Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079380
CDS Infomation

pacid=37433537 polypeptide=PGSC0003DMP400053824 locus=PGSC0003DMG400030899 ID=PGSC0003DMT400079380.v4.03 annot-version=v4.03
Sequence

ATGGCTATGAGTATTAGGAAGGCAATTGGAGCAGTGAAAGATCAAACTAGTATAAGCCTA
GCTAAAGTGACCAGCAATGTTGCGCCGGACCTTGAAGTATTGGTGGTGAAAGCAACCACT
CATGATAATGATCCAGCAGATGAGAAATATATTAGGGAGATTTTGCACTTGACCTCTAAT
TCTCGAGGGTATGTTAGTGCTTTTGTTTTTGCAGTGTCAAAGAGGTTAAGCAAAACCCAT
GATTGGGTTGTGGCGTTGAAGGCCTTAGTGCTTGTGCATAGGCTATTAACTGATGGAGAC
CCTGTACTTGGTCAAGAGATCATGTATGCAAGTCGGAGAGGGATGAGGGTTTTGAATATG
TCTGGTTTTCGTGATGAAGCGCACTCTAATTCCTGGGATCATTCTGGATTCGTTAGGACT
TATGCCATTTATTTAGATCAGAAGCTTGAGTTTTCTACTTATGATAGGAAGTTGAATGAC
GGTGATGGTTATGGTCAGTATCGGTCCGATGGACATGGGATGGATAGGAGAAAGAGGTTC
TTTAATGAGCCTGATGAGTCTGCTGGAAGGGAAGAGAAAAGTGGGGTGACGCCAGCCAGA
GAAATGAAGCCTGAGAAGGTTTTAGAGAGGTTGAATCAATTGCTTCAGCTTCTTGATAGG
TTCTTGGCTTGTAGACCGACTGGTGCAGCCAAGGATAGTAGGATGGTGCTGGCGGCATTA
TATTCTCTTGTGAAGGAGAGCTTCAAGCTTTATGCTGATATTTGTGAGGTATTACATAAT
TTGTTGGATCGATTCGCAGAGATGGAGTATGCTGATTGTGTCAAGACTTTTGATGCTTAT
GTTAGTGCAGCAAAGATGATCGATGAGCTTGTGGGCACTTACAATTGGTGCAAGGATGTT
GGGATTGCAAGGTCATCCGAGTTCCCAGAAGTGCAAGTCATCACTGATAAGCTTTTGGGC
ACACTTGAGGCCTTCTTGAGAGAGAGGGCAAATAGGCCAAGGAGCCCTGAGATAAATAGG
GTGGAGAGTTCGTCAGCAGTTAAAGAGGAGAAAACACCAGATATGAACGAAATTAAAGCT
CTCCCACCACCCGAGAATCACACACCTCCTCCTCCTGCTCCTCCTCAACCTGTACCACAG
CCAAGGCCACATGCTCAGCAGGTAACTGAAGACTTGGTGAATTTGAAGGATGATGGAGTG
ACAGCTGATGGTGAGGGCAATAAAATGGCATTAGCTCTATTTTCTGGGCCTGTAGCCAAG
GGGAATGGCTCCTGGGAAGCATTCCCGTCTGATGGAGAGACTGGACAAGTAACTTCAGCT
TGGCAGACACCAGCTGCTGAGATTGGCAAAGCTGACTGGGAGTTAGCATTGGTAGAAACC
GCCAGTAATTTGTCAAAGCAGACGGCTGATTTAGCAGGTGGTTTTGATTCACTTTTGTTA
AACGGGATGTACGATCAGGGAACCGTGAGGCAGCACGTGAGCAATACTCAGGTGACTGGT
GGGAGTGCCAGCAGTGTAGCATTGCCTGGAGTGGGAAAGACTGCAACACCTATGCTTGCG
TTACCTGCCCCTGATGGAACAGTCCAACCAGTAGGGAACCAAGATCCATTTGCTGCTTCC
CTAGCTGTGCCACCTCCTTCTTACGTCCAAATGGCTGAACAGGAGAGGAAACAGCATTTG
TTAATGCAGGAACAACAGCTGTGGCAGCAATACGCAAGCAACGGGATGCAAGGCCAAATG
GGTTTGTCCAGACTTGCAGGGGCTACCCCAGGCTACTATGGCAGTGGAATGCCACCATCA
ATGCCCTATGGGATGGGACAGCCAGCAGGTTATTACTTCACTCCCCTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053824
PEP Infomation

pacid=37433537 transcript=PGSC0003DMT400079380 locus=PGSC0003DMG400030899 ID=PGSC0003DMT400079380.v4.03 annot-version=v4.03
Sequence

