Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079399
CDS Infomation

pacid=37431940 polypeptide=PGSC0003DMP400053837 locus=PGSC0003DMG400030908 ID=PGSC0003DMT400079399.v4.03 annot-version=v4.03
Sequence

ATGGAATCCTTCGAAGAGCAATTCGAGCAGATAACAACTCTTTTATCATCAAACAAACCG
TTGGCTTACTCGACGCTGCTTCATCTCCAGCAACAATCCGGCGCTGATCCTTCTCTCGTT
AAGCTGCTCGCCGATTCATCTTCTATCATCGTTTCCTATATTCTCTCCGATATCTCCGAT
AACGACGAGGAAATTGCTGCTCAGGCATTGAAGTGCTTGGGATTTATGATATATCATCCA
TCTATAGTTGGCTCAATCAAAGGTGATGATGCCAGGGCTATTGTTGATTCTCTCGTTGAG
GTTATTACAACCAGCAAGATTAAGTCTGTTTGCAACTTGGGTGTGTGGTGTATATCAATG
CAGCAGTTTAACTCATCGCTTTTAGATGCAAATTTCCAGTGTTTACTGAGGGCAATTACT
TATGCGCTTGACAATCCTATTGGCTCTCTTTCAATCACATTTGAGGCAATGCAGGCTGTA
ATGAAGTTGGCGAGTACATCAGCTCAAAATATGAGAGCCATGTCAAACATATGGGCTCCT
CCAGTTTATAGAAGACTAGTCAGCAGTGATAAAAGGGAAAGAGACATGTCAGAGCGTTGT
TTACAAAAGGTCTCAAGCGTGATATGTCCTCCACCAGTAATTCTTTCTAAGGCCCTTGTC
ACAGATTTGAAGAAGACTTTGCTTTTGACGATGGAGGAGCTGCTGAACCAAGGCTTGAAG
ATTCAAACTCTACAAGTGTGGAGATGGTTTCTGCGTCTACTCGGACCTTATGGAATGAAA
TATAAGCATTTGGTCAACAAATTGCTTAAAATTCCAGAACAAACTTTTACGGACCATGAT
CCACAGATTCAGAGTGCTTCACTGGTGGCCTGGGAAGGTCTCATTGATGCTTTAATCTGC
TCACAACTTCATGCTCCTGAAAGCAATGCACTTGTAAAGAATCCTACTGATCAAACGGTA
TTCAAAGGAAGTGATCCAACTGAAGCTGATGGATTTCCCAAAAAGATTAAACTTGTAATG
ACGCCCCTTATAGGAATCATGTCAAGCAATTGTGATGCATCTGTCCATGTATCCTGCCTG
AATACATGGTCTTATCTTCTGTATAAGCTCGACAAGTTAGCCAGCTCCCATTCGGTGGTT
AAAACAGTTTGGGAGCCCATCTTGGAAGTCATCATCAAGGTTGGGCCTGTCAATAAGAAT
ATATGGTCATGGAGTTTCTGCATTGAGCTGCTTGATAATTTTATTTCAGCAGGAAATAAA
GATGTAAATAGTAAGTTAAATGACCATAAGGCAATGAGACTTCCAGAATCTGCAAAATAC
TCATGGAAGTACTATCCAATTAAATGGTCACCTTTGGATCTTGGTAACTTGGAGTTTTTC
TTAAACACAATTCATGGTCTGATCATTCACGGGTCAGATATTACTCTGTCCAGTGAAATC
AGGACAGTGACATATGGTGCTGCCTCAAGTTTGTTTCGATCTCTTCTGAGATCTGTTAAA
CATTGCTTGAAGTCTGACCTTATAACTTATGACGAGGTTATCTTATCTTTGAATATGATG
TTAAAGTTTTTGAAGAGTGTATATGAAAATATGCATTCAAGGGATGGTGGTATAGATGAT
TTGCTACCTCTTTTACTTCAGCTTTTGGAGGCTTTTGTTGAAGAATTAGAACCATCAACA
TTGCAATCCCCTCTTTACAAGGTGATAGTAGACTTCAAAAATATTGAGACGTCAGAACCA
GTCTATAAATTCAAAATTGCAAAGATACCAGATATCAGCTTTATGAATTGTATGGAGAAG
GTCTCACCAGTTGCATATATTACTTTGCTCTATTTCCATGCAGTGACCAGAGCAACATTG
