Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079158
CDS Infomation

pacid=37475365 polypeptide=PGSC0003DMP400053661 locus=PGSC0003DMG400030809 ID=PGSC0003DMT400079158.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCCCATTTCATTTTATCACTTTTTGTATTGATTTCTTTCATCAATGTGTGT
TTTGCTTCAAGAAAGCTAACTGCATTAGTAGAACAAACTCAGCTGTTGCAGTACCACAAG
GGTGCACTTCTTTCTGGGAAAATATCAGTCAATTTGATTTGGTATGGCAAATTCAAGCCA
TCCCAAAGAGCTATTGTATCCGATTTCATTAACTCCCTTTCTTCTTCAACTCCATCGAAA
ACCAATCCTTCAGTAGCACAATGGTGGAAAACCACTGAAAAATACTACTATCTTGCCAAT
TCTAAGAACACCCTTTCCCTCTCTTTGGGCAAACAAGTTCTCATCGAAAATTATTCCCTT
GGAAAATCACTGACCCAAAAGCAAATCGTGCAATTAGCATCAAAGGGTGAACAGAAAGAC
GCTATTAACGTTGTTTTGACCGCTTCTGATGTTGCAGTTGATGGTTTCTGCGTCAATCGG
TGTGGAACTCATGGGGCTTCTAAGGGTGCAGTTATTAACGGCAAAACTTACAAATTTGCT
TATATTTGGGTTGGTAACTCAGAGACTCTGTGTCCTGGTTACTGCGCCTGGCCATTCCAC
CAGCCCATCTACGGACCGCAGACCCCACCATTGGGTGCACCAAACAACGATGTTGGTGTT
GACGGTATGGTTATTAACTTAGCTAGCTTATTAGCTGGAACTGCTACGAACCCATTTGGA
AACGGTTATTACCAGGGTGAAGCAGATGCGCCATTAGAAGCTGCATCTGCTTGCCCTGGT
GTCTACGCTAAGGGCGCTTACCCAGGCTATCCTGGAGATTTATTAGTGGACAAAACAACA
GGTGCAAGCTACAATGCACATGGTACAAATGGAAGGAAATACTTGGTTCCTGCTTTGTAT
GATCCTGCTACATTCACATGCTCCACTTTGGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053661
PEP Infomation

pacid=37475365 transcript=PGSC0003DMT400079158 locus=PGSC0003DMG400030809 ID=PGSC0003DMT400079158.v4.03 annot-version=v4.03
Sequence

MSSSHFILSLFVLISFINVCFASRKLTALVEQTQLLQYHKGALLSGKISVNLIWYGKFKP
SQRAIVSDFINSLSSSTPSKTNPSVAQWWKTTEKYYYLANSKNTLSLSLGKQVLIENYSL
GKSLTQKQIVQLASKGEQKDAINVVLTASDVAVDGFCVNRCGTHGASKGAVINGKTYKFA
YIWVGNSETLCPGYCAWPFHQPIYGPQTPPLGAPNNDVGVDGMVINLASLLAGTATNPFG
NGYYQGEADAPLEAASACPGVYAKGAYPGYPGDLLVDKTTGASYNAHGTNGRKYLVPALY
DPATFTCSTLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400079158
Transcript Infomation

pacid=37475365 locus=PGSC0003DMG400030809 ID=PGSC0003DMT400079158.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCCCATTTCATTTTATCACTTTTTGTATTGATTTCTTTCATCAATGTGTGT
TTTGCTTCAAGAAAGCTAACTGCATTAGTAGAACAAACTCAGCTGTTGCAGTACCACAAG
GGTGCACTTCTTTCTGGGAAAATATCAGTCAATTTGATTTGGTATGGCAAATTCAAGCCA
TCCCAAAGAGCTATTGTATCCGATTTCATTAACTCCCTTTCTTCTTCAACTCCATCGAAA
ACCAATCCTTCAGTAGCACAATGGTGGAAAACCACTGAAAAATACTACTATCTTGCCAAT
TCTAAGAACACCCTTTCCCTCTCTTTGGGCAAACAAGTTCTCATCGAAAATTATTCCCTT
GGAAAATCACTGACCCAAAAGCAAATCGTGCAATTAGCATCAAAGGGTGAACAGAAAGAC
GCTATTAACGTTGTTTTGACCGCTTCTGATGTTGCAGTTGATGGTTTCTGCGTCAATCGG
TGTGGAACTCATGGGGCTTCTAAGGGTGCAGTTATTAACGGCAAAACTTACAAATTTGCT
TATATTTGGGTTGGTAACTCAGAGACTCTGTGTCCTGGTTACTGCGCCTGGCCATTCCAC
CAGCCCATCTACGGACCGCAGACCCCACCATTGGGTGCACCAAACAACGATGTTGGTGTT
GACGGTATGGTTATTAACTTAGCTAGCTTATTAGCTGGAACTGCTACGAACCCATTTGGA
AACGGTTATTACCAGGGTGAAGCAGATGCGCCATTAGAAGCTGCATCTGCTTGCCCTGGT
GTCTACGCTAAGGGCGCTTACCCAGGCTATCCTGGAGATTTATTAGTGGACAAAACAACA
GGTGCAAGCTACAATGCACATGGTACAAATGGAAGGAAATACTTGGTTCCTGCTTTGTAT
GATCCTGCTACATTCACATGCTCCACTTTGGTCTAG