Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079272
CDS Infomation

pacid=37470362 polypeptide=PGSC0003DMP400053750 locus=PGSC0003DMG400030855 ID=PGSC0003DMT400079272.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGCTTTGCTTCAAGTTGTGCTAGACAATCTCACTTCTTTTCTCAAAGGGGAA
CTTGTATTGCTTTTTGGTTTACAAAATGAGTTTCAAAAGCTCTCAAGCATCTTCTCTACA
ATCCAATCAGTCCTTGAAGATGCTCAGGAGAAGCAATTCAACGACAAGCCACTTGAAAAT
TGGTTGCAAAAACTCAATGTTGCTACATATGAAGTCGATGACATCTTGGATGAATATAAA
ACTAAGGCCACACGATTCTCCCAGTCTGCATATGGCCGTTATCATCCAAAGGCAATCCCT
TTCTGTCACAAAGTCGGGAAAAGGATGGACCAAGTGATGAAAACACTGGATGCAATTGCT
GAGGAAAGAAGGAATTTTCATCTGCAAGAAAAGATTATAGAGAGACAAGCTGCTAGACGG
GAAACAGGCTCTATATTAACTGAACCACAAGTTTATGGAAGGGACAAAGAGGAAGATGAG
ATAGTGAAAATCCTGATAAACAATGTTAGTAATGCCCAACAACTTTCAGTCCTCCCAATA
CTTGGTATGGGGGGACTAGGAAAGACCACTCTTGCCCAAATGGTCTTCAATGATCAGAGA
GTTACTGAGCATATCCATCCCAAAATATGGGTTTGTGTCTCAGATAATTTTGACGAGAAG
AGGTTGATGAAAACAATTATAGGAAATATTGAAAGAAGTTCTCTTGATATCGAGGACTTG
GCTTCACTTCAGGAGAAGCTTCAAGAGTTGTTGAATGGAAAAAGATACTTTCTTGTCTTA
GATGATGTTTGGAATGAAGATCAACAGAAGTGGGATAATTTAAGAGCAGTCTTGAAGGTT
GGAGCAAGTGGTGCTTCTGTTCTAACCACTACTCGTCTTGAAAAGGTTGGATCAATTATG
GGAACATTGCAACCATATGAATTGTCAAATATGTCTCAAGAAGATTGTTGGTTGTTGTTC
ATCCAACGTGCATTTGGACACCAAGAAGAAATAAATCCTTACCTTGTGGCTATCGGAAAG
GAGATTGTGAAAAAATGTGGTGGTGTGCCTCTAGCAGCCAAGACTCTTGGAGGTATTTTG
CGCTTCAAGAGAGAGGAAAGAGAATGGGAACGTGTAAGAGATAGTGAGATTTGGAATTTG
CCTCAAGATGAAAGTTCTATTCTACCTGCCCTAAGGCTTAGTTATCATAATCTTCCACTT
GATTTGAGACAATGCTTTGTGTATTGTGCGGTGTTCCCAAAGGACACAGAAATGGAAAAG
GAAAATCTAATTGCTATCTGGATGGCACACGGTTTTCTTTTATCAAAAGGACACTTGGAG
CTAGAGGATGTGGGTAATGAAGTATGGAAAGAATTATATCTGAGGTCTTTTTTCCAAGAG
ATTGAAGTTAAATCTGGTAAAACTTATTTCAAGATGCATGATCTCATCCATGATTTGGCT
