Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079398
CDS Infomation

pacid=37432136 polypeptide=PGSC0003DMP400053836 locus=PGSC0003DMG400030907 ID=PGSC0003DMT400079398.v4.03 annot-version=v4.03
Sequence

ATGGATACGATGTCGTCTTCAGCGTCAAATGCAGTAGCGAATAACAAGGATGTTCCGTCT
TCGATGACGCCGACCGCGGTGGAGGATGACGGCGCGATGTCTGTCAATTCAGGACTTGCA
AAGGAGGCAGCTTTGTTTTTTCAGTCGGGAAATTACGCTGATTGTGTTAGAGTTTTGTAT
CAACTGTTGCAGAAAAAAGAAGGCGATCCAAAGGTTCTACATAACATTGCGATTGCTGTG
AACTTTCAAGATGGTTGCTCCAATCCTAAGAAGCTGATTGATGAACTTAATAATGCTAAG
AAAAGAAGCGAAGAGCTTGCTTGTGCTGCTGGCGACCAGGCAGATCCTGCTAGCAATGGT
GGAGCCAAAGCTGTGACAGGAATTAGTGGAAATAACAGTGCACCACGGCATCTATCTGCT
CAACATAGTTCCGAACTTGTTTATGCTGATGAGTTTGATCCCTCAGTGACCACATACAAT
CTAGCAGTTTGCTGGTTTCATTTGCATGAACATGCAAAAGCATTTTCAATTTTGGAAGGA
TTGTTTCAGAACATTGAACCAATAGACGAGGAAATAGCCAAGCGCATTTGCCTCTTACTG
CTGGATGTTGCTTTACTTACTCGAAATGCAGCAAGATCAGCTGATGTGATCAGCTATGTG
GAGAAGGTTTTTTGTAGCAGTAGTTTATTGAGTCAAGTTGACAACGGAAACTCTGCACTG
CCAACAGCTTCAGCCGTTTTGAAATCGGCTTCATTTCCCAGCAATTCAACTATTCCTGAT
GCATCTACTCCAGATTCACCTGCTGCTGGGATAACCTCCGAAGGCTCTTTGTCTAGGACA
TTATCAGAAGAGGGACTTGAAGATCTACATTTAATATCATCCATGGAGATTGGTGGGCAG
AACCTACCACGACAGTCTGGCTTGAAATCTTCAAATGATCCAACAAGGAACCAAGCTGAT
GAATTTATCTCAACTGCTGAAATGAGGATTAAACTGCACCTTTGCAAGGTCCAATTTCTT
CTCCTCACCAGGAATCTTAAGGCAGCTAAGCGTGAAGTTAAGATGGCTATGAACACAGCA
CGGGGTAAAGATCATTCTATGGCTCTCTATTTGAAGTCCCAGCTTGAATATACTCGTGGG
AATCACCGAAAAGCAATCAAGCTCTTGATGGCATCAAGTAATCGGGCAGAAACAGGAATT
TCTAGCTTATACTACAACAACCTGGGTTGCATATATTATCGACTTGGCAAGCATCACACT
TCTTCTGTTTTTTTTGCCAAGGCTCTGAGTAATAGTTCATCTCTCCGGAAAGAGCGACCT
TTAAAGCTCTCAACCATCTCACAGGATAAGTCTCTTCTCATAACCTATAACTGTGGTATG
CAGTACCTGGCTTGTGGGAAACCATTGCTGGCTGCAGGCTGTTTCTATAAGGCTAGTCAG
GTTTTCCACAATAGGCCTCTTTTATGGTTACGAGTTGCAGAATGTTGTCTAATGGCCCTT
GAGCAGGGACTGCTCAAGTCCAGTGGTGTTGCTACTTCTGACAGGTCTGAAGTTAAAGTT
CATGTTGTTGGACAAGGAAAATGGAGGCAACTTGTTATAGAAGATGGAATATCAAGAAAT
GGACAAGAAAGTTTTTCAGGTAAGGAAGATTTGGCTACTAAGGGAAGACAACCGAAGTTA
TCGGTACTACTTGCTCGTCAGTGTCTTCTGAATGCTTTGCATTTATTGACCAGTTCTGAA
TCAAAAGGTAACAAGTCCACACAGTCTCATGCTTCTGGTCTGGAAGAAAGTGAAACAAGA
GAAGCAGTACCATCCAAGAATGGATCAACTGACCCTAAGTCACTGAACCTGCCAGCATCT
GGTCAGGTTAATGCAAATGGGGAGGTGAAAGAGCAAAAGGGTGCAAACAGTCAGAATGCC
GCCTTCTTGAATTCTCTTGGTGAGTATGAAGCCACATGTCGAAAAGAGAATCTGATGATT
GAGCAAGCTGCATTGGCTGATTTGGCTTTTGTAGAACTGGAATTGGGAAATGCATTGAAG
GCTCTTACAATTGCACGATCTCTCTTGAAAGTCCAAGAATGTTCTAGAATATACATCTTT
CTTGGTAATGTGTATGCTGCTGAAGCTCTATGCTTGCTGAACCGGGCAAAGGAAGCTGCA
GAGCATTTGTCAACCTATATCTCCAGTGGCAAGGATGTTGATCTGCCCTTTAGTGAAGAG
GATTCTGAAATGTGGAAACAGGAGAAAACATTGGAATCGGAAGATACTAATGTTGGATCA
GCTGCTGTGAACTCCTTTCCTTCAGAGGAATCTCAAGCATTTGTGTTTGTTAAGCCAGAA
GAGTCCCGCGGAATTCTCTTCGCAAACTTAGCTGCCATGTCTGCTATGCTAGGAGACATT
GAACAGGCCCAAACTTATGTGGTACAAGCACTTTTGATAAAACCTCAACGTCCTGAAGCT
ATTCTTACTGCAGTATACGTGGATCTTCTGTGTGGGAAGACACAAGAAGCTCTCACAAAG
TTGAAACAGTGTAGTCGTATTAGGTTCCTACCAGGCAGTCCGACTTTAAGTGGTTCATCA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400053836
PEP Infomation

