Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079418
CDS Infomation

pacid=37434052 polypeptide=PGSC0003DMP400053855 locus=PGSC0003DMG400030914 ID=PGSC0003DMT400079418.v4.03 annot-version=v4.03
Sequence

ATGTTCACCCTCCAAATCCACACCGTCGACTCTCCGCAACCTATTCCGACCACCATCGCC
ACCACTTCCTCCGCCGCACACGGCCCAAAACCTAACAGTGACCTTACCAGCAGCAGCGGA
AGCTTACATCTATCGGAACTTAGAGGAATCGCTCATCTCTTCCGCCACCTTCCCTCTTCT
ACTTCCACCACTATTTCCAACCCTATTTCCCGCACCACCACCGTCTTCATTGTTGCTGCT
CCAAATTACCTCTCCCCTGATGATTTCCTTCTATTCTGTGGAACTCATCTTGCTGATTTC
ACACATGTTATGTTCCTTAAGAATGATGGAATAGAACATAGTTACAGTGTGTTGATCAAT
ATTGTTAATCAGTTGGCTGCTGATGGGTTTTACTGTAGCTTCAACGGCAAAAGGTTTAAG
CCTACCGAGGTTGAGGTTTGCCATATATACTTTATTCAATCAGTGGTGTACGAAGAGTCG
GCATATATTACAAGTACACCTCCTGTTGGTTATACTGAATTGCCAACATGTCCAGTGTGT
CTTGAAAGATTGGACCAAGATACAAGTGGAATACAGAGTACACTTTGTGACCATTCCTTT
CAGTGCTCTTGTGTCTCAAAGTGGACCTATTTGGCATGCCAAGTGTGTCGACTTTGTCAG
CAGCAAGATGAGAAGCCTGCCTGTTCAGAGTGTGGAACAATGAAGAATCTTTGTGTTTGT
TTGATTTGTGGTTTTGTGGGGTGTGGAAGATATGAGAAAAAGCATGCAATTAAACACTGG
ACGGATGCAGCGCATCACTATTCACTTGAATTGGAAACCCAACAAATCTGGGATTATGTA
GGGGACAAGTATGTCCACCGATTGAATCAATCGAAAGGTGATAGTAAGTTGGTTACTGTT
AATTCCCGATGTACTGCAACTGAGGGAGAATGTACTACTTGTGGCGATGATGAGGATTCA
AGTTTTAGTGGTGCCCTTTTCAGCAGCAAAGTTGATTCGATTGTAGATGAGTACAACAAT
CTTCTTGCTAGTCAGCTGGAAACTCAAAGACAACATTATGAATCTCTACTAGCCGAGGCA
AAGAGTGGAAAAGAGAGCTCAATATCCAGAGCAGTGGAGAAGGCAGTTTTCTCAAAGTTG
AATGACTTGCAGGCTAAGATAGAAATGTATACAGAGGAGACAAAGTCCATTGTGGAGAGG
AATCAAGTGCTTTTGAAAAACCAAGAGCTTTTGCAGACAAAGTATAGAGAAACAGCAGAA
AGGGAAAGGTTATTACTCAAGTCGAAGGATGAGAATAAACTGGACCTCAAGGAACAGATA
CGGGACTTAAAAGTTTATGTTGAAGCCCAGAGGAAACTTTCAAACATGGGAATTTCAGAT
GGGAAAGGAGGAACTGTTCTATCTGTAGAACCCAACAAGCAATCTTCCAGCAATTCTCGA
AGACGAGGGAAGCTAGGTCGAAGACGGAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053855
PEP Infomation

pacid=37434052 transcript=PGSC0003DMT400079418 locus=PGSC0003DMG400030914 ID=PGSC0003DMT400079418.v4.03 annot-version=v4.03
Sequence