ACATCTCTGTTTTCGGCAAACACATCAAGCAGCAATATCCGCGAAATAAATGTAAAAAGT
TACACACATATGATGTCCATTGGTTTCGCTGAAGTGGTGTCTGTGTCTCCTTACTATCCA
CTCAGCTTGGAACAGTTTGTCTCGTTAAGAGTGCTTAATCTAAGTTACTCAAAACTTGAC
CAGTTACCATCTTCCATTGGAGATCTAGTGCATTTGAGATACCTAAACTTGTCTGGCAAT
GGTAGAATTAGTAGTCTTCCAAAGCAGTTATGCAAGCTTCAAAATCTGCAGACTCTTGAT
CTACAATATTGCACCTCACTTTGTTATTTGCCTAAAAAAACAAGTAAACTTGGTAGTCTC
CAAAATCTTTTACTTGATAAGTGTTATGCTTTGATTTCTATGCCACCATGGATAGGATCT
TTAACACGCCTTAGGATTCTAGATTGCTTTGTCATTGGCAAGAGAAAAAGTTGTCAACCT
GGTGAACTACGAAATCTGAATCTCTATGGCTCAGTTGTTATCACACATCTTGAGAGAGTG
AAGAATAATAGGGACGCAAAAGAAGCCAATTTATCTGCAAAAGCGAATTTGCAATCTTTA
AGCATGTGTTGGGATAACAATGGACCACACAGATATGAATCAGAAGAAGTTAAAGTGCTT
GAAGCCCTTAAACCACACCCCAATCTGAAATATTTATATCTCACTGGCTTCAGAGGATTC
CGTCTCGCAGACTGGATGAATCACTCAGTTTTAAAAAATGTTGTCTCTATTGTAATTGAA
GGTTGCGAAAACTGCTCATGCTTACCACCCTTTGGTGAGCTGCCTTGTCTAGAAAGTCTA
GTGTTACACAAGGGGTCTGCGGAGGTGGAGTATGTTGAAGAAGACAATATTGATGTTCAT
TCTGGATCCCCCACAAGAATAAGATTTCCATCTCTGAGAAAACTTACTGTAGCCAAATTC
CGTAATCTGAAAGGATTGCTGAAAAAAGAAGGAGAAGAGCAATTCCCTGTGCTTGAAGAG
GTGGAGATTGAGCAGTGCCCTGTGTTTGTTATCCCTACCCTTTCTTCTGTCAAGAAATTG
GAAATCGCGCGAGAGGCAGATGCAACTGGTTTCAGGTCCATATCTAATCTTAGGGATCTT
ACTTCCCTCTACATTAGCGATAACGAAGAAGCTACTTCACTCCCAGAAGAGATGTTCAAA
AACCTTGCAAATCTCAAAGACTTGACTATCTCTGAGTTCAAAAATCTCAAAAAGCTGCCT
ACCAGCTTGGCTACTCTCAATGCTTTGAAGAGTCTGAAAATTGAATGTTGTGGTGCACTA
GAGAGTCTCCCCGAGGAAGGGCTGGAAGGTTTAACTTCCCTCACAGAGTTATCTCTCCAG
TACTGTGAGATGCTAAAATGTTTACCCGAGGGATTGCAGTACCTAACAGCCCTCACAAGT
TTAACAGTTGAGGGATGTCCAGAAGTGGAAAAGAGGTGTGAGAAGGGAATAGGAGAAGAC
TGGCACAAAATTGCTCACATTCCTAATCTGCATATTCGTAACTATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053750
PEP Infomation

