Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079201
CDS Infomation

pacid=37474095 polypeptide=PGSC0003DMP400053692 locus=PGSC0003DMG400030823 ID=PGSC0003DMT400079201.v4.03 annot-version=v4.03
Sequence

ATGGATTCCATTAGAAGCATGCATGAACTTGACAAGCCTCATGCAGTTTGCATCCCATAC
CCAGCCCAAGGTCACATTAATCCAATGTTAAAATTAGCCAAAATCTTCAATCACAAAGGC
TTTCACATCACTTTTGTCAACACTGAATACAATCATAGGCGTCTACTTAAGTCTCGGGGC
CCTGATTCCCTCAAAGGCTTGCCATCTTTTCGATTTGAGACCATTCCTGATGGCCTTCCA
CCATCTGATGCCGATTCAACTCAAGATATTGTTTCTCTTGGTAAATCCACTACCAATACT
TGTTTAGGTCCTTTCAAGGAATTGCTTGCAAAGCTCAATAATACTTGTTCATCCAATGTG
CCACCTGTCTCGTGCATCGTTTCTGATGGATGTATGAGCTTCACTCTAGCTGCTGCTCAA
GAATTGGGCATCCCTGAAATTTTCTTTTGGACTCCAAGTGCTTGTGGTTTATTAGGTTAC
ATGCATTACCGCGACCTTGCTGAAAAAGGATACTTTCCACTTAAAGATGCAAGTGACTTA
ACAAATGGGTATTTGGAGACGGCTTTGGATTGGATACCGGGCATGAAAGGCATACGTCTG
AGGGATTTACCAACTTTATTGAGAAGTACAAATCCAGATGATTTTTTGTTCAACTACCTC
ATCCAAGAAACAGATAGAAGCAAATTAGCTTCTGCTATTGTTATCAATACATTTGATCCA
TTAGAGAAGGAAGTTCTTGAAACACTTCAGGTCCTTCTACCTCCGGTCTACACAATTGGA
CCCTTGCATTTTCTTTTAAAACATATTGAGGACAGGAATTTGGAGTGCTTGGGATCCAAT
CTTTGGAAAGAGGAACCAAAAACCGTAGAATGGCTTGATTCCAAGAAACCAAATTCTGTT
GTTTATGTTAATTTTGGGAGCATCACTGTCATGACCGCGAACCAACTTACTGAATTCGCA
TGGGGACTTGCCAATAGTCAGATGGATTTTTTGTGGATCATAAGGCCTGATACTGTATCA
GGGGAAAAAGCAACTCTGCCATCCGAATTCATGGAAGAAACAAAAGAAAGAGGGATGTTA
ACAAGTTGGTGCGCACAAGAACAAGTCCTTAGCCACCCTGCTATTGGAGGGTTCTTGACT
CACAGTGGATGGAATTCGACCCTTGAAAGTATCAGCAATGGGGTGCCAATGATCTGCTGG
CCATTTTTCACGGAACAACAGACTAACTGTTGGTTCAAATGCACCCAATGGAGAATTGGA
ATGGAAATTGACAATAATGTGAAAAGGGATGAAGTTGAACGTCTTGTGAGGGATCTAATG
GTCGGCGAGAAAGGTAAAGATATGAAGAAAAAGGCAATGGAGTGGAAGAAATTGGCTGAA
GAAGCTGCTGCAAAATCAACAGGATCATCTTATGTGAACATAGACAAGTTGATCAATGAA
ATTCTACTCAAACATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053692
PEP Infomation

pacid=37474095 transcript=PGSC0003DMT400079201 locus=PGSC0003DMG400030823 ID=PGSC0003DMT400079201.v4.03 annot-version=v4.03
Sequence

