Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079161
CDS Infomation

pacid=37474479 polypeptide=PGSC0003DMP400053664 locus=PGSC0003DMG400030812 ID=PGSC0003DMT400079161.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTTCAAGTACTAGCACTACCAACTCTCTTCTTTCCAACAAATCTTTGGTTCAA
AATCAACCCCTTTTGCCTTCTCCTTTAAAGAATGCATTTTTCTCCAACAACTCAACCAAA
ACCATTAGATTTGTTCAACCTATCTCAGCTGTTCATTCATCTGATTCTAACAAAAACCCC
ATTGTTTCCGATAAGCCCTCCAAGTCTTCTCCACCGGCGGCCACTGCCACCACGGCTCCG
GCTCCGGCTGTGACCAAAACTGAATGGGCTGTGGATAGCTGGAAATCTAAGAAGGCGCTT
CAACTACCGGAATACCCAAATCAAGAGGAGCTTAGATCTGTTCTTAAGACGATCGATGAG
TTCCCTCCTATCGTCTTTGCTGGTGAGGCTAGGAGCCTTGAAGAACGCCTTGGTGAGGCT
GCTATGGGAAGGGCGTTTTTGTTACAAGGAGGAGATTGTGCTGAGAGTTTCAAGGAATTC
AATGCTAATAATATTAGGGATACTTTCAGAATCCTCCTTCAAATGGGTGCTGTTCTTATG
TTTGGCGGTCAGATGCCTGTGATCAAGGTTGGAAGAATGGCTGGGCAATTTGCAAAGCCA
AGATCAGATTCATTTGAGGAGAAGGATGGTGTAAAGCTGCCGAGTTACAGGGGAGACAAT
GTCAACGGAGATGCATTTGATGTCAAGTCCAGGACTCCTGACCCCCAGAGGCTGATCAGG
GCCTATTGCCAATCTGCAGCTACTTTGAATCTGTTGAGGGCTTTCGCTACTGGAGGATAT
GCTGCCATGCAGAGGATCAATCAGTGGAACTTGGATTTCACAGAGCATAGTGAGCAGGGT
GATAGGTACCGTGAACTAGCTAGTAGAGTGGATGAGGCCCTTGGTTTCATGACTGCAGCT
GGACTTACAATGGACCATCCTATTATGAAAACCACTGAGTTCTGGACATCTCATGAGTGC
TTACTCTTGCCCTATGAGCAGTCACTAACACGTCGGGATTCAACTTCTGGCCTTTACTAT
GATTGCTCTGCTCATTTCCTTTGGGTTGGAGAGAGAACCAGGCAGTTGGATGGTGCCCAT
GTTGAGTTCTTGAGAGGAATTGCCAACCCTCTCGGTATTAAGGTGAGTGACAAGATGGAC
CCAAGTGCATTGGTCAAGCTCATTGAGATTTTGAACCCACAAAACAAAGCTGGAAGGATT
ACAATAATTACCAGAATGGGAGCAGAAAACATGAGGGTTAAACTTCCTCATCTTATCAGG
GCAGTCCGAAGTGCAGGACAAATTGTGACTTGGGTATCTGATCCTATGCACGGAAATACC
ATCAAGGCTCCTTGTGGTCTAAAAACTCGACCTTTTGATTCCATCAGGGCCGAGGTAAGA
GCATTCTTTGATGTTCATGATCAAGAAGGAAGCCACCCAGGAGGAGTTCATCTGGAGATG
ACAGGCCAAAACGTCACAGAGTGCATTGGTGGATCACGAACTGTGACCTTTGATGATCTG
AGCTCACGTTACCACACCCACTGTGATCCTAGGCTCAATGCATCTCAATCCCTTGAGCTC
TCGTTCATTATCGCAGAACGTTTGAGGAAAAGGAGGCTCGGATCGCAAAGCGTTTTAGGG
CAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400053664
PEP Infomation

pacid=37474479 transcript=PGSC0003DMT400079161 locus=PGSC0003DMG400030812 ID=PGSC0003DMT400079161.v4.03 annot-version=v4.03
Sequence

