Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079285
CDS Infomation

pacid=37468270 polypeptide=PGSC0003DMP400053756 locus=PGSC0003DMG400030860 ID=PGSC0003DMT400079285.v4.03 annot-version=v4.03
Sequence

ATGCCGCCGATTAACTTGACGGAAGGAGCAATAGAGATGCTATCGATCGGAGAAGGGCAT
CCCGAGGAGTTTAAACCGGTGCTACAGATCACGGATGTTCGGTTGGTGAATACTCAGAAC
CAGACAAACAATAATGAACGATACCGGATTTTGATATCGGACGGAACGCATATTCAGCAA
GGGATGTTAGCTACGCAGAAGAACGATCTAATTCGGTCTCAACAGATTCGGAAAGGAACT
ATTATTCAGATGAAAGAGTTCGTTCGTAATGTCATCCAGAATCGAGTGATCATCATTATT
ATTGAATTAGATATTTTACTTGAGACGTGTGATCAAATTGGAGACCCAAAGCATTATGTC
AGAACTGATGGTAGTGTCCCTTCGGTGCCACGACCAGCTGCCCCGCTGCAGCCTTCCACC
AATCAATTAGGTGGTGTAAGTGTAAACCCCCAATCAATTGCTTCTCTTTCCGCTACTTCA
GGCTCAACTCCAAGACCAAATATGTCAGGAGGAATGCAATCTCCAGAGATGAACCGTAGC
AGTGTTTACAATACTGCCTCTGTTGGGAATACTGACTCTGGACGATATAGTTCAGGTGCA
CCTCTTTACCCCAGAGCAGAATCTGGTCCTGCAATTTCACGGGCTCCAATGAATTATGTG
CGTCCACCTCAGCCTTCTTATCAACAGCCTCCTCAGTCTTCTTATCAGCAGCCATCACCA
ATGTACTCCAACAGAGGACCTGTAGCCAAGAATGAAGCACCTCCAAGGATTATTCCAATT
GCTGCTCTCAATCCATATCAGGGTCGGTGGACTATCAAGGCCAGGGTAACTGCAAAGACG
GAACTCAGACACTACAACAATCAAAGGGGTGATGGAAAAGTATTCTCTTTTGATCTTCTT
GATTCCGATGGAGGAGAAATAAGGGTGACTTGTTTTAACTCTGTAGCTGACCAATTTTAT
GACCAGATTGAACCAGGTAGAGTGTATCAAATTTCAAAAGGAAGCTTGAAACCAGCTCAG
AAAAATTACAATCACCTTCCAAATGACCATGAAATTATGCTCGAGAGCACGTCTGTAGTT
CAACCTTGTTTTGAGGATGACAGGGCTATTCCTCAGCAGCAATTTCATTTTCGGCCAATC
AGTGACATTGAAGCCATGGAGAACAACAATGTGATAGATGTCATTGGTGTGGTGTCTTCA
ATAAGTCCATCTAGTTCAATAATGAGGAAAAATGGTACAGAAACTCAGAAGAGAGTCCTC
CAGCTGAAGGACATGTCTGGTAGAAGTGTTGAAGTAACTTTGTGGGGAAATTTCTGCAAT
GCAGAAGGTCAAACACTTCAGAGTCTCTGTGATTCTGGGGCTTTCCCTGTCTTGGCAGTT
AAAGCTGGTAGAGTAAATGATTTTAATGGCAAATCTATAGGTACTATATCTACAAGCAAG
TTGTTTATAGAACCAGATTTTCCTGAAGCTCTGAAAACGAAGGCATGGTTCGAAAGGGAG
GGAAAGAACATGCCATCTATGTCATTGTCACGAGAAGTGAGCAGTATTGGTCGGACAGAT
GTGCGGAAGACTATATCTCAAATCAAAGATGAGAAGTTAGGCACTTCTGAGAAACCAGAT
TGGATCACTGTAAGTGCCAGTGTTACATTTATAAAGGTTGACAATTTTTGCTATACTGCA
TGTCCCCTCATGATAGGAGATAGACAGTGCAACAAAAAAGTGACAAATAATGGGGATGGG
AAATGGCGGTGTGACAGGTGTGATCAGACTGTTGATGAATGTGAATATAGGTACATTCTT
CGGTTCCAGATTCAGGACCATACTGGCTTAACATGGGTTACTGCATTTCAAGAATGTGGT
GACCAGATAATGGGTGTATCTGCAAAAGAATTGTATTTCTTAAAATATGAGGAGCAGGAT
GATGATAGGTTTGCAGAAATCATGCGTAATGTGTTATTCAACCAGTTTATATTTAAATTG
AAAGTGAAAGAAGAGATGTATAGTGATGAGCAGCATGTTAAGTCAACAGTGGTCAAAGCT
GAGAAGCTGAACTTCCAACCAGAGACCAGGTTTCTGTTTGACCTGATAAACAAGATTAAT
GGGCAGGAATCCAGCACTTTACCTCCTAAGACAGATGATGCAACTCTGAATTCAGGGTTT
AATAATACTGGATTTGGGAATAAACGCAAAGAACCAATGAGCCCTGTTGCAAGTTATGGT
GTCAGCCATAGCGGTATCAGCAGAGATAGTGGACTGCAGGGAAATCGGCAAGGTCCATAT
GGGAATCAGCTTACAGGCTCACAGTTCGCTCCGCCTGGCTCTACTGCAGGCAGTATCAGC
AGAGAAAGTGGACTGCAGGGAAATCGGCAAGGTCCATATGGAAATCAGCCTACTGGAACA
CAAAATGCTCCAACTGGCTCTTCTACAGGCATGTATATGAGCTGTAATAGTTGTGGTGGA
ACAGGTCATAGTGCTTCAAACTGTCCAAGCATGATGAGTGGTCAGAGCCAGGCATATGGA
GGTGGTTTTGGCAATAGGGCAACTTCAGGGATGAGCAGTGGTGGTGGTGGTGGTGGTGGT
GGTGGTGAGTGTTATAAATGCCATCAGTATGGACATTGGGCAAGAGATTGCCCAGGCGTA
AGCAATGCACCTGCTGCCAATAACATGACATCAGGAAGATACGGGAATACTCCAAGGCAA
CACGTCGGTGGTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053756
PEP Infomation