AAAGCATCTGATTATGAAATAGTTGAAGGGAAACACAGATATGTCAAGCTTTTGCTATCT
TCATACGAGCCTTTGGAAATTCTCAATCTTTTTGTTAGTTTATTATATACAGAGAAGATG
TCCTGTTGCTTTGAGATCTGGATAGCTCTGGCGAATTGTCTGAAAGATTACATAGATAAT
CATAACTTCCACTCACTTTTCAAATTGCAGTCGGATAGTCCTGGTTATGCTATAACAATA
CATTTCTTGTGTTATCCATTTGCTGCATATTCTTGCCTTAAGGTGTATCTCAAGCTTCAG
CATGTTATTGAAGTATGGAAATCACTTTATGTTTCTCTTAGCTGGGCATCAGAAATTGGT
TATCCTACTCTAACTGAGGACCTGTTCTCAATGCTCTGTTCATATTTCAATGAAGCATTG
ACCAATGGCGATCTTGTCCCTGAACCTCAGTCAAGTGTAAATGGTCAGGATATTGATGTT
CTGTTATTGTTTGGAGAAGCAATGATATGTGTCGTAGACCAAGCTTCTTTGATAGCAAAA
TCTGAAGTTAAAGAGTCTGAAAGTTGGAGATCCAGCATTATCAAAAGTAGCTTGGATTTC
GCTTCCTGCTTCGTGAAGTTATCTAGGGCAAAGGGTGAAACTAATCTATCAACCAGCCTC
ATTGAGAAAAGGCTGCTATCATCACTGGTTCACTTTGTTGGCTGCTTGAACTTGCAGAAG
GATATAACATTATTCATTGAGATGATGACCAGTACATTGCTTCTGTGGCTGTCACATTTT
GAAGCTCAAGACAGTAACTTCAAAGATCAACTTCAACAGTTATGGATTCAGACACTGAAC
TGTTTGCAGAAAACGCTACCAATAATAGAATTCAATTCCTCTTTTCTTCAGCTCCAAGAG
CCTCTTCTTGAGAAAACTCTTGATCATCCAGATCTCTTCATTTCCAACTCCACTGTTAAC
TTCTGGAATTCTACTTTCGGAGAGCAGACCAAGTTAGACTACCCTCAAAGCTTACTTCCA
GTCCTAGACAAGCTGTCAAGGAGAGGAAAAATAAAACTCGGAAAAAGCAGCCTGTTAACC
AATACTAAGGACAGTGCCGATGTAGATAAAGTTACAGTTCCAAATAGATACAAGGTGCCA
ACAACACTGCATAGGTGCTCCAAACGAGTTGAACTCGTGGGGAATGCAGCTAATAGTTCA
GAAGGAAATGACAGAATTTATTCAAAGTCGAAACGAAGACACACTGAGCTGACTGAGCAT
CAAAAAGAAGTGAGAAGAGCACAACAAGGCCGATCAATGGATTGTAGCGGACATGGTCCA
GGAATCAGGACATATACCAGTGTTGATTTTTCTCAAGGAAATGAAGAATCACAAGAAAGC
CAGGACATTCGAGATGCAGATACTATTTTGGAAATGCTGCGCAAAGTTAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053837
PEP Infomation

pacid=37431940 transcript=PGSC0003DMT400079399 locus=PGSC0003DMG400030908 ID=PGSC0003DMT400079399.v4.03 annot-version=v4.03
Sequence

MESFEEQFEQITTLLSSNKPLAYSTLLHLQQQSGADPSLVKLLADSSSIIVSYILSDISD
NDEEIAAQALKCLGFMIYHPSIVGSIKGDDARAIVDSLVEVITTSKIKSVCNLGVWCISM
QQFNSSLLDANFQCLLRAITYALDNPIGSLSITFEAMQAVMKLASTSAQNMRAMSNIWAP
PVYRRLVSSDKRERDMSERCLQKVSSVICPPPVILSKALVTDLKKTLLLTMEELLNQGLK
IQTLQVWRWFLRLLGPYGMKYKHLVNKLLKIPEQTFTDHDPQIQSASLVAWEGLIDALIC
SQLHAPESNALVKNPTDQTVFKGSDPTEADGFPKKIKLVMTPLIGIMSSNCDASVHVSCL
NTWSYLLYKLDKLASSHSVVKTVWEPILEVIIKVGPVNKNIWSWSFCIELLDNFISAGNK
