Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079224
CDS Infomation

pacid=37473064 polypeptide=PGSC0003DMP400053713 locus=PGSC0003DMG400030835 ID=PGSC0003DMT400079224.v4.03 annot-version=v4.03
Sequence

ATGCAGAAGAAAAGATGGAGAAAAGTGTCTATTGTGCGCAAGATGTTAACTTTTGCAATC
GCTGCAATAGCCCTTATGGCTCTTCTATATGTTCATGTCGAATTTCCTGCTTCAGAAGTT
ACCAAGTTGCCTGATAAACTTCCCACGCAACATGAATTTTCATCCCAAAAGCTGAGTAGA
GAAAGAAGCTGGATTCAAGAACTTGCCCCACCCCATTTGCCAAAGGCTCCTCTCGCTGCT
CGCAAGTTAGATGTTGCAAGTCGAAATGGAAGTTTGGAAAAGTTATGGAAACCTCCCCCA
AATCGCGACCATGTTCCTTGTGTTGCTGCAAGTCCATTATATACACCTCCTCCAGAGTCT
CGAGGCTACCTGCTGGTTCATGCCAATGGTGGGCTCAATCAGATGAGAGCTGGGATATGT
GACATGGTTGCTGTTGCTCGTATCATAAATGCTACTCTTGTGATCCCTGAGCTTGATAAG
CGCTCACTTTGGCAGGACTCTAGCAACTTCTCCGATGTCTTTGATGAAGACCATTTTATT
AATTCTTTGAAAAACGATGTAAATGTCATCAAAAAGCTACCGAAGGAACTGGCATCTGCA
ACTAAAGCAGTTAAACATTTTAGGAGTTGGTCTGGTGTGGATTACTATGAGGAAGAGATT
GCACGACTGTGGGATGAATACCAGATTATTCGAGCTGCCAAGTCTGATTCAAGATTGGCG
AATAATAACCTGCCTCCTGATATTCAGAAGCTGCGCTGTCGAGCTTGTTATGAAGCCCTT
CGATTTGCTCCCAAGATTGAAGCAATGGGAAAGATGTTGGTTGATCGGATGAGATCATAT
GGCCCCTATATTGCTTTACATTTGCGATTTGAAAAGGACATGCTTGCTTTTAGTGGATGC
ACACATGATCTATCCCCAGAAGAAGCTGAGGAACTGAAGGCAATTAGGGAAAACACCACA
TGGTGGAAGGTGAAAGAAATTGACCCTGTAGAACAGAGAAGTAAAGGCTATTGTCCATTA
ACTCCAAGAGAAGTTGGACTATTCCTTTCCGCTCTTGGATTTCCATCAAACACTCCTATA
TATATTGCTGCTGGAGAGATATATGGGGGTGATTCCCATATGTCTGATCTGTTGTTGCGC
TACCCCTTATTAATGAATAAGGAAAAGTTGGCTTCTATTGAGGAGCTTGAGCCATTTGTC
AATCATGCATCTCAATTGGCTGCCCTAGACTATATCGTGTCTATTGAGAGTGACATATTC
ATTCCTACGTACTCGGGAAATATGGCAAGAGCAGTTGAGGGACATCGTCGATTTCTGGGG
CATAGGAAAACAATATCTCCTGATAGGAGAACTCTTGTCCGGCTTTTTGACAAAATTGAC
CAGGGTACGATGAAAGAGGGGAAAAATCTGTCCAATCGCATTATTGAAATCCACAGGAGG
CGGCAAGGATCGCCAAGAAAGAGGAAAGGGCCAATTTCAGGTACAAAGGGAACAGATAGG
TTTCGTTCAGAGGAGGCATTCTATGTAAATCCTCTACCAGACTGTTTATGTCGAAAGGAA
TCGTCATACATGAATAATTCTCAAAGTATCAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053713
PEP Infomation

pacid=37473064 transcript=PGSC0003DMT400079224 locus=PGSC0003DMG400030835 ID=PGSC0003DMT400079224.v4.03 annot-version=v4.03
Sequence