pacid=37468270 transcript=PGSC0003DMT400079285 locus=PGSC0003DMG400030860 ID=PGSC0003DMT400079285.v4.03 annot-version=v4.03
Sequence

MPPINLTEGAIEMLSIGEGHPEEFKPVLQITDVRLVNTQNQTNNNERYRILISDGTHIQQ
GMLATQKNDLIRSQQIRKGTIIQMKEFVRNVIQNRVIIIIIELDILLETCDQIGDPKHYV
RTDGSVPSVPRPAAPLQPSTNQLGGVSVNPQSIASLSATSGSTPRPNMSGGMQSPEMNRS
SVYNTASVGNTDSGRYSSGAPLYPRAESGPAISRAPMNYVRPPQPSYQQPPQSSYQQPSP
MYSNRGPVAKNEAPPRIIPIAALNPYQGRWTIKARVTAKTELRHYNNQRGDGKVFSFDLL
DSDGGEIRVTCFNSVADQFYDQIEPGRVYQISKGSLKPAQKNYNHLPNDHEIMLESTSVV
QPCFEDDRAIPQQQFHFRPISDIEAMENNNVIDVIGVVSSISPSSSIMRKNGTETQKRVL
QLKDMSGRSVEVTLWGNFCNAEGQTLQSLCDSGAFPVLAVKAGRVNDFNGKSIGTISTSK
LFIEPDFPEALKTKAWFEREGKNMPSMSLSREVSSIGRTDVRKTISQIKDEKLGTSEKPD
WITVSASVTFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRCDRCDQTVDECEYRYIL
RFQIQDHTGLTWVTAFQECGDQIMGVSAKELYFLKYEEQDDDRFAEIMRNVLFNQFIFKL
KVKEEMYSDEQHVKSTVVKAEKLNFQPETRFLFDLINKINGQESSTLPPKTDDATLNSGF
NNTGFGNKRKEPMSPVASYGVSHSGISRDSGLQGNRQGPYGNQLTGSQFAPPGSTAGSIS
RESGLQGNRQGPYGNQPTGTQNAPTGSSTGMYMSCNSCGGTGHSASNCPSMMSGQSQAYG
GGFGNRATSGMSSGGGGGGGGGECYKCHQYGHWARDCPGVSNAPAANNMTSGRYGNTPRQ
HVGGF*

Transcript Sequence

Transcript ID

PGSC0003DMT400079285
Transcript Infomation

pacid=37468270 locus=PGSC0003DMG400030860 ID=PGSC0003DMT400079285.v4.03 annot-version=v4.03
Sequence