MALSSTSTTNSLLSNKSLVQNQPLLPSPLKNAFFSNNSTKTIRFVQPISAVHSSDSNKNP
IVSDKPSKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDE
FPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLM
FGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIR
AYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTAA
GLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAH
VEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIR
AVRSAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEM
TGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGSQSVLG
Q*

Transcript Sequence

Transcript ID

PGSC0003DMT400079161
Transcript Infomation

pacid=37474479 locus=PGSC0003DMG400030812 ID=PGSC0003DMT400079161.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTTCAAGTACTAGCACTACCAACTCTCTTCTTTCCAACAAATCTTTGGTTCAA
AATCAACCCCTTTTGCCTTCTCCTTTAAAGAATGCATTTTTCTCCAACAACTCAACCAAA
ACCATTAGATTTGTTCAACCTATCTCAGCTGTTCATTCATCTGATTCTAACAAAAACCCC
ATTGTTTCCGATAAGCCCTCCAAGTCTTCTCCACCGGCGGCCACTGCCACCACGGCTCCG
GCTCCGGCTGTGACCAAAACTGAATGGGCTGTGGATAGCTGGAAATCTAAGAAGGCGCTT
CAACTACCGGAATACCCAAATCAAGAGGAGCTTAGATCTGTTCTTAAGACGATCGATGAG
TTCCCTCCTATCGTCTTTGCTGGTGAGGCTAGGAGCCTTGAAGAACGCCTTGGTGAGGCT
GCTATGGGAAGGGCGTTTTTGTTACAAGGAGGAGATTGTGCTGAGAGTTTCAAGGAATTC
AATGCTAATAATATTAGGGATACTTTCAGAATCCTCCTTCAAATGGGTGCTGTTCTTATG
TTTGGCGGTCAGATGCCTGTGATCAAGGTTGGAAGAATGGCTGGGCAATTTGCAAAGCCA
AGATCAGATTCATTTGAGGAGAAGGATGGTGTAAAGCTGCCGAGTTACAGGGGAGACAAT
GTCAACGGAGATGCATTTGATGTCAAGTCCAGGACTCCTGACCCCCAGAGGCTGATCAGG
GCCTATTGCCAATCTGCAGCTACTTTGAATCTGTTGAGGGCTTTCGCTACTGGAGGATAT
GCTGCCATGCAGAGGATCAATCAGTGGAACTTGGATTTCACAGAGCATAGTGAGCAGGGT
GATAGGTACCGTGAACTAGCTAGTAGAGTGGATGAGGCCCTTGGTTTCATGACTGCAGCT
GGACTTACAATGGACCATCCTATTATGAAAACCACTGAGTTCTGGACATCTCATGAGTGC
TTACTCTTGCCCTATGAGCAGTCACTAACACGTCGGGATTCAACTTCTGGCCTTTACTAT
GATTGCTCTGCTCATTTCCTTTGGGTTGGAGAGAGAACCAGGCAGTTGGATGGTGCCCAT
GTTGAGTTCTTGAGAGGAATTGCCAACCCTCTCGGTATTAAGGTGAGTGACAAGATGGAC
CCAAGTGCATTGGTCAAGCTCATTGAGATTTTGAACCCACAAAACAAAGCTGGAAGGATT
ACAATAATTACCAGAATGGGAGCAGAAAACATGAGGGTTAAACTTCCTCATCTTATCAGG
GCAGTCCGAAGTGCAGGACAAATTGTGACTTGGGTATCTGATCCTATGCACGGAAATACC
ATCAAGGCTCCTTGTGGTCTAAAAACTCGACCTTTTGATTCCATCAGGGCCGAGGTAAGA
GCATTCTTTGATGTTCATGATCAAGAAGGAAGCCACCCAGGAGGAGTTCATCTGGAGATG
ACAGGCCAAAACGTCACAGAGTGCATTGGTGGATCACGAACTGTGACCTTTGATGATCTG
AGCTCACGTTACCACACCCACTGTGATCCTAGGCTCAATGCATCTCAATCCCTTGAGCTC
TCGTTCATTATCGCAGAACGTTTGAGGAAAAGGAGGCTCGGATCGCAAAGCGTTTTAGGG
CAATAG