Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079343
CDS Infomation

pacid=37468073 polypeptide=PGSC0003DMP400053796 locus=PGSC0003DMG402030883 ID=PGSC0003DMT400079343.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTGTAGTTAAAGTTCTGATAGACAATCTTACTTCTTTCCTCAAAGGGGAA
ATTGCATTGCTTTTCGGTTTTGAAAATGAATTCCAAAGGCTTTCAAGCATGTTTTCTACA
ATCCAAGCCGTCCTTGAAGATGCTCAGGAGAAGCAACTCAACGACAAACCACTAGAAAAT
TGGTTGCAAAAACTCAATGTTGCTACGTATGAAGTCGATGACATCTTGGATGAATATAAA
ACTAAGGCCACACGATTCTCCCAGTCTGCATATGGCTGTTATCATCCAAAGGTTATCCCT
TTCCGTCACAAGGTCGGGAAAAGGATGGACCAAGTGATGAAAAAACTACATGCAATTGCA
GAGGAAAGAAAGAATTTTCATTTGCACGAAAAGATTATAGAGAGACAAGTTGTCAAACGG
GAAACAGGTTCTGTTTTAACTGAACCACAAGTTTATGGAAGGGACAAAGAAAAGGACGAG
ATAGTGAAAATCCTGATAAACAATGTTAGTGATGCTCAAGAACTTTCAGTCCTCCCAATA
GTTGGTATGGGGGGACTAGGAAAGACGACTCTTGCCCAAATGGTCTTCAATGATCAGACA
GTAACTGAGCATTTATATCCCAAAATATGGATTTGTGTCTCCAATGATTTTGATGAGAAG
AGGTTGATAAAGGCAATCATAGAATCTATTGAAGGGAAGTCACTCAGTGACATGGACTTG
GCTCCACTTCAAAAGAAGCTTCAAGAGTTGCTGAATGGAAAAAGATACTTGCTTGTCTTA
GATGATGTTTGGAATGAAGATCAACAGAAGTGGGCTAATTTAAGAGCAGTCTTGAAGGTT
GGAGCAAGTGGTGCTTCTGTTCTAACCACTACTCGTCTCGAAAAGGTTGGATCAATTATG
GGAACACTGCAACCATATGAATTGTCAAATCTGTCCCAAGAAGATTGTTGGTTGTTGCTC
ATGCAACGTGCATTTGGATACCAAGAAGAAATAAATCCTAACCTGGTGGCTATCGGAATG
GAGATTGTGAAAAAATGTGGTGGTGTGCCTCTAGCAGCCAAGACTCTTGGAGCTAGCACA
TCAGGCAGCAATATCCGCGAAATAAATGTAAAAGGTTACTACTCACATAAGATGTCCATT
GGTTTTGCTAAAGTGGTTTCTTCTTACTCTCCTTCCCTCTTGAAAAGATTTGTCTCATTA
AGGGTGCTTAATCTAAGTAACTTAAAACTTGGTCAATTACCCTCTTCCATTGGAGACCTA
GTACACTTAAGATACTTGAACCTGTCTAGCAATAGCATGCGTAGTCTTCCAAAGCAGTTA
TGCAAGCTTCAAAATCTGCAGACTCTTGATCTACAGGATTGCCTGCCACTTCGTTGTTTG
CCAAAACAAACAAGTAAACTTGTTAGTCTCCGAAATCTTTTACTTGATCACAATTTATTG
AAATCTATGCCACCAAGGATAGGATCATTGACATGCCTTAAGACTCTAGGTCAATTTATT
GTTGGAAGGAAGAAAGAAAGTCTACAGTTATGGTGGGGGTCTGAGGATGTGGAGTATGTT
GAAGAAGTGGATATTGATGTTGATTCTGGATTCCCCACAAGAATAAGGTTTCCATCCTTG
AGGAAACTTGTTAAATGGGACTTTGGTAATCTGAAAGGATTGCTGAAAAAGGAAGGAGAA
GAGCAATTCCCTGTGCTTGAAGAGATGAAAATTCACGGGTGCCCTATGTTTGTTATTCCG
ACCCTTTCTTCTGTCAAGAAATTGAAAGTTCTTGGGGACAAGTCAGATGCAACAGTTTTG
AGGTCCATATGTAATCTCAGGGCTCTTACTTACCTCTACATTAGCATTAACTATGAAGCT
GCTTCACTCCCAGAAGAGATGTTCAAAAGCCTTGCAAATCTCTTTCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053796
PEP Infomation

pacid=37468073 transcript=PGSC0003DMT400079343 locus=PGSC0003DMG402030883 ID=PGSC0003DMT400079343.v4.03 annot-version=v4.03
Sequence