ATGCCGCCGATTAACTTGACGGAAGGAGCAATAGAGATGCTATCGATCGGAGAAGGGCAT
CCCGAGGAGTTTAAACCGGTGCTACAGATCACGGATGTTCGGTTGGTGAATACTCAGAAC
CAGACAAACAATAATGAACGATACCGGATTTTGATATCGGACGGAACGCATATTCAGCAA
GGGATGTTAGCTACGCAGAAGAACGATCTAATTCGGTCTCAACAGATTCGGAAAGGAACT
ATTATTCAGATGAAAGAGTTCGTTCGTAATGTCATCCAGAATCGAGTGATCATCATTATT
ATTGAATTAGATATTTTACTTGAGACGTGTGATCAAATTGGAGACCCAAAGCATTATGTC
AGAACTGATGGTAGTGTCCCTTCGGTGCCACGACCAGCTGCCCCGCTGCAGCCTTCCACC
AATCAATTAGGTGGTGTAAGTGTAAACCCCCAATCAATTGCTTCTCTTTCCGCTACTTCA
GGCTCAACTCCAAGACCAAATATGTCAGGAGGAATGCAATCTCCAGAGATGAACCGTAGC
AGTGTTTACAATACTGCCTCTGTTGGGAATACTGACTCTGGACGATATAGTTCAGGTGCA
CCTCTTTACCCCAGAGCAGAATCTGGTCCTGCAATTTCACGGGCTCCAATGAATTATGTG
CGTCCACCTCAGCCTTCTTATCAACAGCCTCCTCAGTCTTCTTATCAGCAGCCATCACCA
ATGTACTCCAACAGAGGACCTGTAGCCAAGAATGAAGCACCTCCAAGGATTATTCCAATT
GCTGCTCTCAATCCATATCAGGGTCGGTGGACTATCAAGGCCAGGGTAACTGCAAAGACG
GAACTCAGACACTACAACAATCAAAGGGGTGATGGAAAAGTATTCTCTTTTGATCTTCTT
GATTCCGATGGAGGAGAAATAAGGGTGACTTGTTTTAACTCTGTAGCTGACCAATTTTAT
GACCAGATTGAACCAGGTAGAGTGTATCAAATTTCAAAAGGAAGCTTGAAACCAGCTCAG
AAAAATTACAATCACCTTCCAAATGACCATGAAATTATGCTCGAGAGCACGTCTGTAGTT
CAACCTTGTTTTGAGGATGACAGGGCTATTCCTCAGCAGCAATTTCATTTTCGGCCAATC
AGTGACATTGAAGCCATGGAGAACAACAATGTGATAGATGTCATTGGTGTGGTGTCTTCA
ATAAGTCCATCTAGTTCAATAATGAGGAAAAATGGTACAGAAACTCAGAAGAGAGTCCTC
CAGCTGAAGGACATGTCTGGTAGAAGTGTTGAAGTAACTTTGTGGGGAAATTTCTGCAAT
GCAGAAGGTCAAACACTTCAGAGTCTCTGTGATTCTGGGGCTTTCCCTGTCTTGGCAGTT
AAAGCTGGTAGAGTAAATGATTTTAATGGCAAATCTATAGGTACTATATCTACAAGCAAG
TTGTTTATAGAACCAGATTTTCCTGAAGCTCTGAAAACGAAGGCATGGTTCGAAAGGGAG
GGAAAGAACATGCCATCTATGTCATTGTCACGAGAAGTGAGCAGTATTGGTCGGACAGAT
GTGCGGAAGACTATATCTCAAATCAAAGATGAGAAGTTAGGCACTTCTGAGAAACCAGAT
TGGATCACTGTAAGTGCCAGTGTTACATTTATAAAGGTTGACAATTTTTGCTATACTGCA
TGTCCCCTCATGATAGGAGATAGACAGTGCAACAAAAAAGTGACAAATAATGGGGATGGG
AAATGGCGGTGTGACAGGTGTGATCAGACTGTTGATGAATGTGAATATAGGTACATTCTT
CGGTTCCAGATTCAGGACCATACTGGCTTAACATGGGTTACTGCATTTCAAGAATGTGGT
GACCAGATAATGGGTGTATCTGCAAAAGAATTGTATTTCTTAAAATATGAGGAGCAGGAT
GATGATAGGTTTGCAGAAATCATGCGTAATGTGTTATTCAACCAGTTTATATTTAAATTG
AAAGTGAAAGAAGAGATGTATAGTGATGAGCAGCATGTTAAGTCAACAGTGGTCAAAGCT
GAGAAGCTGAACTTCCAACCAGAGACCAGGTTTCTGTTTGACCTGATAAACAAGATTAAT
GGGCAGGAATCCAGCACTTTACCTCCTAAGACAGATGATGCAACTCTGAATTCAGGGTTT
AATAATACTGGATTTGGGAATAAACGCAAAGAACCAATGAGCCCTGTTGCAAGTTATGGT
GTCAGCCATAGCGGTATCAGCAGAGATAGTGGACTGCAGGGAAATCGGCAAGGTCCATAT
GGGAATCAGCTTACAGGCTCACAGTTCGCTCCGCCTGGCTCTACTGCAGGCAGTATCAGC
AGAGAAAGTGGACTGCAGGGAAATCGGCAAGGTCCATATGGAAATCAGCCTACTGGAACA
CAAAATGCTCCAACTGGCTCTTCTACAGGCATGTATATGAGCTGTAATAGTTGTGGTGGA
ACAGGTCATAGTGCTTCAAACTGTCCAAGCATGATGAGTGGTCAGAGCCAGGCATATGGA
GGTGGTTTTGGCAATAGGGCAACTTCAGGGATGAGCAGTGGTGGTGGTGGTGGTGGTGGT
GGTGGTGAGTGTTATAAATGCCATCAGTATGGACATTGGGCAAGAGATTGCCCAGGCGTA
AGCAATGCACCTGCTGCCAATAACATGACATCAGGAAGATACGGGAATACTCCAAGGCAA
CACGTCGGTGGTTTTTGA