pacid=37432136 transcript=PGSC0003DMT400079398 locus=PGSC0003DMG400030907 ID=PGSC0003DMT400079398.v4.03 annot-version=v4.03
Sequence

MDTMSSSASNAVANNKDVPSSMTPTAVEDDGAMSVNSGLAKEAALFFQSGNYADCVRVLY
QLLQKKEGDPKVLHNIAIAVNFQDGCSNPKKLIDELNNAKKRSEELACAAGDQADPASNG
GAKAVTGISGNNSAPRHLSAQHSSELVYADEFDPSVTTYNLAVCWFHLHEHAKAFSILEG
LFQNIEPIDEEIAKRICLLLLDVALLTRNAARSADVISYVEKVFCSSSLLSQVDNGNSAL
PTASAVLKSASFPSNSTIPDASTPDSPAAGITSEGSLSRTLSEEGLEDLHLISSMEIGGQ
NLPRQSGLKSSNDPTRNQADEFISTAEMRIKLHLCKVQFLLLTRNLKAAKREVKMAMNTA
RGKDHSMALYLKSQLEYTRGNHRKAIKLLMASSNRAETGISSLYYNNLGCIYYRLGKHHT
SSVFFAKALSNSSSLRKERPLKLSTISQDKSLLITYNCGMQYLACGKPLLAAGCFYKASQ
VFHNRPLLWLRVAECCLMALEQGLLKSSGVATSDRSEVKVHVVGQGKWRQLVIEDGISRN
GQESFSGKEDLATKGRQPKLSVLLARQCLLNALHLLTSSESKGNKSTQSHASGLEESETR
EAVPSKNGSTDPKSLNLPASGQVNANGEVKEQKGANSQNAAFLNSLGEYEATCRKENLMI
EQAALADLAFVELELGNALKALTIARSLLKVQECSRIYIFLGNVYAAEALCLLNRAKEAA
EHLSTYISSGKDVDLPFSEEDSEMWKQEKTLESEDTNVGSAAVNSFPSEESQAFVFVKPE
ESRGILFANLAAMSAMLGDIEQAQTYVVQALLIKPQRPEAILTAVYVDLLCGKTQEALTK
LKQCSRIRFLPGSPTLSGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400079398
Transcript Infomation

pacid=37432136 locus=PGSC0003DMG400030907 ID=PGSC0003DMT400079398.v4.03 annot-version=v4.03
Sequence

