Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079506
CDS Infomation

pacid=37436660 polypeptide=PGSC0003DMP400053916 locus=PGSC0003DMG400030957 ID=PGSC0003DMT400079506.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTCGTTTCTCTCTCCTTTTCTTATTCTCTATCCTCCTAACGACGTCGTTTTTG
TTGGCTGTCAACGGCGAGATTAATGGCGGGGACGATGATATTTTTATCCGTCAAGTCGTC
GGCGATGATGATCATCACATGCTAAACGCCGATCATCACTTTACGCTTTTTAAAAAGAGG
TTCGGGAAAACGTACGCCTCCGATGAGGAGCATCATTATAGATTCTCGGTTTTTAAAGCT
AACTTGCGCCGTGCAATGAGCCACCAGAAGCTCGATCCATCTGCTGTTCACGGCGTGACT
CAGTTTTCCGATCTGACGCCGGACGAATTCAGCCAGAAATTTCTCGGCGTTAACCGCCGG
CTTCGGTTTCCTTCTGACGCCAATAAAGCTCCGATTCTTCCTACCGAGGATCTTCCTTCA
GATTTCGATTGGAGAGAGCACGGTGCTGTCACGCCAGTGAAGAATCAGGGTTCATGCGGC
TCATGCTGGTCATTTAGTACCACTGGTGCATTAGAAGGTGCCAACTTTCTTGCTACAGGG
AAGCTTGTTAGCCTCAGCGAACAGCAACTTGTGGACTGTGATCACGAGTGTGATCCAGAA
GAAAAAGGTTCTTGCGACTCAGGGTGCAGTGGCGGGCTGATGAATAGTGCCTTTGAATAC
ACTCTCAAAGCTGGTGGACTTATGAGAGAAGAAGATTATCCATACACTGGCACCGATAAG
GCAACCTGCAAATTTGACAACACCAAGGTTGCAGCTAAAGTTGCTAACTTTAGTGTTGTC
TCCCTTGACGAAGAACAAATTGCTGCTAATCTTGTCAAGAATGGCCCACTCGCTGTGGCT
ATCAATGCAGTGTTCATGCAGACATATGTCGGTGGAGTCTCCTGCCCATATATATGCTCT
AAGCAGTTGGATCATGGTGTCTTATTAGTTGGTTATGGTACTGGCTTTTCTCCCATTCGA
ATGAAAGAGAAACCATACTGGATCATCAAGAACTCATGGGGAGAGAAATGGGGAGAAAAT
GGATACTACAAAATCTGCAGAGGCCGCAATGTTTGTGGAGTGGATTCAATGGTTTCAACA
GTTGCAGCTGTTAGTACCAGCTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400053916
PEP Infomation

pacid=37436660 transcript=PGSC0003DMT400079506 locus=PGSC0003DMG400030957 ID=PGSC0003DMT400079506.v4.03 annot-version=v4.03
Sequence

MALRFSLLFLFSILLTTSFLLAVNGEINGGDDDIFIRQVVGDDDHHMLNADHHFTLFKKR
FGKTYASDEEHHYRFSVFKANLRRAMSHQKLDPSAVHGVTQFSDLTPDEFSQKFLGVNRR
LRFPSDANKAPILPTEDLPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGALEGANFLATG
KLVSLSEQQLVDCDHECDPEEKGSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTGTDK
ATCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICS
KQLDHGVLLVGYGTGFSPIRMKEKPYWIIKNSWGEKWGENGYYKICRGRNVCGVDSMVST
VAAVSTSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400079506
Transcript Infomation

pacid=37436660 locus=PGSC0003DMG400030957 ID=PGSC0003DMT400079506.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTCGTTTCTCTCTCCTTTTCTTATTCTCTATCCTCCTAACGACGTCGTTTTTG
TTGGCTGTCAACGGCGAGATTAATGGCGGGGACGATGATATTTTTATCCGTCAAGTCGTC
GGCGATGATGATCATCACATGCTAAACGCCGATCATCACTTTACGCTTTTTAAAAAGAGG
TTCGGGAAAACGTACGCCTCCGATGAGGAGCATCATTATAGATTCTCGGTTTTTAAAGCT
AACTTGCGCCGTGCAATGAGCCACCAGAAGCTCGATCCATCTGCTGTTCACGGCGTGACT
CAGTTTTCCGATCTGACGCCGGACGAATTCAGCCAGAAATTTCTCGGCGTTAACCGCCGG
CTTCGGTTTCCTTCTGACGCCAATAAAGCTCCGATTCTTCCTACCGAGGATCTTCCTTCA
GATTTCGATTGGAGAGAGCACGGTGCTGTCACGCCAGTGAAGAATCAGGGTTCATGCGGC
TCATGCTGGTCATTTAGTACCACTGGTGCATTAGAAGGTGCCAACTTTCTTGCTACAGGG
AAGCTTGTTAGCCTCAGCGAACAGCAACTTGTGGACTGTGATCACGAGTGTGATCCAGAA
GAAAAAGGTTCTTGCGACTCAGGGTGCAGTGGCGGGCTGATGAATAGTGCCTTTGAATAC
ACTCTCAAAGCTGGTGGACTTATGAGAGAAGAAGATTATCCATACACTGGCACCGATAAG
GCAACCTGCAAATTTGACAACACCAAGGTTGCAGCTAAAGTTGCTAACTTTAGTGTTGTC
TCCCTTGACGAAGAACAAATTGCTGCTAATCTTGTCAAGAATGGCCCACTCGCTGTGGCT
ATCAATGCAGTGTTCATGCAGACATATGTCGGTGGAGTCTCCTGCCCATATATATGCTCT
AAGCAGTTGGATCATGGTGTCTTATTAGTTGGTTATGGTACTGGCTTTTCTCCCATTCGA
ATGAAAGAGAAACCATACTGGATCATCAAGAACTCATGGGGAGAGAAATGGGGAGAAAAT
GGATACTACAAAATCTGCAGAGGCCGCAATGTTTGTGGAGTGGATTCAATGGTTTCAACA
GTTGCAGCTGTTAGTACCAGCTCATAG