Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079318
CDS Infomation

pacid=37470137 polypeptide=PGSC0003DMP400053779 locus=PGSC0003DMG400030872 ID=PGSC0003DMT400079318.v4.03 annot-version=v4.03
Sequence

ATGGGAAATTGTATTCCTTCTCTACACAAAGAAATCAAATATTTGCCCATTGATACAATT
TTCAAGTTTCCATCTCCATTGCCCAATTGGCCACCAGGAACAGGAGATTTTGGAAGTGGA
TATATTGATTTAGGAGGGCTAAAAGTTTGCCAAATTGTGACATTTAACAAAGTTTGGGCT
ATTGATAAAGGAGGACCAGAGAATCTTGGAGCAACATTTTATGAGCCTTCACCAATTCCA
GATGGATTTTCTATGTTTGGATGTTATTGCCAACCAAACAATAAACCCCTTTTTGGTTGG
GTACTTGCAGGGAAAGACAATGTTGGGGAAATCCTAAAGAATCCAATTGATTACACACTT
GTTTGGAGTAGTGAATCCTCAAAATTCAAGAACACAAGTACCAATGATCATGGCTATATT
TGGCTACCAATCCCACCTGAGGGTTACAAGGCTTTAGGCCATGGTGTCACAACTTCACCT
GAAAAACCTGCCTTAGACAAAATCCAATGTGTTCGATCCGATCTAACGGATGATTTAGAG
GTTGAAAGTTGGGTATGGGGTCAAGGTACAACCAGTAAGGTGAATGGTATCAACGTTCAT
AGCGTGAGACCTCGAGAAAGGGGTGTAAAAGCACAAGGGGTTAGTGTAGGGACATTCTTA
GCTAGGATCACAAGTGATAAAGATGATGATTCTAACAAAACCCTATCCCTTGCTTGTTTA
AAGAATAATAAGTTTGATACCTTTTCTTCTATGCCTAACCTTAGCCAAATTCAAGCATTA
TTTGAACAATACTCTCCAATTATATACTTTCACCCTAAAGAAAAGTACCTACCTTCCTCT
GTCAATTGGTATTTTGCTAATGGTGCTTTGCTATACCAAAAAGGTCAAGAATCAAATCCT
AGTTCCATTGAACCAAATGGCTCAAATCTTCCACAAGATGGTCCAAATGATGGTGCTTAT
TGGCTAGACTTGCCAATTGATGAGAAGGACAAAGAGAAAGCTATTAAAGGAGATTTACTA
AACTCTGAGGTTTATCTCCACATTAAGCCAATGTTAGGGGCAACTTTCACAGACATAGCT
GTGTGGATTTTCTATCCATTCAATGGGCCTGGCACAGCTAAACTTGGCCTGGTAGATGTA
CCCTTTGGTAAAATAGGCGAACACGTAGGTGATTGGGAACATGTAACACTTAGGATCAGC
AATTTCAATGGGGTGTTGTACAAAGTTTACGTCTCGCAACATAGTGGAGGGACATGGATT
GATGCACCACAAGTTGAATTTCAAAATGGTAGTAACAAAGTTGTGGTCTATTCTTCACTA
AATGGACATGCCATTTACCATAAACCAGGCTTAGTTTTACAAGGGGGTGGAGATATTGGG
ATAAGAAATGATACAACTAAGAGTAACTTGGTTTTGGATTGTGGGAAGAATTATTCAATA
GTTGCTGCTGAAAATCTTGAAATAATCGCACCAGCATGGCTAAATTATACAAGAGAATGG
GGACCAAAGTTAAGTTATACACTTGGGGATGAAGTTAAGAAAATTGAGAGTTCATTGAAA
GGGAACTTGAAAGGTGCATTTGAGAAATTGGTGAAAGTATTGCCAAATGAAGTTTATGGA
GAAGAAGGGCCTACTGGTCCCAAGATGAAAGGTAATTGGAATGGGGATGAAGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053779
PEP Infomation

pacid=37470137 transcript=PGSC0003DMT400079318 locus=PGSC0003DMG400030872 ID=PGSC0003DMT400079318.v4.03 annot-version=v4.03
Sequence

