Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079504
CDS Infomation

pacid=37438392 polypeptide=PGSC0003DMP400053915 locus=PGSC0003DMG400030956 ID=PGSC0003DMT400079504.v4.03 annot-version=v4.03
Sequence

ATGGGAAACACACAGCAAAAATTGGCCCAAAATCAGTCAGAACAAGAATCGCCAGTCACA
GAATCACCAGTCACAGAATCACCGGATGAATCATTCACTTGCGAAATTTGTATCGAGCCT
ATATTATTACCAAACAAAAAATTCAAGAACCAGAATCTTTGTGTTCATCCGTTTTGTATG
GACTGTATGGTGAAATACATCTCCGTCAAGCTTGAGGACAACGTCGGCAACATTCCGTGT
CCGTCTCTGAGTTGTGAGAATTTTTTGGACCCAATTTCTTGCCGGAATCTTGTTGGCCCT
CAGCTATTTGTGAGATGGTCCGACGTGTTGTGTGAATCTTCTGTTTTAGGGTTAGCGCAT
TGTTACTGTCCGGATCGGAGATGTTCGACTTTGATTTTGGATGAGTGTGGTGGGAATGCA
AAGCGATCAAAGTGCCCGAATTGCAAGATGCATTTTTGCTTTCAGTGTAAGCTTCCATGG
CATTCTGGATTTCAGTGTGAAGAGAGTCGGGAATTGAGGGATAGAAACGATGTCGTTTTT
GGTGTGGTTGCCGAGGCTAATAAGTGGAAAAGGTGTCCACAGTGTCGTCACTTTGTTGAA
CTTATTGAAGGTTGCAAAATTGTTAAATGCAGGTGTGGTGCCAGTTTCTGCTACAACTGC
GGAAAAAGAGTTCATCGACACTGGTGTAATTGCGATTCTGCTTCCGTGCTCTGCATAAGG
GTCATCCATGGGTTCACCATTATTTTTATTCTCCTGTCTATCTTTTTCATCTTCAGGAAT
TTAAATAGTATACCGCCGAAAAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053915
PEP Infomation

pacid=37438392 transcript=PGSC0003DMT400079504 locus=PGSC0003DMG400030956 ID=PGSC0003DMT400079504.v4.03 annot-version=v4.03
Sequence

MGNTQQKLAQNQSEQESPVTESPVTESPDESFTCEICIEPILLPNKKFKNQNLCVHPFCM
DCMVKYISVKLEDNVGNIPCPSLSCENFLDPISCRNLVGPQLFVRWSDVLCESSVLGLAH
CYCPDRRCSTLILDECGGNAKRSKCPNCKMHFCFQCKLPWHSGFQCEESRELRDRNDVVF
GVVAEANKWKRCPQCRHFVELIEGCKIVKCRCGASFCYNCGKRVHRHWCNCDSASVLCIR
VIHGFTIIFILLSIFFIFRNLNSIPPKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400079504
Transcript Infomation

pacid=37438392 locus=PGSC0003DMG400030956 ID=PGSC0003DMT400079504.v4.03 annot-version=v4.03
Sequence

ATGGGAAACACACAGCAAAAATTGGCCCAAAATCAGTCAGAACAAGAATCGCCAGTCACA
GAATCACCAGTCACAGAATCACCGGATGAATCATTCACTTGCGAAATTTGTATCGAGCCT
ATATTATTACCAAACAAAAAATTCAAGAACCAGAATCTTTGTGTTCATCCGTTTTGTATG
GACTGTATGGTGAAATACATCTCCGTCAAGCTTGAGGACAACGTCGGCAACATTCCGTGT
CCGTCTCTGAGTTGTGAGAATTTTTTGGACCCAATTTCTTGCCGGAATCTTGTTGGCCCT
CAGCTATTTGTGAGATGGTCCGACGTGTTGTGTGAATCTTCTGTTTTAGGGTTAGCGCAT
TGTTACTGTCCGGATCGGAGATGTTCGACTTTGATTTTGGATGAGTGTGGTGGGAATGCA
AAGCGATCAAAGTGCCCGAATTGCAAGATGCATTTTTGCTTTCAGTGTAAGCTTCCATGG
CATTCTGGATTTCAGTGTGAAGAGAGTCGGGAATTGAGGGATAGAAACGATGTCGTTTTT
GGTGTGGTTGCCGAGGCTAATAAGTGGAAAAGGTGTCCACAGTGTCGTCACTTTGTTGAA
CTTATTGAAGGTTGCAAAATTGTTAAATGCAGGTGTGGTGCCAGTTTCTGCTACAACTGC
GGAAAAAGAGTTCATCGACACTGGTGTAATTGCGATTCTGCTTCCGTGCTCTGCATAAGG
GTCATCCATGGGTTCACCATTATTTTTATTCTCCTGTCTATCTTTTTCATCTTCAGGAAT
TTAAATAGTATACCGCCGAAAAACTAG