pacid=37470362 transcript=PGSC0003DMT400079272 locus=PGSC0003DMG400030855 ID=PGSC0003DMT400079272.v4.03 annot-version=v4.03
Sequence

MAEALLQVVLDNLTSFLKGELVLLFGLQNEFQKLSSIFSTIQSVLEDAQEKQFNDKPLEN
WLQKLNVATYEVDDILDEYKTKATRFSQSAYGRYHPKAIPFCHKVGKRMDQVMKTLDAIA
EERRNFHLQEKIIERQAARRETGSILTEPQVYGRDKEEDEIVKILINNVSNAQQLSVLPI
LGMGGLGKTTLAQMVFNDQRVTEHIHPKIWVCVSDNFDEKRLMKTIIGNIERSSLDIEDL
ASLQEKLQELLNGKRYFLVLDDVWNEDQQKWDNLRAVLKVGASGASVLTTTRLEKVGSIM
GTLQPYELSNMSQEDCWLLFIQRAFGHQEEINPYLVAIGKEIVKKCGGVPLAAKTLGGIL
RFKREEREWERVRDSEIWNLPQDESSILPALRLSYHNLPLDLRQCFVYCAVFPKDTEMEK
ENLIAIWMAHGFLLSKGHLELEDVGNEVWKELYLRSFFQEIEVKSGKTYFKMHDLIHDLA
TSLFSANTSSSNIREINVKSYTHMMSIGFAEVVSVSPYYPLSLEQFVSLRVLNLSYSKLD
QLPSSIGDLVHLRYLNLSGNGRISSLPKQLCKLQNLQTLDLQYCTSLCYLPKKTSKLGSL
QNLLLDKCYALISMPPWIGSLTRLRILDCFVIGKRKSCQPGELRNLNLYGSVVITHLERV
KNNRDAKEANLSAKANLQSLSMCWDNNGPHRYESEEVKVLEALKPHPNLKYLYLTGFRGF
RLADWMNHSVLKNVVSIVIEGCENCSCLPPFGELPCLESLVLHKGSAEVEYVEEDNIDVH
SGSPTRIRFPSLRKLTVAKFRNLKGLLKKEGEEQFPVLEEVEIEQCPVFVIPTLSSVKKL
EIAREADATGFRSISNLRDLTSLYISDNEEATSLPEEMFKNLANLKDLTISEFKNLKKLP
TSLATLNALKSLKIECCGALESLPEEGLEGLTSLTELSLQYCEMLKCLPEGLQYLTALTS
LTVEGCPEVEKRCEKGIGEDWHKIAHIPNLHIRNY*

