Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079198
CDS Infomation

pacid=37472735 polypeptide=PGSC0003DMP400053689 locus=PGSC0003DMG402030822 ID=PGSC0003DMT400079198.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCACTGGTGCTGAACTTGATAAGCCTCATGCAGTTTGCATACCATATCCTGCC
CAAGGCCACATTAACCCAATGTTAAAATTAGCCAAAATCCTCAATCACAAAGGCTTTCAC
ATCACTTTTGTCAACACTGAATACAATCATAGGCGTCTCCTTAAGTCTCGAGGCCCTGAC
GGTCTCAAGAACTTGCCATCGTTCCGTTTTGAGGCAATTCCTGATGGCCTTCCACCATGT
GATGCTGATGCAACACAAGATATTATTGCTTTATGTAAATCAACAGATACCACTTGTTTA
GGTCCTTTCAGAGAGTTACTAGCCAAGCTCAATAATACTTGTTCATCTAAGGTGCCACCT
GTCTCGTGCATCGTCTCCGATGGTTCAATCAGCTTCACTCTAACTGCTGCCCAAGAATTG
GGTATCCCGCAAGTTTTCTTTTGGACTTTTGCTGCTTGTGGGACTTTAAGTTACATGCAT
TATTGTAACCTTGTTGATAAAGGATACATTCCACTTAAAGATGAAAGTTACTTGACAAAT
GGGTACTTAGAGAAGACGACTTTGGATTGGATACCGGGTATGAAAGACGTACGTTTAAAG
GATCTTCCAAGTTTTCTTAGGACTGCAAATCCAGATGATTTCATGCTTAACTTTATCATA
CGTGAAACGGAGAGATCGAAAAAATATGCTTCTGCTATTGTTGTCAATTCATTTGAGGCA
TTAGAGAAGGAAGTTCTTGAATCACTTCAAACACTTGTTCCTCCGGTGTATGTAATTGGA
CCATTAAATTTGCTTGTGAAACATGTTGATGACAAGAATTTGGCGGATTTGGGATCCAAT
CTTTGGAAAGAAGAACCAAAGTGTCTTGAATGGTTGGATTCCAAGAAACCAAATTCTGTT
GTTTATGTTAATTTTGGAAGTATTACTGTTATGACTATGAACCATCTTATCGAATTCGCC
TGGGGACTTGCCAATAGCCAGTTGGATTTTTTGTGGATTATAAGGCCTGATGTTGTATTA
GGAGAACAAGCAATTCTTCCACCCGAATTCGTGGAGGAAACTAAAGAAAGAGGGATGCTA
GCAAGCTGGTGCCAACAAGAAAAAGTCCTCAACCACCCCGCAATTGGAGGGTTCTTGACT
CACAGTGGATGGAACTCGACCCTTGAAAGTATTAGCAGTGGGGTGCCAATGATTTGCTGG
CCGTTTTTCGCAGAGCAGCCGACTAACTGTTGGTTTTGTTGCACCAAGTTGGGGATTGGA
ATGGAGATTAACAATAATGTGAAGAGGGGTGAAGTTGAAGCCCTTGTAAGAGAGCTGATG
ACCGGGGAGAAAGGCAAAGAGATGAAGAAAAAGGCAATGGAATGGAAGATATTGGCTGAA
GAAGCTGCTGCAAAACCAGCAGGATCATCTTATGTGAATATAGACAAATTGATCAATGAA
ATTCTCCTCTCTCCTAAACACTCGGTCGTTAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053689
PEP Infomation

pacid=37472735 transcript=PGSC0003DMT400079198 locus=PGSC0003DMG402030822 ID=PGSC0003DMT400079198.v4.03 annot-version=v4.03
Sequence

