Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079517
CDS Infomation

pacid=37441349 polypeptide=PGSC0003DMP400053924 locus=PGSC0003DMG400030961 ID=PGSC0003DMT400079517.v4.03 annot-version=v4.03
Sequence

ATGGCGACTTATTTTCCTAGTCCAAACAATCAAAGAGATGCTGATCAGACATTTCAATAT
TTTAGGCAATCTTTGCCTGAGTCTTATTCAGAAGCTTCAAATGCTCCAGAAAACATGATG
GTATTCATGAACTATTCTTCTTCTGGGGCATATTCAGATATGTTGACGGGTACTTCCCAA
CAACAACACAGCTGCATCGATATCCCATCTATAGGAGCTACGTCTTCCAACACATCCCAA
CAAGAAATATTGTCAAATCTTGGAGGATCGCAGATGGGGATTCAGGATTTTTCTTCATGG
AGAGATAGCAGAAATGAGATGCTAGCTGATAATGTCTTTCAAGTTGCACAAAATGTGCAG
GGTCAAGGATTATCCCTCAGTCTTGGCTCCAATATACCATCTGGAATTGGAATTTCACAT
GTCCAATCTCAGAATCCTAACCAAGGTGGCGGTTTTAACATGTCCTTTGGAGATGGTGAT
AATTCCCAACCAAAAGAACAAAGAAATGCAGATTATTTTCCTCCGGATAATCCTGGAAGG
GACTTGGATGCTATGAAAGGGTATAATTCTCCATATGGTACATCGAGTATTGCAAGGACC
ATTCCCAGCTCGAAGTATTTGAAAGCAGCTCAATATTTGCTTGATGAGGTTGTTAGTGTC
AGAAAGGCCATCAAGGAGCAAAATTCTAAGAAAGAGTTGACAAAGGATTCCAGAGAGTCT
GATGTGGACTCGAAAAATATATCATCAGATACTCCTGCAAATGGGGGTTCAAATCCTCAT
GAGTCCAAAAACAACCAAAGTGAACTTTCACCTACCGAGAAGCAAGAAGTGCAGAACAAA
CTGGCCAAACTTCTGTCAATGCTGGATGAGATTGATAGAAGGTACAGACAATATTATCAT
CAGATGCAAATAGTGGTTTCATCATTTGATGTGGTAGCTGGAGAAGGAGCAGCTAAACCA
TACACAGCTCTTGCTCTCCAGACAATTTCCCGACACTTCCGTTGCTTGCGTGATGCAATC
TGCGATCAGATTCGAGCATCACGAAGAAGTCTTGGAGAGCAAGATGCTTCAGAAAACAGC
AAAGCGATTGGAATATCACGCCTGCGTTTTGTGGATCATCATATTAGACAGCAGAGAGCC
CTGCAGCAGCTTGGTATGATGCAACAACATGCCTGGAGGCCTCAGAGGGGATTGCCTGAA
AGCTCTGTTTCAGTTTTGCGTGCTTGGCTCTTTGAGCACTTTCTTCATCCCTACCCGAAA
GATTCTGACAAAATTATGCTAGCAAGGCAAACTGGCTTAACGAGAAGTCAGGTATCAAAT
TGGTTCATAAATGCACGGGTGCGTCTTTGGAAACCCATGGTTGAGGAAATGTACAAAGAA
GAGGCTGGTGATGCTAAAATAGACTCAAATTCTTCATCGGATGTTGCCCCCAGACTTGCA
ACAAAAGACTCAAAAGTTGAAGAAAGAGGAGAATTGCACCAGAATGCAGCTTCAGAATTT
GAGCAGTACAATAGTGGCCAAATCCTGGAGTCAAAATCTAACCATGAAGTTGATGTAGAA
ATGGAGGGAGCAAGTAATGCAGAAACTCAAAGTCAATCTGGAATGGAAAATCAAACAGGC
GAACCCCTGCCTGCTATGGATAATTGCACCCTTATGCAGGACGCATTTGTTCAAAGCAAC
GATAGATTCTCAGAATTTGGTAGTTTTGGAAGTGGAAATGTACTACCCAATGGAGTTTCA
CTTACATTGGGGCTGCAGCAAGGTGAAGGAAGCAACCTACCTATGTCCATCGAAACTCAC
GTTAGTTATGTACCATTAAGAGCAGATGACATGTATAGTACAGCACCTACTACTATGGTC
CCTGAAACAGCAGAATTCAACTGCTTGGATTCTGGGAATAGGCAGCAACCATTTTGGCTC
CTACCATCTGCTACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400053924
PEP Infomation

pacid=37441349 transcript=PGSC0003DMT400079517 locus=PGSC0003DMG400030961 ID=PGSC0003DMT400079517.v4.03 annot-version=v4.03
Sequence