Transcript Sequence

Transcript ID

PGSC0003DMT400079272
Transcript Infomation

pacid=37470362 locus=PGSC0003DMG400030855 ID=PGSC0003DMT400079272.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAGCTTTGCTTCAAGTTGTGCTAGACAATCTCACTTCTTTTCTCAAAGGGGAA
CTTGTATTGCTTTTTGGTTTACAAAATGAGTTTCAAAAGCTCTCAAGCATCTTCTCTACA
ATCCAATCAGTCCTTGAAGATGCTCAGGAGAAGCAATTCAACGACAAGCCACTTGAAAAT
TGGTTGCAAAAACTCAATGTTGCTACATATGAAGTCGATGACATCTTGGATGAATATAAA
ACTAAGGCCACACGATTCTCCCAGTCTGCATATGGCCGTTATCATCCAAAGGCAATCCCT
TTCTGTCACAAAGTCGGGAAAAGGATGGACCAAGTGATGAAAACACTGGATGCAATTGCT
GAGGAAAGAAGGAATTTTCATCTGCAAGAAAAGATTATAGAGAGACAAGCTGCTAGACGG
GAAACAGGCTCTATATTAACTGAACCACAAGTTTATGGAAGGGACAAAGAGGAAGATGAG
ATAGTGAAAATCCTGATAAACAATGTTAGTAATGCCCAACAACTTTCAGTCCTCCCAATA
CTTGGTATGGGGGGACTAGGAAAGACCACTCTTGCCCAAATGGTCTTCAATGATCAGAGA
GTTACTGAGCATATCCATCCCAAAATATGGGTTTGTGTCTCAGATAATTTTGACGAGAAG
AGGTTGATGAAAACAATTATAGGAAATATTGAAAGAAGTTCTCTTGATATCGAGGACTTG
GCTTCACTTCAGGAGAAGCTTCAAGAGTTGTTGAATGGAAAAAGATACTTTCTTGTCTTA
GATGATGTTTGGAATGAAGATCAACAGAAGTGGGATAATTTAAGAGCAGTCTTGAAGGTT
GGAGCAAGTGGTGCTTCTGTTCTAACCACTACTCGTCTTGAAAAGGTTGGATCAATTATG
GGAACATTGCAACCATATGAATTGTCAAATATGTCTCAAGAAGATTGTTGGTTGTTGTTC
ATCCAACGTGCATTTGGACACCAAGAAGAAATAAATCCTTACCTTGTGGCTATCGGAAAG
GAGATTGTGAAAAAATGTGGTGGTGTGCCTCTAGCAGCCAAGACTCTTGGAGGTATTTTG
CGCTTCAAGAGAGAGGAAAGAGAATGGGAACGTGTAAGAGATAGTGAGATTTGGAATTTG
CCTCAAGATGAAAGTTCTATTCTACCTGCCCTAAGGCTTAGTTATCATAATCTTCCACTT
GATTTGAGACAATGCTTTGTGTATTGTGCGGTGTTCCCAAAGGACACAGAAATGGAAAAG
GAAAATCTAATTGCTATCTGGATGGCACACGGTTTTCTTTTATCAAAAGGACACTTGGAG
CTAGAGGATGTGGGTAATGAAGTATGGAAAGAATTATATCTGAGGTCTTTTTTCCAAGAG
ATTGAAGTTAAATCTGGTAAAACTTATTTCAAGATGCATGATCTCATCCATGATTTGGCT
ACATCTCTGTTTTCGGCAAACACATCAAGCAGCAATATCCGCGAAATAAATGTAAAAAGT
TACACACATATGATGTCCATTGGTTTCGCTGAAGTGGTGTCTGTGTCTCCTTACTATCCA
CTCAGCTTGGAACAGTTTGTCTCGTTAAGAGTGCTTAATCTAAGTTACTCAAAACTTGAC
CAGTTACCATCTTCCATTGGAGATCTAGTGCATTTGAGATACCTAAACTTGTCTGGCAAT
GGTAGAATTAGTAGTCTTCCAAAGCAGTTATGCAAGCTTCAAAATCTGCAGACTCTTGAT
CTACAATATTGCACCTCACTTTGTTATTTGCCTAAAAAAACAAGTAAACTTGGTAGTCTC
CAAAATCTTTTACTTGATAAGTGTTATGCTTTGATTTCTATGCCACCATGGATAGGATCT
TTAACACGCCTTAGGATTCTAGATTGCTTTGTCATTGGCAAGAGAAAAAGTTGTCAACCT
GGTGAACTACGAAATCTGAATCTCTATGGCTCAGTTGTTATCACACATCTTGAGAGAGTG
AAGAATAATAGGGACGCAAAAGAAGCCAATTTATCTGCAAAAGCGAATTTGCAATCTTTA
AGCATGTGTTGGGATAACAATGGACCACACAGATATGAATCAGAAGAAGTTAAAGTGCTT
GAAGCCCTTAAACCACACCCCAATCTGAAATATTTATATCTCACTGGCTTCAGAGGATTC
CGTCTCGCAGACTGGATGAATCACTCAGTTTTAAAAAATGTTGTCTCTATTGTAATTGAA
GGTTGCGAAAACTGCTCATGCTTACCACCCTTTGGTGAGCTGCCTTGTCTAGAAAGTCTA
GTGTTACACAAGGGGTCTGCGGAGGTGGAGTATGTTGAAGAAGACAATATTGATGTTCAT
TCTGGATCCCCCACAAGAATAAGATTTCCATCTCTGAGAAAACTTACTGTAGCCAAATTC
CGTAATCTGAAAGGATTGCTGAAAAAAGAAGGAGAAGAGCAATTCCCTGTGCTTGAAGAG
GTGGAGATTGAGCAGTGCCCTGTGTTTGTTATCCCTACCCTTTCTTCTGTCAAGAAATTG
GAAATCGCGCGAGAGGCAGATGCAACTGGTTTCAGGTCCATATCTAATCTTAGGGATCTT
ACTTCCCTCTACATTAGCGATAACGAAGAAGCTACTTCACTCCCAGAAGAGATGTTCAAA
AACCTTGCAAATCTCAAAGACTTGACTATCTCTGAGTTCAAAAATCTCAAAAAGCTGCCT
ACCAGCTTGGCTACTCTCAATGCTTTGAAGAGTCTGAAAATTGAATGTTGTGGTGCACTA
GAGAGTCTCCCCGAGGAAGGGCTGGAAGGTTTAACTTCCCTCACAGAGTTATCTCTCCAG
TACTGTGAGATGCTAAAATGTTTACCCGAGGGATTGCAGTACCTAACAGCCCTCACAAGT
TTAACAGTTGAGGGATGTCCAGAAGTGGAAAAGAGGTGTGAGAAGGGAATAGGAGAAGAC
TGGCACAAAATTGCTCACATTCCTAATCTGCATATTCGTAACTATTAG