MDSIRSMHELDKPHAVCIPYPAQGHINPMLKLAKIFNHKGFHITFVNTEYNHRRLLKSRG
PDSLKGLPSFRFETIPDGLPPSDADSTQDIVSLGKSTTNTCLGPFKELLAKLNNTCSSNV
PPVSCIVSDGCMSFTLAAAQELGIPEIFFWTPSACGLLGYMHYRDLAEKGYFPLKDASDL
TNGYLETALDWIPGMKGIRLRDLPTLLRSTNPDDFLFNYLIQETDRSKLASAIVINTFDP
LEKEVLETLQVLLPPVYTIGPLHFLLKHIEDRNLECLGSNLWKEEPKTVEWLDSKKPNSV
VYVNFGSITVMTANQLTEFAWGLANSQMDFLWIIRPDTVSGEKATLPSEFMEETKERGML
TSWCAQEQVLSHPAIGGFLTHSGWNSTLESISNGVPMICWPFFTEQQTNCWFKCTQWRIG
MEIDNNVKRDEVERLVRDLMVGEKGKDMKKKAMEWKKLAEEAAAKSTGSSYVNIDKLINE
ILLKH*

Transcript Sequence

Transcript ID

PGSC0003DMT400079201
Transcript Infomation

pacid=37474095 locus=PGSC0003DMG400030823 ID=PGSC0003DMT400079201.v4.03 annot-version=v4.03
Sequence

ATGGATTCCATTAGAAGCATGCATGAACTTGACAAGCCTCATGCAGTTTGCATCCCATAC
CCAGCCCAAGGTCACATTAATCCAATGTTAAAATTAGCCAAAATCTTCAATCACAAAGGC
TTTCACATCACTTTTGTCAACACTGAATACAATCATAGGCGTCTACTTAAGTCTCGGGGC
CCTGATTCCCTCAAAGGCTTGCCATCTTTTCGATTTGAGACCATTCCTGATGGCCTTCCA
CCATCTGATGCCGATTCAACTCAAGATATTGTTTCTCTTGGTAAATCCACTACCAATACT
TGTTTAGGTCCTTTCAAGGAATTGCTTGCAAAGCTCAATAATACTTGTTCATCCAATGTG
CCACCTGTCTCGTGCATCGTTTCTGATGGATGTATGAGCTTCACTCTAGCTGCTGCTCAA
GAATTGGGCATCCCTGAAATTTTCTTTTGGACTCCAAGTGCTTGTGGTTTATTAGGTTAC
ATGCATTACCGCGACCTTGCTGAAAAAGGATACTTTCCACTTAAAGATGCAAGTGACTTA
ACAAATGGGTATTTGGAGACGGCTTTGGATTGGATACCGGGCATGAAAGGCATACGTCTG
AGGGATTTACCAACTTTATTGAGAAGTACAAATCCAGATGATTTTTTGTTCAACTACCTC
ATCCAAGAAACAGATAGAAGCAAATTAGCTTCTGCTATTGTTATCAATACATTTGATCCA
TTAGAGAAGGAAGTTCTTGAAACACTTCAGGTCCTTCTACCTCCGGTCTACACAATTGGA
CCCTTGCATTTTCTTTTAAAACATATTGAGGACAGGAATTTGGAGTGCTTGGGATCCAAT
CTTTGGAAAGAGGAACCAAAAACCGTAGAATGGCTTGATTCCAAGAAACCAAATTCTGTT
GTTTATGTTAATTTTGGGAGCATCACTGTCATGACCGCGAACCAACTTACTGAATTCGCA
TGGGGACTTGCCAATAGTCAGATGGATTTTTTGTGGATCATAAGGCCTGATACTGTATCA
GGGGAAAAAGCAACTCTGCCATCCGAATTCATGGAAGAAACAAAAGAAAGAGGGATGTTA
ACAAGTTGGTGCGCACAAGAACAAGTCCTTAGCCACCCTGCTATTGGAGGGTTCTTGACT
CACAGTGGATGGAATTCGACCCTTGAAAGTATCAGCAATGGGGTGCCAATGATCTGCTGG
CCATTTTTCACGGAACAACAGACTAACTGTTGGTTCAAATGCACCCAATGGAGAATTGGA
ATGGAAATTGACAATAATGTGAAAAGGGATGAAGTTGAACGTCTTGTGAGGGATCTAATG
GTCGGCGAGAAAGGTAAAGATATGAAGAAAAAGGCAATGGAGTGGAAGAAATTGGCTGAA
GAAGCTGCTGCAAAATCAACAGGATCATCTTATGTGAACATAGACAAGTTGATCAATGAA
ATTCTACTCAAACATTAG