MQKKRWRKVSIVRKMLTFAIAAIALMALLYVHVEFPASEVTKLPDKLPTQHEFSSQKLSR
ERSWIQELAPPHLPKAPLAARKLDVASRNGSLEKLWKPPPNRDHVPCVAASPLYTPPPES
RGYLLVHANGGLNQMRAGICDMVAVARIINATLVIPELDKRSLWQDSSNFSDVFDEDHFI
NSLKNDVNVIKKLPKELASATKAVKHFRSWSGVDYYEEEIARLWDEYQIIRAAKSDSRLA
NNNLPPDIQKLRCRACYEALRFAPKIEAMGKMLVDRMRSYGPYIALHLRFEKDMLAFSGC
THDLSPEEAEELKAIRENTTWWKVKEIDPVEQRSKGYCPLTPREVGLFLSALGFPSNTPI
YIAAGEIYGGDSHMSDLLLRYPLLMNKEKLASIEELEPFVNHASQLAALDYIVSIESDIF
IPTYSGNMARAVEGHRRFLGHRKTISPDRRTLVRLFDKIDQGTMKEGKNLSNRIIEIHRR
RQGSPRKRKGPISGTKGTDRFRSEEAFYVNPLPDCLCRKESSYMNNSQSIR*

Transcript Sequence

Transcript ID

PGSC0003DMT400079224
Transcript Infomation

pacid=37473064 locus=PGSC0003DMG400030835 ID=PGSC0003DMT400079224.v4.03 annot-version=v4.03
Sequence

ATGCAGAAGAAAAGATGGAGAAAAGTGTCTATTGTGCGCAAGATGTTAACTTTTGCAATC
GCTGCAATAGCCCTTATGGCTCTTCTATATGTTCATGTCGAATTTCCTGCTTCAGAAGTT
ACCAAGTTGCCTGATAAACTTCCCACGCAACATGAATTTTCATCCCAAAAGCTGAGTAGA
GAAAGAAGCTGGATTCAAGAACTTGCCCCACCCCATTTGCCAAAGGCTCCTCTCGCTGCT
CGCAAGTTAGATGTTGCAAGTCGAAATGGAAGTTTGGAAAAGTTATGGAAACCTCCCCCA
AATCGCGACCATGTTCCTTGTGTTGCTGCAAGTCCATTATATACACCTCCTCCAGAGTCT
CGAGGCTACCTGCTGGTTCATGCCAATGGTGGGCTCAATCAGATGAGAGCTGGGATATGT
GACATGGTTGCTGTTGCTCGTATCATAAATGCTACTCTTGTGATCCCTGAGCTTGATAAG
CGCTCACTTTGGCAGGACTCTAGCAACTTCTCCGATGTCTTTGATGAAGACCATTTTATT
AATTCTTTGAAAAACGATGTAAATGTCATCAAAAAGCTACCGAAGGAACTGGCATCTGCA
ACTAAAGCAGTTAAACATTTTAGGAGTTGGTCTGGTGTGGATTACTATGAGGAAGAGATT
GCACGACTGTGGGATGAATACCAGATTATTCGAGCTGCCAAGTCTGATTCAAGATTGGCG
AATAATAACCTGCCTCCTGATATTCAGAAGCTGCGCTGTCGAGCTTGTTATGAAGCCCTT
CGATTTGCTCCCAAGATTGAAGCAATGGGAAAGATGTTGGTTGATCGGATGAGATCATAT
GGCCCCTATATTGCTTTACATTTGCGATTTGAAAAGGACATGCTTGCTTTTAGTGGATGC
ACACATGATCTATCCCCAGAAGAAGCTGAGGAACTGAAGGCAATTAGGGAAAACACCACA
TGGTGGAAGGTGAAAGAAATTGACCCTGTAGAACAGAGAAGTAAAGGCTATTGTCCATTA
ACTCCAAGAGAAGTTGGACTATTCCTTTCCGCTCTTGGATTTCCATCAAACACTCCTATA
TATATTGCTGCTGGAGAGATATATGGGGGTGATTCCCATATGTCTGATCTGTTGTTGCGC
TACCCCTTATTAATGAATAAGGAAAAGTTGGCTTCTATTGAGGAGCTTGAGCCATTTGTC
AATCATGCATCTCAATTGGCTGCCCTAGACTATATCGTGTCTATTGAGAGTGACATATTC
ATTCCTACGTACTCGGGAAATATGGCAAGAGCAGTTGAGGGACATCGTCGATTTCTGGGG
CATAGGAAAACAATATCTCCTGATAGGAGAACTCTTGTCCGGCTTTTTGACAAAATTGAC
CAGGGTACGATGAAAGAGGGGAAAAATCTGTCCAATCGCATTATTGAAATCCACAGGAGG
CGGCAAGGATCGCCAAGAAAGAGGAAAGGGCCAATTTCAGGTACAAAGGGAACAGATAGG
TTTCGTTCAGAGGAGGCATTCTATGTAAATCCTCTACCAGACTGTTTATGTCGAAAGGAA
TCGTCATACATGAATAATTCTCAAAGTATCAGGTAG