DVNSKLNDHKAMRLPESAKYSWKYYPIKWSPLDLGNLEFFLNTIHGLIIHGSDITLSSEI
RTVTYGAASSLFRSLLRSVKHCLKSDLITYDEVILSLNMMLKFLKSVYENMHSRDGGIDD
LLPLLLQLLEAFVEELEPSTLQSPLYKVIVDFKNIETSEPVYKFKIAKIPDISFMNCMEK
VSPVAYITLLYFHAVTRATLKASDYEIVEGKHRYVKLLLSSYEPLEILNLFVSLLYTEKM
SCCFEIWIALANCLKDYIDNHNFHSLFKLQSDSPGYAITIHFLCYPFAAYSCLKVYLKLQ
HVIEVWKSLYVSLSWASEIGYPTLTEDLFSMLCSYFNEALTNGDLVPEPQSSVNGQDIDV
LLLFGEAMICVVDQASLIAKSEVKESESWRSSIIKSSLDFASCFVKLSRAKGETNLSTSL
IEKRLLSSLVHFVGCLNLQKDITLFIEMMTSTLLLWLSHFEAQDSNFKDQLQQLWIQTLN
CLQKTLPIIEFNSSFLQLQEPLLEKTLDHPDLFISNSTVNFWNSTFGEQTKLDYPQSLLP
VLDKLSRRGKIKLGKSSLLTNTKDSADVDKVTVPNRYKVPTTLHRCSKRVELVGNAANSS
EGNDRIYSKSKRRHTELTEHQKEVRRAQQGRSMDCSGHGPGIRTYTSVDFSQGNEESQES
QDIRDADTILEMLRKVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400079399
Transcript Infomation

pacid=37431940 locus=PGSC0003DMG400030908 ID=PGSC0003DMT400079399.v4.03 annot-version=v4.03
Sequence

ATGGAATCCTTCGAAGAGCAATTCGAGCAGATAACAACTCTTTTATCATCAAACAAACCG
TTGGCTTACTCGACGCTGCTTCATCTCCAGCAACAATCCGGCGCTGATCCTTCTCTCGTT
AAGCTGCTCGCCGATTCATCTTCTATCATCGTTTCCTATATTCTCTCCGATATCTCCGAT
AACGACGAGGAAATTGCTGCTCAGGCATTGAAGTGCTTGGGATTTATGATATATCATCCA
TCTATAGTTGGCTCAATCAAAGGTGATGATGCCAGGGCTATTGTTGATTCTCTCGTTGAG
GTTATTACAACCAGCAAGATTAAGTCTGTTTGCAACTTGGGTGTGTGGTGTATATCAATG
CAGCAGTTTAACTCATCGCTTTTAGATGCAAATTTCCAGTGTTTACTGAGGGCAATTACT
TATGCGCTTGACAATCCTATTGGCTCTCTTTCAATCACATTTGAGGCAATGCAGGCTGTA
ATGAAGTTGGCGAGTACATCAGCTCAAAATATGAGAGCCATGTCAAACATATGGGCTCCT
CCAGTTTATAGAAGACTAGTCAGCAGTGATAAAAGGGAAAGAGACATGTCAGAGCGTTGT
TTACAAAAGGTCTCAAGCGTGATATGTCCTCCACCAGTAATTCTTTCTAAGGCCCTTGTC
ACAGATTTGAAGAAGACTTTGCTTTTGACGATGGAGGAGCTGCTGAACCAAGGCTTGAAG
ATTCAAACTCTACAAGTGTGGAGATGGTTTCTGCGTCTACTCGGACCTTATGGAATGAAA
TATAAGCATTTGGTCAACAAATTGCTTAAAATTCCAGAACAAACTTTTACGGACCATGAT
CCACAGATTCAGAGTGCTTCACTGGTGGCCTGGGAAGGTCTCATTGATGCTTTAATCTGC
TCACAACTTCATGCTCCTGAAAGCAATGCACTTGTAAAGAATCCTACTGATCAAACGGTA
TTCAAAGGAAGTGATCCAACTGAAGCTGATGGATTTCCCAAAAAGATTAAACTTGTAATG
ACGCCCCTTATAGGAATCATGTCAAGCAATTGTGATGCATCTGTCCATGTATCCTGCCTG
AATACATGGTCTTATCTTCTGTATAAGCTCGACAAGTTAGCCAGCTCCCATTCGGTGGTT
AAAACAGTTTGGGAGCCCATCTTGGAAGTCATCATCAAGGTTGGGCCTGTCAATAAGAAT
