Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079286
CDS Infomation

pacid=37469056 polypeptide=PGSC0003DMP400053757 locus=PGSC0003DMG401030861 ID=PGSC0003DMT400079286.v4.03 annot-version=v4.03
Sequence

ATGAAGCACAAAGATGGAAAACCATATCCACCAAATAAAAATTCAAAGAAAATTCAAGTG
ACACTAATAGTTGTGGTGCTCTGTGGGTTTTCATTCTATCTTGGAGGAATTTTTTGTTCT
GAAAAGGAGACATATGCAACTAAGGAGGTTAACAGGGAGGATGAAACTCCCATAGGGAAT
TCAGCTGGCTCTCTACAAACCAGAGGCAATTCCTTTACTGAATGCAGTGCTGACTATCAG
GACTATACCCCATGCACAGATCCGAGGAGATGGAAGAAGTACGGTCTTCATCGCCTTACT
TTCATGGAACGACATTGCCCTCCTAATTTTGAAAGGAAGGAATGCTTGGTTCCTCCACCA
GATGGCTATAAGGTGCCAATAAGATGGCCAAAGAGCAAAAATGAATGTTGGTACAGGAAT
GTTCCATATGATTGGATTAACAAACAAAAATCCAATCAACATTGGCTCGTAAAAGAAGGG
GAGAAGTTTATCTTTCCTGGTGGTGGTACTATGTTCCCAAATGGTGTTGGGAAATATGTT
GATCTGATGGAAGATTTGATTCCACAAATGAAAGATGGCACCGTCCGAACTGCCATTGAT
ACTGGTTGTGGGGTGGCAAGCTGGGGAGGCGATCTACTAGATCGTGGAATTCTGACAGTC
TCTCTTGCTCCAAGAGATAATCACGAAGCTCAAGTTCAGTTTGCTCTGGAACGTGGAATT
CCTGCAGTTCTGGGCATTATTTCGACACAGCGTCTTCCTTTCCCTTCAAACTCTTTTGAC
ATGGCTCATTGCTCAAGATGCCTAATTCCATGGACTGAATTTGGTGGAGTTTACCTTCTT
GAAGTACATCGTATACTGCGTCCTGGAGGTTTCTGGGTCCTTTCTGGCCCACCAGTGAAC
TATGAGAACCGTTGGAGAGGATGGAACACCACCATTGAGGAGCAGAGATCAGATTACGAG
AAGTTGCAAGATTTGCTAACTTCGATGTGCTTCAAATTATTTAACAAGAAGGATGACATT
GCCGTGTGGCAGAAGTTGACAGACAATAGCTGCTATAAGAAACTTGATAACCTTGATAAC
TACCCACCAAAATGTGATGATGGTACTGAACCTGATTCCGCGTGGTACACTCCTCTCCGA
CCTTGTGTAGTTGTGCCTCCAGCTACTAGGAAAGTTAAGTTGAATGCCCTAGCCAAATGG
CCAGAAAGGTTGCATGTCGCCCCAGAACGTGTTTCTGATATTCGTGGAGGTAGCGAGGGT
GCCTTCAAGCATGACGATAGTAAGTGGAAGGTGCGAGCAAAGCACTATAAGAAGTTGCTC
CCTGCTATTGGAACTGAAAAGGTCAGGAATGTGATGGACATGAACACCTTGTACGGAGGT
TTCGCTGCTGCTCTGGTTGAGGATCCACTTTGGGTCATGAATGTGGTCTCCTCTTATGCT
GCCAATACACTCCCCGTGGTCTACGACAGAGGTCTTATCGGAATGTTTCATGACTGGTGT
GAGGCCTTTTCAACCTATCCTCGAACGTATGATCTCCTTCATGTTGACAATCTCTTCACT
GCTGAAAGTCATAGATGTGAAATGAAGTATGTTATGCTAGAAATGGATCGTATTTTGCGA
CCCAATGGATATGCAATTATCCGAGAATCCAGTTACTTCATAGATGTCCTTGCCCCTATG
GCTAAGGGCATGAGATGGAGCTGTCGCAAAGAAGACACAGAGTCTAGCGGACAGAACGAG
AAGATACTGATTTGCCAAAAGAAGCTTTGGTATTCAAAGGAGAGTTCATTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400053757
PEP Infomation

pacid=37469056 transcript=PGSC0003DMT400079286 locus=PGSC0003DMG401030861 ID=PGSC0003DMT400079286.v4.03 annot-version=v4.03
Sequence

