Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079519
CDS Infomation

pacid=37438539 polypeptide=PGSC0003DMP400053926 locus=PGSC0003DMG400030963 ID=PGSC0003DMT400079519.v4.03 annot-version=v4.03
Sequence

ATGGCTGAATCGACGACAATTCAGAGGAGCTCGCCTGAAGGTGATGATCATGAACTGAAG
GAGGAGAATATTGAGAAGAAAAAGGATTTTACTGCAAATCCTGAGTTCTTCAGTTGTATG
CTTCAGCCAGCGCCTGCCGATTCAGATCCAAATTACATTGGAATTCGCCGGTTCCTCCTT
CATCGCAAAGCTGAATCCGGTGTGCTTCGTCGCAAGGACTGGAGATGCAATGGAAAAGGA
TACGTAGCTTATCGTAATTATATTAGTAGGCCAAGGAATTGGGAGACGTTGCAAATACCA
AGCCGACCAAGTACCCCAGGGAACAGTGGGCGATGGATGCCTTCAGCAAGTCCAGTTTCC
CAGTTACTCGAGTCAGATAGCTGGAATTCCTTAAAGGATTTACGAAGTCCCAGTCAAGCA
AGTCAAGCATTGAGTCGGACTACTAGTTTCAGTTCTAATGCGAGTGACACTGATGATCGG
CCACGTAGAAGGTCGGAACCTGCATATTCCTTTGTGGGGATGCATTGCATTTTTGACCAA
TGCAAGGCCATGGTTACGGTTATAAAGTTTGGGCATATGAGTTCTGATCTACTTGCATAT
GGAGCAACCGATGGCAGTTTGACAGTATGCAGTGTCTCCATGCCCCCTTCAGTCATTAAG
CAGTTAATAGGGCATTCAAAAGATGTCACAGATTTTGACTTCTCCACAAACAATCAGTAC
ATTGCATCATCTTCAATGGATAAAACTGTCAGAGTATGGGATATTTCTAGAGGCCTTTGC
ATTAGGGTGATTTATGGAGTCTCTTCACAGCTTTGTATTCGATTTCATCCTGTGAACAAC
AACTTTCTTTCTGCTGGCAATGCAAAAAAAGAAATAAATGTGTTCAATTTTAGCACGGGG
AGAACGATCAGTACAACTGTGGTCGATGGCGAAGTCACTGCCATGGACCATGACCACACT
GGTCAGTTTATTTTCTGCGGTGATAGTCAGGGATGTATTTACACAGTTAGTATGAACTCC
CATACAGGTGCACTATCTCGAACTCATCGGAATAGAAGTAGCAGTAAGCATAGATCTGCT
GTTACAACTGTTGAGTACAGGACATTTTCTCTGCTGGCACGGGGCCCTGTCTTGCTGGCT
TTTACTCGTGACGGAAGTTTGTCGTTTTTCAGCGTCTCTTTGGAGATGAAAGGTTATTTG
ACACTCCGGTGCTCACTGAAGCTGGCTCCACGGCTACACAGCATTCGTGCTTCTTTCTGT
CCTTTACTTTCCCTTGAAAAGGGAGAATACATAGTTGCTGGAAGTGAAGATGCAAATGTT
TACTTCTATGATTTAACTCGGCCAAGGAATACATGTGTTAACAAACTTCAGGGTCATGGC
TATCCAGTAATAGGTATTGCTTGGAATCATGGAGAGAATTTGTTAGCTTCCTCTGATTTT
GGCGGCACCGTCATTGTATGGAAGAGAGCAAAAACAGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053926
PEP Infomation

pacid=37438539 transcript=PGSC0003DMT400079519 locus=PGSC0003DMG400030963 ID=PGSC0003DMT400079519.v4.03 annot-version=v4.03
Sequence