MGNCIPSLHKEIKYLPIDTIFKFPSPLPNWPPGTGDFGSGYIDLGGLKVCQIVTFNKVWA
IDKGGPENLGATFYEPSPIPDGFSMFGCYCQPNNKPLFGWVLAGKDNVGEILKNPIDYTL
VWSSESSKFKNTSTNDHGYIWLPIPPEGYKALGHGVTTSPEKPALDKIQCVRSDLTDDLE
VESWVWGQGTTSKVNGINVHSVRPRERGVKAQGVSVGTFLARITSDKDDDSNKTLSLACL
KNNKFDTFSSMPNLSQIQALFEQYSPIIYFHPKEKYLPSSVNWYFANGALLYQKGQESNP
SSIEPNGSNLPQDGPNDGAYWLDLPIDEKDKEKAIKGDLLNSEVYLHIKPMLGATFTDIA
VWIFYPFNGPGTAKLGLVDVPFGKIGEHVGDWEHVTLRISNFNGVLYKVYVSQHSGGTWI
DAPQVEFQNGSNKVVVYSSLNGHAIYHKPGLVLQGGGDIGIRNDTTKSNLVLDCGKNYSI
VAAENLEIIAPAWLNYTREWGPKLSYTLGDEVKKIESSLKGNLKGAFEKLVKVLPNEVYG
EEGPTGPKMKGNWNGDEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400079318
Transcript Infomation

pacid=37470137 locus=PGSC0003DMG400030872 ID=PGSC0003DMT400079318.v4.03 annot-version=v4.03
Sequence

ATGGGAAATTGTATTCCTTCTCTACACAAAGAAATCAAATATTTGCCCATTGATACAATT
TTCAAGTTTCCATCTCCATTGCCCAATTGGCCACCAGGAACAGGAGATTTTGGAAGTGGA
TATATTGATTTAGGAGGGCTAAAAGTTTGCCAAATTGTGACATTTAACAAAGTTTGGGCT
ATTGATAAAGGAGGACCAGAGAATCTTGGAGCAACATTTTATGAGCCTTCACCAATTCCA
GATGGATTTTCTATGTTTGGATGTTATTGCCAACCAAACAATAAACCCCTTTTTGGTTGG
GTACTTGCAGGGAAAGACAATGTTGGGGAAATCCTAAAGAATCCAATTGATTACACACTT
GTTTGGAGTAGTGAATCCTCAAAATTCAAGAACACAAGTACCAATGATCATGGCTATATT
TGGCTACCAATCCCACCTGAGGGTTACAAGGCTTTAGGCCATGGTGTCACAACTTCACCT
GAAAAACCTGCCTTAGACAAAATCCAATGTGTTCGATCCGATCTAACGGATGATTTAGAG
GTTGAAAGTTGGGTATGGGGTCAAGGTACAACCAGTAAGGTGAATGGTATCAACGTTCAT
AGCGTGAGACCTCGAGAAAGGGGTGTAAAAGCACAAGGGGTTAGTGTAGGGACATTCTTA
GCTAGGATCACAAGTGATAAAGATGATGATTCTAACAAAACCCTATCCCTTGCTTGTTTA
AAGAATAATAAGTTTGATACCTTTTCTTCTATGCCTAACCTTAGCCAAATTCAAGCATTA
TTTGAACAATACTCTCCAATTATATACTTTCACCCTAAAGAAAAGTACCTACCTTCCTCT
GTCAATTGGTATTTTGCTAATGGTGCTTTGCTATACCAAAAAGGTCAAGAATCAAATCCT
AGTTCCATTGAACCAAATGGCTCAAATCTTCCACAAGATGGTCCAAATGATGGTGCTTAT
TGGCTAGACTTGCCAATTGATGAGAAGGACAAAGAGAAAGCTATTAAAGGAGATTTACTA
AACTCTGAGGTTTATCTCCACATTAAGCCAATGTTAGGGGCAACTTTCACAGACATAGCT
GTGTGGATTTTCTATCCATTCAATGGGCCTGGCACAGCTAAACTTGGCCTGGTAGATGTA
CCCTTTGGTAAAATAGGCGAACACGTAGGTGATTGGGAACATGTAACACTTAGGATCAGC
AATTTCAATGGGGTGTTGTACAAAGTTTACGTCTCGCAACATAGTGGAGGGACATGGATT
GATGCACCACAAGTTGAATTTCAAAATGGTAGTAACAAAGTTGTGGTCTATTCTTCACTA
AATGGACATGCCATTTACCATAAACCAGGCTTAGTTTTACAAGGGGGTGGAGATATTGGG
ATAAGAAATGATACAACTAAGAGTAACTTGGTTTTGGATTGTGGGAAGAATTATTCAATA
GTTGCTGCTGAAAATCTTGAAATAATCGCACCAGCATGGCTAAATTATACAAGAGAATGG
GGACCAAAGTTAAGTTATACACTTGGGGATGAAGTTAAGAAAATTGAGAGTTCATTGAAA
GGGAACTTGAAAGGTGCATTTGAGAAATTGGTGAAAGTATTGCCAAATGAAGTTTATGGA
GAAGAAGGGCCTACTGGTCCCAAGATGAAAGGTAATTGGAATGGGGATGAAGTGTGA