Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079485
CDS Infomation

pacid=37437741 polypeptide=PGSC0003DMP400053900 locus=PGSC0003DMG400030950 ID=PGSC0003DMT400079485.v4.03 annot-version=v4.03
Sequence

ATGCAGATGCAAATCCTTTCTCTATCTCCCCGCAACTCTTTACCTCTTTCCTCATCAATC
TCTGCATTCTCCGGCTGTAATAGCCGGAAAATCGTCTCCGGTTCGCTTGCTTTTCCACAT
TCCGATATCAATTCGTTTCCGATCTCGCACGGAATCAAATTGGCGTCGCCTATGATGACT
TCGAATTGTGTGCTCCCTAATCAAGCACAGATTGCTGATTTAGGAGTTGAGGACTCAGAC
CTCGACAAATTCGCAGCTGTTAGTAACAAAATTGCTGATGCTGCTGGTGAAGTCATTCGC
AAATACTTCCGGAAGAGCTTCGATATTCTCGATAAAGAAGATTTAAGTCCGGTGACAATT
GCTGATCAAGCGGCAGAGGAATCCATGGTGAAGATAATTCAAGAGAATTTCCCTTCCCAT
GCAATTTATGGAGAGGAGAAGGGATGGAGGTGTCAAGAGGAAACTGCAGAGTATGTTTGG
GTTTTAGATCCAATAGATGGTACTAAGAGTTTCATTACAGGGAAACCTGTGTTTGGCACT
CTTATTGCTCTGTTGTACAAAGGTAAACCGATTCTTGGCGTTATTGACCAGCCTGTACTG
AGAGAGAGGTGGATTGGTTTAAGTGGGCGACGAACTACCTTGAATGGGCAAGAAATATCC
ACACGCAACTGTTCAAGTCTTTCAAAAGCCTACATGTACACTACTAGCCCACATTTGTTC
GAAGGGGATGCTGAGATTGCCTTTGCTCGTGTTAGAAGCAAGGTGAAAGTTCCACTGTAC
GGATGTGACTGCTATGCTTATGCCCTATTGGCTTCTGGATTTGTGGATCTTGTAATAGAG
TCTGGTCTTAAGCCGTACGACTTCCTCTCACTTGTACCAGTAATAGAAGGTGCTGGAGGA
ACAATAACCGACTGGAAAGGACAACATTTTAATTGGAAAGCTTCTGCTGGTTCACCTGCC
ACAAGTTTTAATGTAGTGGCAGCCGGTGATAAACAAGTTCACCAACAAGCTTTGGATGCA
TTGCAGTGGCACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053900
PEP Infomation

pacid=37437741 transcript=PGSC0003DMT400079485 locus=PGSC0003DMG400030950 ID=PGSC0003DMT400079485.v4.03 annot-version=v4.03
Sequence

MQMQILSLSPRNSLPLSSSISAFSGCNSRKIVSGSLAFPHSDINSFPISHGIKLASPMMT
SNCVLPNQAQIADLGVEDSDLDKFAAVSNKIADAAGEVIRKYFRKSFDILDKEDLSPVTI
ADQAAEESMVKIIQENFPSHAIYGEEKGWRCQEETAEYVWVLDPIDGTKSFITGKPVFGT
LIALLYKGKPILGVIDQPVLRERWIGLSGRRTTLNGQEISTRNCSSLSKAYMYTTSPHLF
EGDAEIAFARVRSKVKVPLYGCDCYAYALLASGFVDLVIESGLKPYDFLSLVPVIEGAGG
TITDWKGQHFNWKASAGSPATSFNVVAAGDKQVHQQALDALQWH*

Transcript Sequence

Transcript ID

PGSC0003DMT400079485
Transcript Infomation

pacid=37437741 locus=PGSC0003DMG400030950 ID=PGSC0003DMT400079485.v4.03 annot-version=v4.03
Sequence

ATGCAGATGCAAATCCTTTCTCTATCTCCCCGCAACTCTTTACCTCTTTCCTCATCAATC
TCTGCATTCTCCGGCTGTAATAGCCGGAAAATCGTCTCCGGTTCGCTTGCTTTTCCACAT
TCCGATATCAATTCGTTTCCGATCTCGCACGGAATCAAATTGGCGTCGCCTATGATGACT
TCGAATTGTGTGCTCCCTAATCAAGCACAGATTGCTGATTTAGGAGTTGAGGACTCAGAC
CTCGACAAATTCGCAGCTGTTAGTAACAAAATTGCTGATGCTGCTGGTGAAGTCATTCGC
AAATACTTCCGGAAGAGCTTCGATATTCTCGATAAAGAAGATTTAAGTCCGGTGACAATT
GCTGATCAAGCGGCAGAGGAATCCATGGTGAAGATAATTCAAGAGAATTTCCCTTCCCAT
GCAATTTATGGAGAGGAGAAGGGATGGAGGTGTCAAGAGGAAACTGCAGAGTATGTTTGG
GTTTTAGATCCAATAGATGGTACTAAGAGTTTCATTACAGGGAAACCTGTGTTTGGCACT
CTTATTGCTCTGTTGTACAAAGGTAAACCGATTCTTGGCGTTATTGACCAGCCTGTACTG
AGAGAGAGGTGGATTGGTTTAAGTGGGCGACGAACTACCTTGAATGGGCAAGAAATATCC
ACACGCAACTGTTCAAGTCTTTCAAAAGCCTACATGTACACTACTAGCCCACATTTGTTC
GAAGGGGATGCTGAGATTGCCTTTGCTCGTGTTAGAAGCAAGGTGAAAGTTCCACTGTAC
GGATGTGACTGCTATGCTTATGCCCTATTGGCTTCTGGATTTGTGGATCTTGTAATAGAG
TCTGGTCTTAAGCCGTACGACTTCCTCTCACTTGTACCAGTAATAGAAGGTGCTGGAGGA
ACAATAACCGACTGGAAAGGACAACATTTTAATTGGAAAGCTTCTGCTGGTTCACCTGCC
ACAAGTTTTAATGTAGTGGCAGCCGGTGATAAACAAGTTCACCAACAAGCTTTGGATGCA
TTGCAGTGGCACTAG