MAESTTIQRSSPEGDDHELKEENIEKKKDFTANPEFFSCMLQPAPADSDPNYIGIRRFLL
HRKAESGVLRRKDWRCNGKGYVAYRNYISRPRNWETLQIPSRPSTPGNSGRWMPSASPVS
QLLESDSWNSLKDLRSPSQASQALSRTTSFSSNASDTDDRPRRRSEPAYSFVGMHCIFDQ
CKAMVTVIKFGHMSSDLLAYGATDGSLTVCSVSMPPSVIKQLIGHSKDVTDFDFSTNNQY
IASSSMDKTVRVWDISRGLCIRVIYGVSSQLCIRFHPVNNNFLSAGNAKKEINVFNFSTG
RTISTTVVDGEVTAMDHDHTGQFIFCGDSQGCIYTVSMNSHTGALSRTHRNRSSSKHRSA
VTTVEYRTFSLLARGPVLLAFTRDGSLSFFSVSLEMKGYLTLRCSLKLAPRLHSIRASFC
PLLSLEKGEYIVAGSEDANVYFYDLTRPRNTCVNKLQGHGYPVIGIAWNHGENLLASSDF
GGTVIVWKRAKTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400079519
Transcript Infomation

pacid=37438539 locus=PGSC0003DMG400030963 ID=PGSC0003DMT400079519.v4.03 annot-version=v4.03
Sequence

ATGGCTGAATCGACGACAATTCAGAGGAGCTCGCCTGAAGGTGATGATCATGAACTGAAG
GAGGAGAATATTGAGAAGAAAAAGGATTTTACTGCAAATCCTGAGTTCTTCAGTTGTATG
CTTCAGCCAGCGCCTGCCGATTCAGATCCAAATTACATTGGAATTCGCCGGTTCCTCCTT
CATCGCAAAGCTGAATCCGGTGTGCTTCGTCGCAAGGACTGGAGATGCAATGGAAAAGGA
TACGTAGCTTATCGTAATTATATTAGTAGGCCAAGGAATTGGGAGACGTTGCAAATACCA
AGCCGACCAAGTACCCCAGGGAACAGTGGGCGATGGATGCCTTCAGCAAGTCCAGTTTCC
CAGTTACTCGAGTCAGATAGCTGGAATTCCTTAAAGGATTTACGAAGTCCCAGTCAAGCA
AGTCAAGCATTGAGTCGGACTACTAGTTTCAGTTCTAATGCGAGTGACACTGATGATCGG
CCACGTAGAAGGTCGGAACCTGCATATTCCTTTGTGGGGATGCATTGCATTTTTGACCAA
TGCAAGGCCATGGTTACGGTTATAAAGTTTGGGCATATGAGTTCTGATCTACTTGCATAT
GGAGCAACCGATGGCAGTTTGACAGTATGCAGTGTCTCCATGCCCCCTTCAGTCATTAAG
CAGTTAATAGGGCATTCAAAAGATGTCACAGATTTTGACTTCTCCACAAACAATCAGTAC
ATTGCATCATCTTCAATGGATAAAACTGTCAGAGTATGGGATATTTCTAGAGGCCTTTGC
ATTAGGGTGATTTATGGAGTCTCTTCACAGCTTTGTATTCGATTTCATCCTGTGAACAAC
AACTTTCTTTCTGCTGGCAATGCAAAAAAAGAAATAAATGTGTTCAATTTTAGCACGGGG
AGAACGATCAGTACAACTGTGGTCGATGGCGAAGTCACTGCCATGGACCATGACCACACT
GGTCAGTTTATTTTCTGCGGTGATAGTCAGGGATGTATTTACACAGTTAGTATGAACTCC
CATACAGGTGCACTATCTCGAACTCATCGGAATAGAAGTAGCAGTAAGCATAGATCTGCT
GTTACAACTGTTGAGTACAGGACATTTTCTCTGCTGGCACGGGGCCCTGTCTTGCTGGCT
TTTACTCGTGACGGAAGTTTGTCGTTTTTCAGCGTCTCTTTGGAGATGAAAGGTTATTTG
ACACTCCGGTGCTCACTGAAGCTGGCTCCACGGCTACACAGCATTCGTGCTTCTTTCTGT
CCTTTACTTTCCCTTGAAAAGGGAGAATACATAGTTGCTGGAAGTGAAGATGCAAATGTT
TACTTCTATGATTTAACTCGGCCAAGGAATACATGTGTTAACAAACTTCAGGGTCATGGC
TATCCAGTAATAGGTATTGCTTGGAATCATGGAGAGAATTTGTTAGCTTCCTCTGATTTT
GGCGGCACCGTCATTGTATGGAAGAGAGCAAAAACAGCTTAA