MASTGAELDKPHAVCIPYPAQGHINPMLKLAKILNHKGFHITFVNTEYNHRRLLKSRGPD
GLKNLPSFRFEAIPDGLPPCDADATQDIIALCKSTDTTCLGPFRELLAKLNNTCSSKVPP
VSCIVSDGSISFTLTAAQELGIPQVFFWTFAACGTLSYMHYCNLVDKGYIPLKDESYLTN
GYLEKTTLDWIPGMKDVRLKDLPSFLRTANPDDFMLNFIIRETERSKKYASAIVVNSFEA
LEKEVLESLQTLVPPVYVIGPLNLLVKHVDDKNLADLGSNLWKEEPKCLEWLDSKKPNSV
VYVNFGSITVMTMNHLIEFAWGLANSQLDFLWIIRPDVVLGEQAILPPEFVEETKERGML
ASWCQQEKVLNHPAIGGFLTHSGWNSTLESISSGVPMICWPFFAEQPTNCWFCCTKLGIG
MEINNNVKRGEVEALVRELMTGEKGKEMKKKAMEWKILAEEAAAKPAGSSYVNIDKLINE
ILLSPKHSVVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400079198
Transcript Infomation

pacid=37472735 locus=PGSC0003DMG402030822 ID=PGSC0003DMT400079198.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCACTGGTGCTGAACTTGATAAGCCTCATGCAGTTTGCATACCATATCCTGCC
CAAGGCCACATTAACCCAATGTTAAAATTAGCCAAAATCCTCAATCACAAAGGCTTTCAC
ATCACTTTTGTCAACACTGAATACAATCATAGGCGTCTCCTTAAGTCTCGAGGCCCTGAC
GGTCTCAAGAACTTGCCATCGTTCCGTTTTGAGGCAATTCCTGATGGCCTTCCACCATGT
GATGCTGATGCAACACAAGATATTATTGCTTTATGTAAATCAACAGATACCACTTGTTTA
GGTCCTTTCAGAGAGTTACTAGCCAAGCTCAATAATACTTGTTCATCTAAGGTGCCACCT
GTCTCGTGCATCGTCTCCGATGGTTCAATCAGCTTCACTCTAACTGCTGCCCAAGAATTG
GGTATCCCGCAAGTTTTCTTTTGGACTTTTGCTGCTTGTGGGACTTTAAGTTACATGCAT
TATTGTAACCTTGTTGATAAAGGATACATTCCACTTAAAGATGAAAGTTACTTGACAAAT
GGGTACTTAGAGAAGACGACTTTGGATTGGATACCGGGTATGAAAGACGTACGTTTAAAG
GATCTTCCAAGTTTTCTTAGGACTGCAAATCCAGATGATTTCATGCTTAACTTTATCATA
CGTGAAACGGAGAGATCGAAAAAATATGCTTCTGCTATTGTTGTCAATTCATTTGAGGCA
TTAGAGAAGGAAGTTCTTGAATCACTTCAAACACTTGTTCCTCCGGTGTATGTAATTGGA
CCATTAAATTTGCTTGTGAAACATGTTGATGACAAGAATTTGGCGGATTTGGGATCCAAT
CTTTGGAAAGAAGAACCAAAGTGTCTTGAATGGTTGGATTCCAAGAAACCAAATTCTGTT
GTTTATGTTAATTTTGGAAGTATTACTGTTATGACTATGAACCATCTTATCGAATTCGCC
TGGGGACTTGCCAATAGCCAGTTGGATTTTTTGTGGATTATAAGGCCTGATGTTGTATTA
GGAGAACAAGCAATTCTTCCACCCGAATTCGTGGAGGAAACTAAAGAAAGAGGGATGCTA
GCAAGCTGGTGCCAACAAGAAAAAGTCCTCAACCACCCCGCAATTGGAGGGTTCTTGACT
CACAGTGGATGGAACTCGACCCTTGAAAGTATTAGCAGTGGGGTGCCAATGATTTGCTGG
CCGTTTTTCGCAGAGCAGCCGACTAACTGTTGGTTTTGTTGCACCAAGTTGGGGATTGGA
ATGGAGATTAACAATAATGTGAAGAGGGGTGAAGTTGAAGCCCTTGTAAGAGAGCTGATG
ACCGGGGAGAAAGGCAAAGAGATGAAGAAAAAGGCAATGGAATGGAAGATATTGGCTGAA
GAAGCTGCTGCAAAACCAGCAGGATCATCTTATGTGAATATAGACAAATTGATCAATGAA
ATTCTCCTCTCTCCTAAACACTCGGTCGTTAAGTAA