MKHKDGKPYPPNKNSKKIQVTLIVVVLCGFSFYLGGIFCSEKETYATKEVNREDETPIGN
SAGSLQTRGNSFTECSADYQDYTPCTDPRRWKKYGLHRLTFMERHCPPNFERKECLVPPP
DGYKVPIRWPKSKNECWYRNVPYDWINKQKSNQHWLVKEGEKFIFPGGGTMFPNGVGKYV
DLMEDLIPQMKDGTVRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGI
PAVLGIISTQRLPFPSNSFDMAHCSRCLIPWTEFGGVYLLEVHRILRPGGFWVLSGPPVN
YENRWRGWNTTIEEQRSDYEKLQDLLTSMCFKLFNKKDDIAVWQKLTDNSCYKKLDNLDN
YPPKCDDGTEPDSAWYTPLRPCVVVPPATRKVKLNALAKWPERLHVAPERVSDIRGGSEG
AFKHDDSKWKVRAKHYKKLLPAIGTEKVRNVMDMNTLYGGFAAALVEDPLWVMNVVSSYA
ANTLPVVYDRGLIGMFHDWCEAFSTYPRTYDLLHVDNLFTAESHRCEMKYVMLEMDRILR
PNGYAIIRESSYFIDVLAPMAKGMRWSCRKEDTESSGQNEKILICQKKLWYSKESSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400079286
Transcript Infomation

pacid=37469056 locus=PGSC0003DMG401030861 ID=PGSC0003DMT400079286.v4.03 annot-version=v4.03
Sequence

ATGAAGCACAAAGATGGAAAACCATATCCACCAAATAAAAATTCAAAGAAAATTCAAGTG
ACACTAATAGTTGTGGTGCTCTGTGGGTTTTCATTCTATCTTGGAGGAATTTTTTGTTCT
GAAAAGGAGACATATGCAACTAAGGAGGTTAACAGGGAGGATGAAACTCCCATAGGGAAT
TCAGCTGGCTCTCTACAAACCAGAGGCAATTCCTTTACTGAATGCAGTGCTGACTATCAG
GACTATACCCCATGCACAGATCCGAGGAGATGGAAGAAGTACGGTCTTCATCGCCTTACT
TTCATGGAACGACATTGCCCTCCTAATTTTGAAAGGAAGGAATGCTTGGTTCCTCCACCA
GATGGCTATAAGGTGCCAATAAGATGGCCAAAGAGCAAAAATGAATGTTGGTACAGGAAT
GTTCCATATGATTGGATTAACAAACAAAAATCCAATCAACATTGGCTCGTAAAAGAAGGG
GAGAAGTTTATCTTTCCTGGTGGTGGTACTATGTTCCCAAATGGTGTTGGGAAATATGTT
GATCTGATGGAAGATTTGATTCCACAAATGAAAGATGGCACCGTCCGAACTGCCATTGAT
ACTGGTTGTGGGGTGGCAAGCTGGGGAGGCGATCTACTAGATCGTGGAATTCTGACAGTC
TCTCTTGCTCCAAGAGATAATCACGAAGCTCAAGTTCAGTTTGCTCTGGAACGTGGAATT
CCTGCAGTTCTGGGCATTATTTCGACACAGCGTCTTCCTTTCCCTTCAAACTCTTTTGAC
ATGGCTCATTGCTCAAGATGCCTAATTCCATGGACTGAATTTGGTGGAGTTTACCTTCTT
GAAGTACATCGTATACTGCGTCCTGGAGGTTTCTGGGTCCTTTCTGGCCCACCAGTGAAC
TATGAGAACCGTTGGAGAGGATGGAACACCACCATTGAGGAGCAGAGATCAGATTACGAG
AAGTTGCAAGATTTGCTAACTTCGATGTGCTTCAAATTATTTAACAAGAAGGATGACATT
GCCGTGTGGCAGAAGTTGACAGACAATAGCTGCTATAAGAAACTTGATAACCTTGATAAC
TACCCACCAAAATGTGATGATGGTACTGAACCTGATTCCGCGTGGTACACTCCTCTCCGA
CCTTGTGTAGTTGTGCCTCCAGCTACTAGGAAAGTTAAGTTGAATGCCCTAGCCAAATGG
CCAGAAAGGTTGCATGTCGCCCCAGAACGTGTTTCTGATATTCGTGGAGGTAGCGAGGGT
GCCTTCAAGCATGACGATAGTAAGTGGAAGGTGCGAGCAAAGCACTATAAGAAGTTGCTC
CCTGCTATTGGAACTGAAAAGGTCAGGAATGTGATGGACATGAACACCTTGTACGGAGGT
TTCGCTGCTGCTCTGGTTGAGGATCCACTTTGGGTCATGAATGTGGTCTCCTCTTATGCT
GCCAATACACTCCCCGTGGTCTACGACAGAGGTCTTATCGGAATGTTTCATGACTGGTGT
GAGGCCTTTTCAACCTATCCTCGAACGTATGATCTCCTTCATGTTGACAATCTCTTCACT
GCTGAAAGTCATAGATGTGAAATGAAGTATGTTATGCTAGAAATGGATCGTATTTTGCGA
CCCAATGGATATGCAATTATCCGAGAATCCAGTTACTTCATAGATGTCCTTGCCCCTATG
GCTAAGGGCATGAGATGGAGCTGTCGCAAAGAAGACACAGAGTCTAGCGGACAGAACGAG
AAGATACTGATTTGCCAAAAGAAGCTTTGGTATTCAAAGGAGAGTTCATTATAA