MAEAVVKVLIDNLTSFLKGEIALLFGFENEFQRLSSMFSTIQAVLEDAQEKQLNDKPLEN
WLQKLNVATYEVDDILDEYKTKATRFSQSAYGCYHPKVIPFRHKVGKRMDQVMKKLHAIA
EERKNFHLHEKIIERQVVKRETGSVLTEPQVYGRDKEKDEIVKILINNVSDAQELSVLPI
VGMGGLGKTTLAQMVFNDQTVTEHLYPKIWICVSNDFDEKRLIKAIIESIEGKSLSDMDL
APLQKKLQELLNGKRYLLVLDDVWNEDQQKWANLRAVLKVGASGASVLTTTRLEKVGSIM
GTLQPYELSNLSQEDCWLLLMQRAFGYQEEINPNLVAIGMEIVKKCGGVPLAAKTLGAST
SGSNIREINVKGYYSHKMSIGFAKVVSSYSPSLLKRFVSLRVLNLSNLKLGQLPSSIGDL
VHLRYLNLSSNSMRSLPKQLCKLQNLQTLDLQDCLPLRCLPKQTSKLVSLRNLLLDHNLL
KSMPPRIGSLTCLKTLGQFIVGRKKESLQLWWGSEDVEYVEEVDIDVDSGFPTRIRFPSL
RKLVKWDFGNLKGLLKKEGEEQFPVLEEMKIHGCPMFVIPTLSSVKKLKVLGDKSDATVL
RSICNLRALTYLYISINYEAASLPEEMFKSLANLFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400079343
Transcript Infomation

pacid=37468073 locus=PGSC0003DMG402030883 ID=PGSC0003DMT400079343.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGCTGTAGTTAAAGTTCTGATAGACAATCTTACTTCTTTCCTCAAAGGGGAA
ATTGCATTGCTTTTCGGTTTTGAAAATGAATTCCAAAGGCTTTCAAGCATGTTTTCTACA
ATCCAAGCCGTCCTTGAAGATGCTCAGGAGAAGCAACTCAACGACAAACCACTAGAAAAT
TGGTTGCAAAAACTCAATGTTGCTACGTATGAAGTCGATGACATCTTGGATGAATATAAA
ACTAAGGCCACACGATTCTCCCAGTCTGCATATGGCTGTTATCATCCAAAGGTTATCCCT
TTCCGTCACAAGGTCGGGAAAAGGATGGACCAAGTGATGAAAAAACTACATGCAATTGCA
GAGGAAAGAAAGAATTTTCATTTGCACGAAAAGATTATAGAGAGACAAGTTGTCAAACGG
GAAACAGGTTCTGTTTTAACTGAACCACAAGTTTATGGAAGGGACAAAGAAAAGGACGAG
ATAGTGAAAATCCTGATAAACAATGTTAGTGATGCTCAAGAACTTTCAGTCCTCCCAATA
GTTGGTATGGGGGGACTAGGAAAGACGACTCTTGCCCAAATGGTCTTCAATGATCAGACA
GTAACTGAGCATTTATATCCCAAAATATGGATTTGTGTCTCCAATGATTTTGATGAGAAG
AGGTTGATAAAGGCAATCATAGAATCTATTGAAGGGAAGTCACTCAGTGACATGGACTTG
GCTCCACTTCAAAAGAAGCTTCAAGAGTTGCTGAATGGAAAAAGATACTTGCTTGTCTTA
GATGATGTTTGGAATGAAGATCAACAGAAGTGGGCTAATTTAAGAGCAGTCTTGAAGGTT
GGAGCAAGTGGTGCTTCTGTTCTAACCACTACTCGTCTCGAAAAGGTTGGATCAATTATG
GGAACACTGCAACCATATGAATTGTCAAATCTGTCCCAAGAAGATTGTTGGTTGTTGCTC
ATGCAACGTGCATTTGGATACCAAGAAGAAATAAATCCTAACCTGGTGGCTATCGGAATG
GAGATTGTGAAAAAATGTGGTGGTGTGCCTCTAGCAGCCAAGACTCTTGGAGCTAGCACA
TCAGGCAGCAATATCCGCGAAATAAATGTAAAAGGTTACTACTCACATAAGATGTCCATT
GGTTTTGCTAAAGTGGTTTCTTCTTACTCTCCTTCCCTCTTGAAAAGATTTGTCTCATTA
AGGGTGCTTAATCTAAGTAACTTAAAACTTGGTCAATTACCCTCTTCCATTGGAGACCTA
GTACACTTAAGATACTTGAACCTGTCTAGCAATAGCATGCGTAGTCTTCCAAAGCAGTTA
TGCAAGCTTCAAAATCTGCAGACTCTTGATCTACAGGATTGCCTGCCACTTCGTTGTTTG
CCAAAACAAACAAGTAAACTTGTTAGTCTCCGAAATCTTTTACTTGATCACAATTTATTG
AAATCTATGCCACCAAGGATAGGATCATTGACATGCCTTAAGACTCTAGGTCAATTTATT
GTTGGAAGGAAGAAAGAAAGTCTACAGTTATGGTGGGGGTCTGAGGATGTGGAGTATGTT
GAAGAAGTGGATATTGATGTTGATTCTGGATTCCCCACAAGAATAAGGTTTCCATCCTTG
AGGAAACTTGTTAAATGGGACTTTGGTAATCTGAAAGGATTGCTGAAAAAGGAAGGAGAA
GAGCAATTCCCTGTGCTTGAAGAGATGAAAATTCACGGGTGCCCTATGTTTGTTATTCCG
ACCCTTTCTTCTGTCAAGAAATTGAAAGTTCTTGGGGACAAGTCAGATGCAACAGTTTTG
AGGTCCATATGTAATCTCAGGGCTCTTACTTACCTCTACATTAGCATTAACTATGAAGCT
GCTTCACTCCCAGAAGAGATGTTCAAAAGCCTTGCAAATCTCTTTCTTTAA