ATGGATACGATGTCGTCTTCAGCGTCAAATGCAGTAGCGAATAACAAGGATGTTCCGTCT
TCGATGACGCCGACCGCGGTGGAGGATGACGGCGCGATGTCTGTCAATTCAGGACTTGCA
AAGGAGGCAGCTTTGTTTTTTCAGTCGGGAAATTACGCTGATTGTGTTAGAGTTTTGTAT
CAACTGTTGCAGAAAAAAGAAGGCGATCCAAAGGTTCTACATAACATTGCGATTGCTGTG
AACTTTCAAGATGGTTGCTCCAATCCTAAGAAGCTGATTGATGAACTTAATAATGCTAAG
AAAAGAAGCGAAGAGCTTGCTTGTGCTGCTGGCGACCAGGCAGATCCTGCTAGCAATGGT
GGAGCCAAAGCTGTGACAGGAATTAGTGGAAATAACAGTGCACCACGGCATCTATCTGCT
CAACATAGTTCCGAACTTGTTTATGCTGATGAGTTTGATCCCTCAGTGACCACATACAAT
CTAGCAGTTTGCTGGTTTCATTTGCATGAACATGCAAAAGCATTTTCAATTTTGGAAGGA
TTGTTTCAGAACATTGAACCAATAGACGAGGAAATAGCCAAGCGCATTTGCCTCTTACTG
CTGGATGTTGCTTTACTTACTCGAAATGCAGCAAGATCAGCTGATGTGATCAGCTATGTG
GAGAAGGTTTTTTGTAGCAGTAGTTTATTGAGTCAAGTTGACAACGGAAACTCTGCACTG
CCAACAGCTTCAGCCGTTTTGAAATCGGCTTCATTTCCCAGCAATTCAACTATTCCTGAT
GCATCTACTCCAGATTCACCTGCTGCTGGGATAACCTCCGAAGGCTCTTTGTCTAGGACA
TTATCAGAAGAGGGACTTGAAGATCTACATTTAATATCATCCATGGAGATTGGTGGGCAG
AACCTACCACGACAGTCTGGCTTGAAATCTTCAAATGATCCAACAAGGAACCAAGCTGAT
GAATTTATCTCAACTGCTGAAATGAGGATTAAACTGCACCTTTGCAAGGTCCAATTTCTT
CTCCTCACCAGGAATCTTAAGGCAGCTAAGCGTGAAGTTAAGATGGCTATGAACACAGCA
CGGGGTAAAGATCATTCTATGGCTCTCTATTTGAAGTCCCAGCTTGAATATACTCGTGGG
AATCACCGAAAAGCAATCAAGCTCTTGATGGCATCAAGTAATCGGGCAGAAACAGGAATT
TCTAGCTTATACTACAACAACCTGGGTTGCATATATTATCGACTTGGCAAGCATCACACT
TCTTCTGTTTTTTTTGCCAAGGCTCTGAGTAATAGTTCATCTCTCCGGAAAGAGCGACCT
TTAAAGCTCTCAACCATCTCACAGGATAAGTCTCTTCTCATAACCTATAACTGTGGTATG
CAGTACCTGGCTTGTGGGAAACCATTGCTGGCTGCAGGCTGTTTCTATAAGGCTAGTCAG
GTTTTCCACAATAGGCCTCTTTTATGGTTACGAGTTGCAGAATGTTGTCTAATGGCCCTT
GAGCAGGGACTGCTCAAGTCCAGTGGTGTTGCTACTTCTGACAGGTCTGAAGTTAAAGTT
CATGTTGTTGGACAAGGAAAATGGAGGCAACTTGTTATAGAAGATGGAATATCAAGAAAT
GGACAAGAAAGTTTTTCAGGTAAGGAAGATTTGGCTACTAAGGGAAGACAACCGAAGTTA
TCGGTACTACTTGCTCGTCAGTGTCTTCTGAATGCTTTGCATTTATTGACCAGTTCTGAA
TCAAAAGGTAACAAGTCCACACAGTCTCATGCTTCTGGTCTGGAAGAAAGTGAAACAAGA
GAAGCAGTACCATCCAAGAATGGATCAACTGACCCTAAGTCACTGAACCTGCCAGCATCT
GGTCAGGTTAATGCAAATGGGGAGGTGAAAGAGCAAAAGGGTGCAAACAGTCAGAATGCC
GCCTTCTTGAATTCTCTTGGTGAGTATGAAGCCACATGTCGAAAAGAGAATCTGATGATT
GAGCAAGCTGCATTGGCTGATTTGGCTTTTGTAGAACTGGAATTGGGAAATGCATTGAAG
GCTCTTACAATTGCACGATCTCTCTTGAAAGTCCAAGAATGTTCTAGAATATACATCTTT
CTTGGTAATGTGTATGCTGCTGAAGCTCTATGCTTGCTGAACCGGGCAAAGGAAGCTGCA
GAGCATTTGTCAACCTATATCTCCAGTGGCAAGGATGTTGATCTGCCCTTTAGTGAAGAG
GATTCTGAAATGTGGAAACAGGAGAAAACATTGGAATCGGAAGATACTAATGTTGGATCA
GCTGCTGTGAACTCCTTTCCTTCAGAGGAATCTCAAGCATTTGTGTTTGTTAAGCCAGAA
GAGTCCCGCGGAATTCTCTTCGCAAACTTAGCTGCCATGTCTGCTATGCTAGGAGACATT
GAACAGGCCCAAACTTATGTGGTACAAGCACTTTTGATAAAACCTCAACGTCCTGAAGCT
ATTCTTACTGCAGTATACGTGGATCTTCTGTGTGGGAAGACACAAGAAGCTCTCACAAAG
TTGAAACAGTGTAGTCGTATTAGGTTCCTACCAGGCAGTCCGACTTTAAGTGGTTCATCA
TGA