Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079111
CDS Infomation

pacid=37453579 polypeptide=PGSC0003DMP400053627 locus=PGSC0003DMG400030788 ID=PGSC0003DMT400079111.v4.03 annot-version=v4.03
Sequence

ATGAATAGCTCTTCTCAGCTGGCGAGTTTCTTCTTCCTCATCTTCATCATAGCGTTCATA
CACGAATCATCCAGCTCAGCGATCATCAATCCATCTAAGTCCAAGCAAATTTCATGGAAA
CCTAGAGCTTTTGTATATGAAGGATTTCTTACGGATGAAGAATGCAATCACTTGATATCA
CTCGCAAAATCGGAGTTGAAGAGATCTGCTGTGGCAGATAATGAGTCTGGAAAGAGTAAG
CACAGTGAGGTTAGGACCAGCTCTGGAATGTTCATTTCCAAAGCTAAGGATCCTATTGTC
TCAGGGATAGAGGATAAGATCGCAACTTGGACCTTTCTACCCAAAGAAAATGGAGAAGAA
ATACAAGTACTACGATATGAGGAGGGGCAGAAATATGAGCCGCACTATGATTACTTTGTA
GACAAGGTTAATATTGCTCGAGGTGGACACAGGTTTGCCACTGTACTTATGTATCTCACA
GATGTTGAAAAGGGAGGTGAGACTGTCTTCCCAAAAGCAGAGGAATCTCATCGACGTAGG
TCAATGGCAGCGGATGACAGTTTGTCTGAATGTGCAAAGAAGGGCATAGCAGTGAAGCCA
CGGAAAGGAGATGCCCTGCTTTTCTATAGTCTCCATCCAAATGCCACTCCTGATCCTATT
AGCCTCCATGGTGGGTGCCCTGTACTTCAAGGTGAGAAATGGTCAGCAACAAAGTGGATT
CATGTGGATTCCTTTGACAAAACTGTGGGTACCGATGGAAATTGCACCGATGCTGATGAG
AATTGTGAGAGATGGGCTGCTCTTGGCGAATGCACCAAGAATCCAGAGTATATGCTGGGA
AGTGCAGGCCTTCCAGGATATTGTAGGAAGAGCTGCAAAGCATGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053627
PEP Infomation

pacid=37453579 transcript=PGSC0003DMT400079111 locus=PGSC0003DMG400030788 ID=PGSC0003DMT400079111.v4.03 annot-version=v4.03
Sequence

MNSSSQLASFFFLIFIIAFIHESSSSAIINPSKSKQISWKPRAFVYEGFLTDEECNHLIS
LAKSELKRSAVADNESGKSKHSEVRTSSGMFISKAKDPIVSGIEDKIATWTFLPKENGEE
IQVLRYEEGQKYEPHYDYFVDKVNIARGGHRFATVLMYLTDVEKGGETVFPKAEESHRRR
SMAADDSLSECAKKGIAVKPRKGDALLFYSLHPNATPDPISLHGGCPVLQGEKWSATKWI
HVDSFDKTVGTDGNCTDADENCERWAALGECTKNPEYMLGSAGLPGYCRKSCKAC*

Transcript Sequence

Transcript ID

PGSC0003DMT400079111
Transcript Infomation

pacid=37453579 locus=PGSC0003DMG400030788 ID=PGSC0003DMT400079111.v4.03 annot-version=v4.03
Sequence

ATGAATAGCTCTTCTCAGCTGGCGAGTTTCTTCTTCCTCATCTTCATCATAGCGTTCATA
CACGAATCATCCAGCTCAGCGATCATCAATCCATCTAAGTCCAAGCAAATTTCATGGAAA
CCTAGAGCTTTTGTATATGAAGGATTTCTTACGGATGAAGAATGCAATCACTTGATATCA
CTCGCAAAATCGGAGTTGAAGAGATCTGCTGTGGCAGATAATGAGTCTGGAAAGAGTAAG
CACAGTGAGGTTAGGACCAGCTCTGGAATGTTCATTTCCAAAGCTAAGGATCCTATTGTC
TCAGGGATAGAGGATAAGATCGCAACTTGGACCTTTCTACCCAAAGAAAATGGAGAAGAA
ATACAAGTACTACGATATGAGGAGGGGCAGAAATATGAGCCGCACTATGATTACTTTGTA
GACAAGGTTAATATTGCTCGAGGTGGACACAGGTTTGCCACTGTACTTATGTATCTCACA
GATGTTGAAAAGGGAGGTGAGACTGTCTTCCCAAAAGCAGAGGAATCTCATCGACGTAGG
TCAATGGCAGCGGATGACAGTTTGTCTGAATGTGCAAAGAAGGGCATAGCAGTGAAGCCA
CGGAAAGGAGATGCCCTGCTTTTCTATAGTCTCCATCCAAATGCCACTCCTGATCCTATT
AGCCTCCATGGTGGGTGCCCTGTACTTCAAGGTGAGAAATGGTCAGCAACAAAGTGGATT
CATGTGGATTCCTTTGACAAAACTGTGGGTACCGATGGAAATTGCACCGATGCTGATGAG
AATTGTGAGAGATGGGCTGCTCTTGGCGAATGCACCAAGAATCCAGAGTATATGCTGGGA
AGTGCAGGCCTTCCAGGATATTGTAGGAAGAGCTGCAAAGCATGTTAA