATAAGATGCCTAAA
AGGTCATTTTTGCCCCGGACGATTGCTGCAAAATTACCCTTTTCTTACTCAAAAATTGAT
GAGCTGAACAAAATTTTTCATGCCGCCAATGATTCTCAGGTGGCAAAGATGATCGGAAAT
GCTTTGAGCGAGTGTGAAAGAGCACCGAGCGCTGGCGAGATGAAACAATGTGTTAACTCA
GCTGAAGATATGATTGATTTCACAACATCAGTATTGGGTCGAAATGTGGTGGTTCGAACG
ACTGAGAATACAAAAGGATCAAACGGTAATATCATGATAGGATCGGTCAAAGGAATCAAC
GGTGGAAAAGTTACCAAATCAGTATCCTGTCATCAAACCTTGTACCCTTCCTTACTGTAT
TACTGTCACTCGGTCCCTAAAGTCCGTGTCTACCAAGCGGATATTTTGGACCCAAATTCA
AAGGCTAAAATCAACCATGGTGTTGCCATTTGCCATGTGGATACTTCTTCATGGGGACCT
AGTCATGGGGCCTTCATTGCACTCGGGTCAGGACCGGGGAAAATTGAGGTTTGCCACTGG
ATCTTTGAAAACGATATGACTTGGACAACTGCTGATTAA