Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079314
CDS Infomation

pacid=37467846 polypeptide=PGSC0003DMP400053775 locus=PGSC0003DMG400030870 ID=PGSC0003DMT400079314.v4.03 annot-version=v4.03
Sequence

ATGGCAGTCACGGGCGGCCAAGACGGAAACGGTAGTATACTGGTGCTTGTCGAGGATGTT
ATGGTACCAGTTAGTGTGGTATACAATGCAATCAATATCTTGAAGAAAGAGGGAGTTGAG
AAGTTGGACCCAATGATTGTTACTCAAGCTTCAACCCAGAGTCTGACACCAGTGGAGTCT
GCATCTATGGATGTTGTTGCTCTCATCTGTAGGTCCCTTGAGTTTCCTAGTGATAAATTG
TGTGGGGACATCTCAAGAGTGTTGAAGCCTGGTGGAACAGTCCTACTTAGCCTAAGTTCT
CAATCAGTCTCGAAGGAAAAATCCACCCATGACCGCAAGTTATTATTGGCTGGATTCTCT
GATACACAGTCATTTGAAGCTGGCCACTCTATCGTGATAACAGCAAAGAAACCTTCATGG
AAGGTTGGTTCATCCTTTTCTATCAAGAAAGTCGCAAAAAGTTTACCGAAAGTTCAGATT
GTTGATGATTCAGATCTCATTGATGAGGATAGCCTTCTCACTGAGGAAGATCTGAAGAAA
CCACAATTGCCAAGTGTTGATGACTGTGAAGTTGGAAAAACAAAGAAAGCATGCAAAAAT
TGTACGTGCGGACGGGCTGAAGCTGAGACAAAAGTGCAACTTGGACCAACTGCTGAACAA
CTGAACAATCCTCAATCTGCCTGTGGCAGTTGTGGCCTTGGTGATGCTTTCCGCTGCAGT
ACATGCCCTTATAAGGGTCTTCCTCCATTCAAACTTGGTGAAAAGGTAACGCTTTCTGCA
AACTTTCTTGACGCTGACATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053775
PEP Infomation

pacid=37467846 transcript=PGSC0003DMT400079314 locus=PGSC0003DMG400030870 ID=PGSC0003DMT400079314.v4.03 annot-version=v4.03
Sequence

MAVTGGQDGNGSILVLVEDVMVPVSVVYNAINILKKEGVEKLDPMIVTQASTQSLTPVES
ASMDVVALICRSLEFPSDKLCGDISRVLKPGGTVLLSLSSQSVSKEKSTHDRKLLLAGFS
DTQSFEAGHSIVITAKKPSWKVGSSFSIKKVAKSLPKVQIVDDSDLIDEDSLLTEEDLKK
PQLPSVDDCEVGKTKKACKNCTCGRAEAETKVQLGPTAEQLNNPQSACGSCGLGDAFRCS
TCPYKGLPPFKLGEKVTLSANFLDADI*

Transcript Sequence

Transcript ID

PGSC0003DMT400079314
Transcript Infomation

pacid=37467846 locus=PGSC0003DMG400030870 ID=PGSC0003DMT400079314.v4.03 annot-version=v4.03
Sequence

ATGGCAGTCACGGGCGGCCAAGACGGAAACGGTAGTATACTGGTGCTTGTCGAGGATGTT
ATGGTACCAGTTAGTGTGGTATACAATGCAATCAATATCTTGAAGAAAGAGGGAGTTGAG
AAGTTGGACCCAATGATTGTTACTCAAGCTTCAACCCAGAGTCTGACACCAGTGGAGTCT
GCATCTATGGATGTTGTTGCTCTCATCTGTAGGTCCCTTGAGTTTCCTAGTGATAAATTG
TGTGGGGACATCTCAAGAGTGTTGAAGCCTGGTGGAACAGTCCTACTTAGCCTAAGTTCT
CAATCAGTCTCGAAGGAAAAATCCACCCATGACCGCAAGTTATTATTGGCTGGATTCTCT
GATACACAGTCATTTGAAGCTGGCCACTCTATCGTGATAACAGCAAAGAAACCTTCATGG
AAGGTTGGTTCATCCTTTTCTATCAAGAAAGTCGCAAAAAGTTTACCGAAAGTTCAGATT
GTTGATGATTCAGATCTCATTGATGAGGATAGCCTTCTCACTGAGGAAGATCTGAAGAAA
CCACAATTGCCAAGTGTTGATGACTGTGAAGTTGGAAAAACAAAGAAAGCATGCAAAAAT
TGTACGTGCGGACGGGCTGAAGCTGAGACAAAAGTGCAACTTGGACCAACTGCTGAACAA
CTGAACAATCCTCAATCTGCCTGTGGCAGTTGTGGCCTTGGTGATGCTTTCCGCTGCAGT
ACATGCCCTTATAAGGGTCTTCCTCCATTCAAACTTGGTGAAAAGGTAACGCTTTCTGCA
AACTTTCTTGACGCTGACATCTAA