MATYFPSPNNQRDADQTFQYFRQSLPESYSEASNAPENMMVFMNYSSSGAYSDMLTGTSQ
QQHSCIDIPSIGATSSNTSQQEILSNLGGSQMGIQDFSSWRDSRNEMLADNVFQVAQNVQ
GQGLSLSLGSNIPSGIGISHVQSQNPNQGGGFNMSFGDGDNSQPKEQRNADYFPPDNPGR
DLDAMKGYNSPYGTSSIARTIPSSKYLKAAQYLLDEVVSVRKAIKEQNSKKELTKDSRES
DVDSKNISSDTPANGGSNPHESKNNQSELSPTEKQEVQNKLAKLLSMLDEIDRRYRQYYH
QMQIVVSSFDVVAGEGAAKPYTALALQTISRHFRCLRDAICDQIRASRRSLGEQDASENS
KAIGISRLRFVDHHIRQQRALQQLGMMQQHAWRPQRGLPESSVSVLRAWLFEHFLHPYPK
DSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEAGDAKIDSNSSSDVAPRLA
TKDSKVEERGELHQNAASEFEQYNSGQILESKSNHEVDVEMEGASNAETQSQSGMENQTG
EPLPAMDNCTLMQDAFVQSNDRFSEFGSFGSGNVLPNGVSLTLGLQQGEGSNLPMSIETH
VSYVPLRADDMYSTAPTTMVPETAEFNCLDSGNRQQPFWLLPSAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400079517
Transcript Infomation

pacid=37441349 locus=PGSC0003DMG400030961 ID=PGSC0003DMT400079517.v4.03 annot-version=v4.03
Sequence

ATGGCGACTTATTTTCCTAGTCCAAACAATCAAAGAGATGCTGATCAGACATTTCAATAT
TTTAGGCAATCTTTGCCTGAGTCTTATTCAGAAGCTTCAAATGCTCCAGAAAACATGATG
GTATTCATGAACTATTCTTCTTCTGGGGCATATTCAGATATGTTGACGGGTACTTCCCAA
CAACAACACAGCTGCATCGATATCCCATCTATAGGAGCTACGTCTTCCAACACATCCCAA
CAAGAAATATTGTCAAATCTTGGAGGATCGCAGATGGGGATTCAGGATTTTTCTTCATGG
AGAGATAGCAGAAATGAGATGCTAGCTGATAATGTCTTTCAAGTTGCACAAAATGTGCAG
GGTCAAGGATTATCCCTCAGTCTTGGCTCCAATATACCATCTGGAATTGGAATTTCACAT
GTCCAATCTCAGAATCCTAACCAAGGTGGCGGTTTTAACATGTCCTTTGGAGATGGTGAT
AATTCCCAACCAAAAGAACAAAGAAATGCAGATTATTTTCCTCCGGATAATCCTGGAAGG
GACTTGGATGCTATGAAAGGGTATAATTCTCCATATGGTACATCGAGTATTGCAAGGACC
ATTCCCAGCTCGAAGTATTTGAAAGCAGCTCAATATTTGCTTGATGAGGTTGTTAGTGTC
AGAAAGGCCATCAAGGAGCAAAATTCTAAGAAAGAGTTGACAAAGGATTCCAGAGAGTCT
GATGTGGACTCGAAAAATATATCATCAGATACTCCTGCAAATGGGGGTTCAAATCCTCAT
GAGTCCAAAAACAACCAAAGTGAACTTTCACCTACCGAGAAGCAAGAAGTGCAGAACAAA
CTGGCCAAACTTCTGTCAATGCTGGATGAGATTGATAGAAGGTACAGACAATATTATCAT
CAGATGCAAATAGTGGTTTCATCATTTGATGTGGTAGCTGGAGAAGGAGCAGCTAAACCA
TACACAGCTCTTGCTCTCCAGACAATTTCCCGACACTTCCGTTGCTTGCGTGATGCAATC
TGCGATCAGATTCGAGCATCACGAAGAAGTCTTGGAGAGCAAGATGCTTCAGAAAACAGC
AAAGCGATTGGAATATCACGCCTGCGTTTTGTGGATCATCATATTAGACAGCAGAGAGCC
CTGCAGCAGCTTGGTATGATGCAACAACATGCCTGGAGGCCTCAGAGGGGATTGCCTGAA
AGCTCTGTTTCAGTTTTGCGTGCTTGGCTCTTTGAGCACTTTCTTCATCCCTACCCGAAA
GATTCTGACAAAATTATGCTAGCAAGGCAAACTGGCTTAACGAGAAGTCAGGTATCAAAT
TGGTTCATAAATGCACGGGTGCGTCTTTGGAAACCCATGGTTGAGGAAATGTACAAAGAA
GAGGCTGGTGATGCTAAAATAGACTCAAATTCTTCATCGGATGTTGCCCCCAGACTTGCA
ACAAAAGACTCAAAAGTTGAAGAAAGAGGAGAATTGCACCAGAATGCAGCTTCAGAATTT
GAGCAGTACAATAGTGGCCAAATCCTGGAGTCAAAATCTAACCATGAAGTTGATGTAGAA
ATGGAGGGAGCAAGTAATGCAGAAACTCAAAGTCAATCTGGAATGGAAAATCAAACAGGC
GAACCCCTGCCTGCTATGGATAATTGCACCCTTATGCAGGACGCATTTGTTCAAAGCAAC
GATAGATTCTCAGAATTTGGTAGTTTTGGAAGTGGAAATGTACTACCCAATGGAGTTTCA
CTTACATTGGGGCTGCAGCAAGGTGAAGGAAGCAACCTACCTATGTCCATCGAAACTCAC
GTTAGTTATGTACCATTAAGAGCAGATGACATGTATAGTACAGCACCTACTACTATGGTC
CCTGAAACAGCAGAATTCAACTGCTTGGATTCTGGGAATAGGCAGCAACCATTTTGGCTC
CTACCATCTGCTACATGA