Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079102
CDS Infomation

pacid=37450159 polypeptide=PGSC0003DMP400053620 locus=PGSC0003DMG400030785 ID=PGSC0003DMT400079102.v4.03 annot-version=v4.03
Sequence

ATGGGGAAACCGTCGAGAGATAGATCATCATCGGAGGAGTCTGTATCGGAAAGTTCCGAG
GAGGAGCAAGTCCAAGGTCAGGTCAATGACGAGGAAGACGAAGAGGAACTTGAGGCCGTC
GCCAGGGCCGCTGAGGACTCCGACGAAGAGGAAGACGATGATGCTCCTACCGATGGAGCA
GACCAAGAAGATGAGGAAGAGGTTGCAGTCAATGAAATCTCAAAGCGTGAAAAGGCCAGG
TTGAAAGAGATGCAGAGGATGAAGAAGCAGAAAATACAAGATATGTTGGATTCACAGAAT
GCTGCCATTGAGGCTGACATGAATGTCAAGGGACAGGGGCGATTGAAGTATCTCTTACAG
CAAACTGAGTTATTTGCACATTTTGCCAAAGGTGAGCAGTCCACAGCTCCAAAGAAAACA
AAAGGAAGGGGTCGTCATGCATCAAAGGTAACTGAAGAGGAAGAAGATGAAGAGTATCTC
AAAGATGAAGATGAACTTTCTGGGAATACACGACTTGTGGCACAACCATCCTGTATTCAA
GGGAAGATGAGGGATTATCAACTTGCTGGTTTAAACTGGCTGATTCGACTGTATGAGAAT
GGAATAAATGGAATACTTGCTGATGAAATGGGTCTTGGTAAGACGTTGCAAACCATCTCC
TTGATGGGCTACCTACATGAATTTAGAGGAATAACTGGTCCTCACATGGTTGTTGCTCCA
AAATCCACGCTTGGCAATTGGATGAATGAAATCAAACGTTTCTGCCCTGTTTTACGTGCT
GTTAAGTTCCTTGGAAATCCGGATGAAAGGAGATACATACGTGAGGAACTACTTGTTGCA
GGGAAGTTTGATGTGTGTGTCACAAGCTTTGAGATGGTTATCAAAGAGAAGTCTGCTTTA
CGACGCTTTAATTGGCGTTACATCATAATTGATGAGGCACATAGGATCAAGAATGAAAAT
TCTCTTCTTTCAAAAACAATGAGGCTCTACAACACTAATTATAGATTGCTTATCACGGGG
ACACCGCTTCAGAATAATCTTCATGAACTCTGGGCACTGCTGAACTTTCTGCTGCCTGAG
ATCTTTAGCTCAGCTGAGACTTTTGATGAGTGGTTCCAGATTTCTGGTGAGACTGACCAG
CAGGAAGTGGTCCAACAGCTTCATAAGGTCCTGCGTCCATTTCTTCTTAGGAGGCTGAAG
TCTGATGTGGAGAAAGGTCTTCCTCCCAAAAAAGAAACAATTCTTAAGGTCGGTATGTCC
CAGATGCAGAAGCAGTACTACAAGGCTTTGCTGCAGAAAGATCTTGAGGTTGTCAATTCT
GGAGGGGAGCGCAAGCGTCTTCTCAATATAGCAATGCAACTACGAAAATGCTGTAACCAT
CCATATCTTTTTCAAGGTGCTGAGCCAGGACCTCCATATACAACAGGAGAGCATCTTGTA
GAAAATGCTGGGAAAATGGTTCTTCTGGACAAGTTGCTTCCTAAATTGAAGGAACGTGGC
TCAAGGGTTTTAATATTTTCACAGATGACAAGGCTATTGGACATCCTTGAAGACTACTTA
TTGTTCCGAGGTCACCAGTATTGCCGGATCGATGGAAATACTGGTGGTGAGGATCGTGAT
GCTTCTATTGAGGTTTTTAACAAACCAGGGAGTGAAAAATTTGCCTTCTTATTGTCAACC
AGAGCTGGTGGTCTTGGTATCAATCTTGCTACAGCAGATATTGTTATTCTTTATGATAGT
GACTGGAATCCACAGGTTGATTTGCAGGCTCAGGACCGGGCCCATAGGATTGGTCAGAAG
AAGGAAGTCCAAGTGTTCCGCTTCTGCACTGAGTATACCATTGAGGAAAAGGTGATTGAA
AAGGCTTACAAAAAGCTTGCACTTGATGCATTGGTTATCCAGCAGGGGCGGCTAGCTGAG
CAAAAAACTGTTAACAAGGATGAGCTGCTGCAAATGGTGCGCTTTGGTGCTGAAATGGTT
TTCAGTGCTAAAGATAGCACCATTACTGATGAGGATATAGATAGAATAATAGCTAAGGGA
GAAGAGGCAACAGCTGAACTTGATGCTAAGATGAAGAAGTTTACAGAAGATGCTATCAAG
TTTAAGATGGATGACACTGCTGAATTGTATGACTTCGATGACGAGAAGGATGAAAACAAG
GTGGATTTCAAGAAGATTGTCAGCGACAATTGGATAGAACCTCCAAAAAGAGAAAGAAAA
CGCAATTATTCAGAGTCTGAATACTTCAAGCAAACCATGCGTCAAAGTGGCCCTGCAAGA
CCTAAAGAGCCTCGGATTCCTCGGATGCCGCAGCTGCATGACTTTCAGTTCTTCAATACA
CAGAGACTGAGTGAGTTGTATGAGAAGGAAGTGCGCTATCTTATGACACACCAGAAGAAT
CAGGTCAAAGACACTATAGATATGGAAGAACCTGAAGATGCAGGAGAGCCTTTAACGGCT
GAAGAGCAGGAAGAAAAGGAGCAACTTTTGGAAGAGGGATTTTCAATGTGGAGTAGAAGA
GACTTCAATACTTTTATCAGGGCTTGTGAGAAGTATGGCCGCAATGACTTAAAAAGTATT
GCTGCTGAAATGGAAGGGAAAACAGAGGAGGAGGTTGAAAGATATGCACATGTTTTCAAA
GAAAGATACAAAGAACTAAATGATTATGATCGGATTATTAAGAACATTGAAAGAGGAGAG
TCTAGAATTTCGCGGAGAGATGAGATTATGAAAGCAATTGGTAAGAAGCTGGATCGGTAT
AAAAATCCATGGTTGGAATTGAAGATCCAGTATGGTCAGAACAAAGGAAAGCTGTATAAC
GAGGAGTGTGATCGTTTCATGATATGTATGGTTCACAAGCTTGGCCATGGAAATTGGGAT
GAGCTGAAAGCTGCATTTCGCCAATCAACCTTGTTCAAATTTGATTGGTTTGTGAAGTCT
CGTACCACTCAAGAACTTGCCAGAAGATGCGATGCACTTATTCGATTGATTGAGAGGGAA
AATCAAGAATATGATGAGAGGGAGAGGCAGGCACGCAAAGAAAAGAAGCTTGCGAAGAAC
ACGACCCCATCAAAGCGCACTTTGGCAAGACAGGCAGCCGAAAGCCCCTCTGCTCTGAAG
AAGCGGAAGCAATTGTCAATGGATGACTATGTCAGCTCAGGAAAGAGGAGAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400053620
PEP Infomation

