Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079159
CDS Infomation

pacid=37471899 polypeptide=PGSC0003DMP400053662 locus=PGSC0003DMG400030810 ID=PGSC0003DMT400079159.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTCATCAATACAACTTTTTCTTTTTTACTTCAACTTTCAATTGCTCTTTCT
TTCTTTCATTTCTGTGTAGCAACAAGGAAACTTGAAGAACAAACTGATCTCTATAAGTTC
CATTACCATAATGGCCCTCTTCTTACTGGTAAAATCTCAATTAACCTTATTTGGTATGGC
AAGTTCAAGCCCAATCAACGTGCAATTATCTCAGATTTCATCACCTCCTTATCCTCTTCT
TCAACAAAAATCTCTCCCAACCAACCATCTGTAGCCACGTGGTGGAAATCGACTGATAAA
TATTTCAGTTTACTAAAATCCAAAAAATCATCTCCTTTATTTCTATCACTTGGTAATCAA
ATATTGGACGAGAGTTATTCTCTTGGAAAATCACTTAAAGATGAACATATTAAACAATTA
GCAGCTAAAGGCGATAAAAAAAATGCAATTAACATTGTGTTAACGGCGTCTGACGTAGCC
GTTGGTCGGTTCTGTACCAGCCGATGTGGGACACATGGATCTTCTTTGAGTCCCAACAAT
ACCCCTCCCAAGGGCAAGATTTACAAATTTGCCTATATTTGGGTTGGTAATTCGGAGAAG
CAATGTCCGGATCAATGCGCGTGGCCGTTTCACCAACCCATCTACGGACCCCAGGGTCCA
GCCCTGGTCGCACCCAACAATGATGTGGGCTCGGATGGGATGGTGATAAACTTGGCTAGC
TTATTGGCTGGGACCGTGACGAACCCTTTTGGAAACGGTTACTATCAAGGATTAGCTGAC
GCGCCACTAGAGGCAGCGTCAGCTTGTCCTGGAGTTTATGGGAGTGGGGCCTACCCTGGA
TACGCTGGCAATTTGTTGGTGGATCCTACTACTGGTGCTAGCTACAATGCGCATGGTGCT
AATGGGAGGAAGTTCTTGCTACCGGCATTATTTAACCCTTCCACATCCTCATGTTCTACT
TTGGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053662
PEP Infomation

pacid=37471899 transcript=PGSC0003DMT400079159 locus=PGSC0003DMG400030810 ID=PGSC0003DMT400079159.v4.03 annot-version=v4.03
Sequence

MASLINTTFSFLLQLSIALSFFHFCVATRKLEEQTDLYKFHYHNGPLLTGKISINLIWYG
KFKPNQRAIISDFITSLSSSSTKISPNQPSVATWWKSTDKYFSLLKSKKSSPLFLSLGNQ
ILDESYSLGKSLKDEHIKQLAAKGDKKNAINIVLTASDVAVGRFCTSRCGTHGSSLSPNN
TPPKGKIYKFAYIWVGNSEKQCPDQCAWPFHQPIYGPQGPALVAPNNDVGSDGMVINLAS
LLAGTVTNPFGNGYYQGLADAPLEAASACPGVYGSGAYPGYAGNLLVDPTTGASYNAHGA
NGRKFLLPALFNPSTSSCSTLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400079159
Transcript Infomation

pacid=37471899 locus=PGSC0003DMG400030810 ID=PGSC0003DMT400079159.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCTCATCAATACAACTTTTTCTTTTTTACTTCAACTTTCAATTGCTCTTTCT
TTCTTTCATTTCTGTGTAGCAACAAGGAAACTTGAAGAACAAACTGATCTCTATAAGTTC
CATTACCATAATGGCCCTCTTCTTACTGGTAAAATCTCAATTAACCTTATTTGGTATGGC
AAGTTCAAGCCCAATCAACGTGCAATTATCTCAGATTTCATCACCTCCTTATCCTCTTCT
TCAACAAAAATCTCTCCCAACCAACCATCTGTAGCCACGTGGTGGAAATCGACTGATAAA
TATTTCAGTTTACTAAAATCCAAAAAATCATCTCCTTTATTTCTATCACTTGGTAATCAA
ATATTGGACGAGAGTTATTCTCTTGGAAAATCACTTAAAGATGAACATATTAAACAATTA
GCAGCTAAAGGCGATAAAAAAAATGCAATTAACATTGTGTTAACGGCGTCTGACGTAGCC
GTTGGTCGGTTCTGTACCAGCCGATGTGGGACACATGGATCTTCTTTGAGTCCCAACAAT
ACCCCTCCCAAGGGCAAGATTTACAAATTTGCCTATATTTGGGTTGGTAATTCGGAGAAG
CAATGTCCGGATCAATGCGCGTGGCCGTTTCACCAACCCATCTACGGACCCCAGGGTCCA
GCCCTGGTCGCACCCAACAATGATGTGGGCTCGGATGGGATGGTGATAAACTTGGCTAGC
TTATTGGCTGGGACCGTGACGAACCCTTTTGGAAACGGTTACTATCAAGGATTAGCTGAC
GCGCCACTAGAGGCAGCGTCAGCTTGTCCTGGAGTTTATGGGAGTGGGGCCTACCCTGGA
TACGCTGGCAATTTGTTGGTGGATCCTACTACTGGTGCTAGCTACAATGCGCATGGTGCT
AATGGGAGGAAGTTCTTGCTACCGGCATTATTTAACCCTTCCACATCCTCATGTTCTACT
TTGGTTTGA