MFTLQIHTVDSPQPIPTTIATTSSAAHGPKPNSDLTSSSGSLHLSELRGIAHLFRHLPSS
TSTTISNPISRTTTVFIVAAPNYLSPDDFLLFCGTHLADFTHVMFLKNDGIEHSYSVLIN
IVNQLAADGFYCSFNGKRFKPTEVEVCHIYFIQSVVYEESAYITSTPPVGYTELPTCPVC
LERLDQDTSGIQSTLCDHSFQCSCVSKWTYLACQVCRLCQQQDEKPACSECGTMKNLCVC
LICGFVGCGRYEKKHAIKHWTDAAHHYSLELETQQIWDYVGDKYVHRLNQSKGDSKLVTV
NSRCTATEGECTTCGDDEDSSFSGALFSSKVDSIVDEYNNLLASQLETQRQHYESLLAEA
KSGKESSISRAVEKAVFSKLNDLQAKIEMYTEETKSIVERNQVLLKNQELLQTKYRETAE
RERLLLKSKDENKLDLKEQIRDLKVYVEAQRKLSNMGISDGKGGTVLSVEPNKQSSSNSR
RRGKLGRRRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400079418
Transcript Infomation

pacid=37434052 locus=PGSC0003DMG400030914 ID=PGSC0003DMT400079418.v4.03 annot-version=v4.03
Sequence

ATGTTCACCCTCCAAATCCACACCGTCGACTCTCCGCAACCTATTCCGACCACCATCGCC
ACCACTTCCTCCGCCGCACACGGCCCAAAACCTAACAGTGACCTTACCAGCAGCAGCGGA
AGCTTACATCTATCGGAACTTAGAGGAATCGCTCATCTCTTCCGCCACCTTCCCTCTTCT
ACTTCCACCACTATTTCCAACCCTATTTCCCGCACCACCACCGTCTTCATTGTTGCTGCT
CCAAATTACCTCTCCCCTGATGATTTCCTTCTATTCTGTGGAACTCATCTTGCTGATTTC
ACACATGTTATGTTCCTTAAGAATGATGGAATAGAACATAGTTACAGTGTGTTGATCAAT
ATTGTTAATCAGTTGGCTGCTGATGGGTTTTACTGTAGCTTCAACGGCAAAAGGTTTAAG
CCTACCGAGGTTGAGGTTTGCCATATATACTTTATTCAATCAGTGGTGTACGAAGAGTCG
GCATATATTACAAGTACACCTCCTGTTGGTTATACTGAATTGCCAACATGTCCAGTGTGT
CTTGAAAGATTGGACCAAGATACAAGTGGAATACAGAGTACACTTTGTGACCATTCCTTT
CAGTGCTCTTGTGTCTCAAAGTGGACCTATTTGGCATGCCAAGTGTGTCGACTTTGTCAG
CAGCAAGATGAGAAGCCTGCCTGTTCAGAGTGTGGAACAATGAAGAATCTTTGTGTTTGT
TTGATTTGTGGTTTTGTGGGGTGTGGAAGATATGAGAAAAAGCATGCAATTAAACACTGG
ACGGATGCAGCGCATCACTATTCACTTGAATTGGAAACCCAACAAATCTGGGATTATGTA
GGGGACAAGTATGTCCACCGATTGAATCAATCGAAAGGTGATAGTAAGTTGGTTACTGTT
AATTCCCGATGTACTGCAACTGAGGGAGAATGTACTACTTGTGGCGATGATGAGGATTCA
AGTTTTAGTGGTGCCCTTTTCAGCAGCAAAGTTGATTCGATTGTAGATGAGTACAACAAT
CTTCTTGCTAGTCAGCTGGAAACTCAAAGACAACATTATGAATCTCTACTAGCCGAGGCA
AAGAGTGGAAAAGAGAGCTCAATATCCAGAGCAGTGGAGAAGGCAGTTTTCTCAAAGTTG
AATGACTTGCAGGCTAAGATAGAAATGTATACAGAGGAGACAAAGTCCATTGTGGAGAGG
AATCAAGTGCTTTTGAAAAACCAAGAGCTTTTGCAGACAAAGTATAGAGAAACAGCAGAA
AGGGAAAGGTTATTACTCAAGTCGAAGGATGAGAATAAACTGGACCTCAAGGAACAGATA
CGGGACTTAAAAGTTTATGTTGAAGCCCAGAGGAAACTTTCAAACATGGGAATTTCAGAT
GGGAAAGGAGGAACTGTTCTATCTGTAGAACCCAACAAGCAATCTTCCAGCAATTCTCGA
AGACGAGGGAAGCTAGGTCGAAGACGGAACTAG