MAMSIRKAIGAVKDQTSISLAKVTSNVAPDLEVLVVKATTHDNDPADEKYIREILHLTSN
SRGYVSAFVFAVSKRLSKTHDWVVALKALVLVHRLLTDGDPVLGQEIMYASRRGMRVLNM
SGFRDEAHSNSWDHSGFVRTYAIYLDQKLEFSTYDRKLNDGDGYGQYRSDGHGMDRRKRF
FNEPDESAGREEKSGVTPAREMKPEKVLERLNQLLQLLDRFLACRPTGAAKDSRMVLAAL
YSLVKESFKLYADICEVLHNLLDRFAEMEYADCVKTFDAYVSAAKMIDELVGTYNWCKDV
GIARSSEFPEVQVITDKLLGTLEAFLRERANRPRSPEINRVESSSAVKEEKTPDMNEIKA
LPPPENHTPPPPAPPQPVPQPRPHAQQVTEDLVNLKDDGVTADGEGNKMALALFSGPVAK
GNGSWEAFPSDGETGQVTSAWQTPAAEIGKADWELALVETASNLSKQTADLAGGFDSLLL
NGMYDQGTVRQHVSNTQVTGGSASSVALPGVGKTATPMLALPAPDGTVQPVGNQDPFAAS
LAVPPPSYVQMAEQERKQHLLMQEQQLWQQYASNGMQGQMGLSRLAGATPGYYGSGMPPS
MPYGMGQPAGYYFTPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400079380
Transcript Infomation

pacid=37433537 locus=PGSC0003DMG400030899 ID=PGSC0003DMT400079380.v4.03 annot-version=v4.03
Sequence

ATGGCTATGAGTATTAGGAAGGCAATTGGAGCAGTGAAAGATCAAACTAGTATAAGCCTA
GCTAAAGTGACCAGCAATGTTGCGCCGGACCTTGAAGTATTGGTGGTGAAAGCAACCACT
CATGATAATGATCCAGCAGATGAGAAATATATTAGGGAGATTTTGCACTTGACCTCTAAT
TCTCGAGGGTATGTTAGTGCTTTTGTTTTTGCAGTGTCAAAGAGGTTAAGCAAAACCCAT
GATTGGGTTGTGGCGTTGAAGGCCTTAGTGCTTGTGCATAGGCTATTAACTGATGGAGAC
CCTGTACTTGGTCAAGAGATCATGTATGCAAGTCGGAGAGGGATGAGGGTTTTGAATATG
TCTGGTTTTCGTGATGAAGCGCACTCTAATTCCTGGGATCATTCTGGATTCGTTAGGACT
TATGCCATTTATTTAGATCAGAAGCTTGAGTTTTCTACTTATGATAGGAAGTTGAATGAC
GGTGATGGTTATGGTCAGTATCGGTCCGATGGACATGGGATGGATAGGAGAAAGAGGTTC
TTTAATGAGCCTGATGAGTCTGCTGGAAGGGAAGAGAAAAGTGGGGTGACGCCAGCCAGA
GAAATGAAGCCTGAGAAGGTTTTAGAGAGGTTGAATCAATTGCTTCAGCTTCTTGATAGG
TTCTTGGCTTGTAGACCGACTGGTGCAGCCAAGGATAGTAGGATGGTGCTGGCGGCATTA
TATTCTCTTGTGAAGGAGAGCTTCAAGCTTTATGCTGATATTTGTGAGGTATTACATAAT
TTGTTGGATCGATTCGCAGAGATGGAGTATGCTGATTGTGTCAAGACTTTTGATGCTTAT
GTTAGTGCAGCAAAGATGATCGATGAGCTTGTGGGCACTTACAATTGGTGCAAGGATGTT
GGGATTGCAAGGTCATCCGAGTTCCCAGAAGTGCAAGTCATCACTGATAAGCTTTTGGGC
ACACTTGAGGCCTTCTTGAGAGAGAGGGCAAATAGGCCAAGGAGCCCTGAGATAAATAGG
GTGGAGAGTTCGTCAGCAGTTAAAGAGGAGAAAACACCAGATATGAACGAAATTAAAGCT
CTCCCACCACCCGAGAATCACACACCTCCTCCTCCTGCTCCTCCTCAACCTGTACCACAG
CCAAGGCCACATGCTCAGCAGGTAACTGAAGACTTGGTGAATTTGAAGGATGATGGAGTG
ACAGCTGATGGTGAGGGCAATAAAATGGCATTAGCTCTATTTTCTGGGCCTGTAGCCAAG
GGGAATGGCTCCTGGGAAGCATTCCCGTCTGATGGAGAGACTGGACAAGTAACTTCAGCT
TGGCAGACACCAGCTGCTGAGATTGGCAAAGCTGACTGGGAGTTAGCATTGGTAGAAACC
GCCAGTAATTTGTCAAAGCAGACGGCTGATTTAGCAGGTGGTTTTGATTCACTTTTGTTA
AACGGGATGTACGATCAGGGAACCGTGAGGCAGCACGTGAGCAATACTCAGGTGACTGGT
GGGAGTGCCAGCAGTGTAGCATTGCCTGGAGTGGGAAAGACTGCAACACCTATGCTTGCG
TTACCTGCCCCTGATGGAACAGTCCAACCAGTAGGGAACCAAGATCCATTTGCTGCTTCC
CTAGCTGTGCCACCTCCTTCTTACGTCCAAATGGCTGAACAGGAGAGGAAACAGCATTTG
TTAATGCAGGAACAACAGCTGTGGCAGCAATACGCAAGCAACGGGATGCAAGGCCAAATG
GGTTTGTCCAGACTTGCAGGGGCTACCCCAGGCTACTATGGCAGTGGAATGCCACCATCA
ATGCCCTATGGGATGGGACAGCCAGCAGGTTATTACTTCACTCCCCTCTGA