Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079230
CDS Infomation

pacid=37475519 polypeptide=PGSC0003DMP400053718 locus=PGSC0003DMG400030837 ID=PGSC0003DMT400079230.v4.03 annot-version=v4.03
Sequence

ATGAAGAGGTTCAGTTTCTCAGATTCTTCTGGCAAATTGCTTTATCCAACTGAAGAGAAA
AATACAGAGAATTTGGGATATAGCAATGAATTTCAGGCAATGTTGGATGGATTGGAAGAT
GAAGATGGGATAGAAGAAAGTGGATGTGGAACAGGGAAGAAAAGGAGGTTAAGAGTGGAT
CAAGTTCAAGCACTGGAGAAAATTTTCGAAGTTGATAACAAACTTGATCCAGATAGAAAA
GTAAAAATTGCACAAGAAATAGGCCTGCAACCAAGACAAATTGCAATTTGGTTCCAAAAT
CGCCGCGCCCGTTGGAAGACTAAGCAATTAGAAAGAGATTATAACATTCTCAAGTCCAAT
TATGAAGCTCTTCAACATAATTACACCAAAGTTGAACATGAAAAAGAAGGCTTGATTACT
GAGTTAAAAGGACTGAAAGAGAAGCTAGGAGAGGAAACATTATTATCCCCTGTATTTCAA
AGGCCACAAGAAATTCTGAATAAGTTGAAGAATTCATCAGATTTTGTGGATTCAAAAGAT
GGATCATCAGATAGTGATTCAAGTGGAGTGATGAATGAAGAAAATTACAACATTTCAACA
CTCAAATATCAACAATTAATGCCTAAAGTGTCATCTTACAATAATGCCTTGGATCATTTG
TCATTATCTTCATCAACATACACACAGTTAATGGATCCAAGGGCAAGTAATTCTACATCA
TCAATGAGAGCTTTTAATAATAGTAATAATCAGCAGCAGCAACAAGGTGTTGGGAGAATT
GAGGAGCAAAATGGTTTTACAACAGAGGATTCTTGTAACATTTACTCTGTTGATCAAGCA
CCAAATCTTTATTGGTACTTTAGTGACCATAGAAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053718
PEP Infomation

pacid=37475519 transcript=PGSC0003DMT400079230 locus=PGSC0003DMG400030837 ID=PGSC0003DMT400079230.v4.03 annot-version=v4.03
Sequence

MKRFSFSDSSGKLLYPTEEKNTENLGYSNEFQAMLDGLEDEDGIEESGCGTGKKRRLRVD
QVQALEKIFEVDNKLDPDRKVKIAQEIGLQPRQIAIWFQNRRARWKTKQLERDYNILKSN
YEALQHNYTKVEHEKEGLITELKGLKEKLGEETLLSPVFQRPQEILNKLKNSSDFVDSKD
GSSDSDSSGVMNEENYNISTLKYQQLMPKVSSYNNALDHLSLSSSTYTQLMDPRASNSTS
SMRAFNNSNNQQQQQGVGRIEEQNGFTTEDSCNIYSVDQAPNLYWYFSDHRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400079230
Transcript Infomation

pacid=37475519 locus=PGSC0003DMG400030837 ID=PGSC0003DMT400079230.v4.03 annot-version=v4.03
Sequence

ATGAAGAGGTTCAGTTTCTCAGATTCTTCTGGCAAATTGCTTTATCCAACTGAAGAGAAA
AATACAGAGAATTTGGGATATAGCAATGAATTTCAGGCAATGTTGGATGGATTGGAAGAT
GAAGATGGGATAGAAGAAAGTGGATGTGGAACAGGGAAGAAAAGGAGGTTAAGAGTGGAT
CAAGTTCAAGCACTGGAGAAAATTTTCGAAGTTGATAACAAACTTGATCCAGATAGAAAA
GTAAAAATTGCACAAGAAATAGGCCTGCAACCAAGACAAATTGCAATTTGGTTCCAAAAT
CGCCGCGCCCGTTGGAAGACTAAGCAATTAGAAAGAGATTATAACATTCTCAAGTCCAAT
TATGAAGCTCTTCAACATAATTACACCAAAGTTGAACATGAAAAAGAAGGCTTGATTACT
GAGTTAAAAGGACTGAAAGAGAAGCTAGGAGAGGAAACATTATTATCCCCTGTATTTCAA
AGGCCACAAGAAATTCTGAATAAGTTGAAGAATTCATCAGATTTTGTGGATTCAAAAGAT
GGATCATCAGATAGTGATTCAAGTGGAGTGATGAATGAAGAAAATTACAACATTTCAACA
CTCAAATATCAACAATTAATGCCTAAAGTGTCATCTTACAATAATGCCTTGGATCATTTG
TCATTATCTTCATCAACATACACACAGTTAATGGATCCAAGGGCAAGTAATTCTACATCA
TCAATGAGAGCTTTTAATAATAGTAATAATCAGCAGCAGCAACAAGGTGTTGGGAGAATT
GAGGAGCAAAATGGTTTTACAACAGAGGATTCTTGTAACATTTACTCTGTTGATCAAGCA
CCAAATCTTTATTGGTACTTTAGTGACCATAGAAATTAG