ATATGGTCATGGAGTTTCTGCATTGAGCTGCTTGATAATTTTATTTCAGCAGGAAATAAA
GATGTAAATAGTAAGTTAAATGACCATAAGGCAATGAGACTTCCAGAATCTGCAAAATAC
TCATGGAAGTACTATCCAATTAAATGGTCACCTTTGGATCTTGGTAACTTGGAGTTTTTC
TTAAACACAATTCATGGTCTGATCATTCACGGGTCAGATATTACTCTGTCCAGTGAAATC
AGGACAGTGACATATGGTGCTGCCTCAAGTTTGTTTCGATCTCTTCTGAGATCTGTTAAA
CATTGCTTGAAGTCTGACCTTATAACTTATGACGAGGTTATCTTATCTTTGAATATGATG
TTAAAGTTTTTGAAGAGTGTATATGAAAATATGCATTCAAGGGATGGTGGTATAGATGAT
TTGCTACCTCTTTTACTTCAGCTTTTGGAGGCTTTTGTTGAAGAATTAGAACCATCAACA
TTGCAATCCCCTCTTTACAAGGTGATAGTAGACTTCAAAAATATTGAGACGTCAGAACCA
GTCTATAAATTCAAAATTGCAAAGATACCAGATATCAGCTTTATGAATTGTATGGAGAAG
GTCTCACCAGTTGCATATATTACTTTGCTCTATTTCCATGCAGTGACCAGAGCAACATTG
AAAGCATCTGATTATGAAATAGTTGAAGGGAAACACAGATATGTCAAGCTTTTGCTATCT
TCATACGAGCCTTTGGAAATTCTCAATCTTTTTGTTAGTTTATTATATACAGAGAAGATG
TCCTGTTGCTTTGAGATCTGGATAGCTCTGGCGAATTGTCTGAAAGATTACATAGATAAT
CATAACTTCCACTCACTTTTCAAATTGCAGTCGGATAGTCCTGGTTATGCTATAACAATA
CATTTCTTGTGTTATCCATTTGCTGCATATTCTTGCCTTAAGGTGTATCTCAAGCTTCAG
CATGTTATTGAAGTATGGAAATCACTTTATGTTTCTCTTAGCTGGGCATCAGAAATTGGT
TATCCTACTCTAACTGAGGACCTGTTCTCAATGCTCTGTTCATATTTCAATGAAGCATTG
ACCAATGGCGATCTTGTCCCTGAACCTCAGTCAAGTGTAAATGGTCAGGATATTGATGTT
CTGTTATTGTTTGGAGAAGCAATGATATGTGTCGTAGACCAAGCTTCTTTGATAGCAAAA
TCTGAAGTTAAAGAGTCTGAAAGTTGGAGATCCAGCATTATCAAAAGTAGCTTGGATTTC
GCTTCCTGCTTCGTGAAGTTATCTAGGGCAAAGGGTGAAACTAATCTATCAACCAGCCTC
ATTGAGAAAAGGCTGCTATCATCACTGGTTCACTTTGTTGGCTGCTTGAACTTGCAGAAG
GATATAACATTATTCATTGAGATGATGACCAGTACATTGCTTCTGTGGCTGTCACATTTT
GAAGCTCAAGACAGTAACTTCAAAGATCAACTTCAACAGTTATGGATTCAGACACTGAAC
TGTTTGCAGAAAACGCTACCAATAATAGAATTCAATTCCTCTTTTCTTCAGCTCCAAGAG
CCTCTTCTTGAGAAAACTCTTGATCATCCAGATCTCTTCATTTCCAACTCCACTGTTAAC
TTCTGGAATTCTACTTTCGGAGAGCAGACCAAGTTAGACTACCCTCAAAGCTTACTTCCA
GTCCTAGACAAGCTGTCAAGGAGAGGAAAAATAAAACTCGGAAAAAGCAGCCTGTTAACC
AATACTAAGGACAGTGCCGATGTAGATAAAGTTACAGTTCCAAATAGATACAAGGTGCCA
ACAACACTGCATAGGTGCTCCAAACGAGTTGAACTCGTGGGGAATGCAGCTAATAGTTCA
GAAGGAAATGACAGAATTTATTCAAAGTCGAAACGAAGACACACTGAGCTGACTGAGCAT
CAAAAAGAAGTGAGAAGAGCACAACAAGGCCGATCAATGGATTGTAGCGGACATGGTCCA
GGAATCAGGACATATACCAGTGTTGATTTTTCTCAAGGAAATGAAGAATCACAAGAAAGC
CAGGACATTCGAGATGCAGATACTATTTTGGAAATGCTGCGCAAAGTTAAGTAA