pacid=37450159 transcript=PGSC0003DMT400079102 locus=PGSC0003DMG400030785 ID=PGSC0003DMT400079102.v4.03 annot-version=v4.03
Sequence

MGKPSRDRSSSEESVSESSEEEQVQGQVNDEEDEEELEAVARAAEDSDEEEDDDAPTDGA
DQEDEEEVAVNEISKREKARLKEMQRMKKQKIQDMLDSQNAAIEADMNVKGQGRLKYLLQ
QTELFAHFAKGEQSTAPKKTKGRGRHASKVTEEEEDEEYLKDEDELSGNTRLVAQPSCIQ
GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGITGPHMVVAP
KSTLGNWMNEIKRFCPVLRAVKFLGNPDERRYIREELLVAGKFDVCVTSFEMVIKEKSAL
RRFNWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWALLNFLLPE
IFSSAETFDEWFQISGETDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMS
QMQKQYYKALLQKDLEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV
ENAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLLFRGHQYCRIDGNTGGEDRD
ASIEVFNKPGSEKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQK
KEVQVFRFCTEYTIEEKVIEKAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAEMV
FSAKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDEKDENK
VDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQSGPARPKEPRIPRMPQLHDFQFFNT
QRLSELYEKEVRYLMTHQKNQVKDTIDMEEPEDAGEPLTAEEQEEKEQLLEEGFSMWSRR
DFNTFIRACEKYGRNDLKSIAAEMEGKTEEEVERYAHVFKERYKELNDYDRIIKNIERGE
SRISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGHGNWD
ELKAAFRQSTLFKFDWFVKSRTTQELARRCDALIRLIERENQEYDERERQARKEKKLAKN
TTPSKRTLARQAAESPSALKKRKQLSMDDYVSSGKRRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400079102
Transcript Infomation

pacid=37450159 locus=PGSC0003DMG400030785 ID=PGSC0003DMT400079102.v4.03 annot-version=v4.03
Sequence

ATGGGGAAACCGTCGAGAGATAGATCATCATCGGAGGAGTCTGTATCGGAAAGTTCCGAG
GAGGAGCAAGTCCAAGGTCAGGTCAATGACGAGGAAGACGAAGAGGAACTTGAGGCCGTC
GCCAGGGCCGCTGAGGACTCCGACGAAGAGGAAGACGATGATGCTCCTACCGATGGAGCA
GACCAAGAAGATGAGGAAGAGGTTGCAGTCAATGAAATCTCAAAGCGTGAAAAGGCCAGG
TTGAAAGAGATGCAGAGGATGAAGAAGCAGAAAATACAAGATATGTTGGATTCACAGAAT
GCTGCCATTGAGGCTGACATGAATGTCAAGGGACAGGGGCGATTGAAGTATCTCTTACAG
CAAACTGAGTTATTTGCACATTTTGCCAAAGGTGAGCAGTCCACAGCTCCAAAGAAAACA
AAAGGAAGGGGTCGTCATGCATCAAAGGTAACTGAAGAGGAAGAAGATGAAGAGTATCTC
AAAGATGAAGATGAACTTTCTGGGAATACACGACTTGTGGCACAACCATCCTGTATTCAA
GGGAAGATGAGGGATTATCAACTTGCTGGTTTAAACTGGCTGATTCGACTGTATGAGAAT
GGAATAAATGGAATACTTGCTGATGAAATGGGTCTTGGTAAGACGTTGCAAACCATCTCC
TTGATGGGCTACCTACATGAATTTAGAGGAATAACTGGTCCTCACATGGTTGTTGCTCCA
AAATCCACGCTTGGCAATTGGATGAATGAAATCAAACGTTTCTGCCCTGTTTTACGTGCT
GTTAAGTTCCTTGGAAATCCGGATGAAAGGAGATACATACGTGAGGAACTACTTGTTGCA
GGGAAGTTTGATGTGTGTGTCACAAGCTTTGAGATGGTTATCAAAGAGAAGTCTGCTTTA
CGACGCTTTAATTGGCGTTACATCATAATTGATGAGGCACATAGGATCAAGAATGAAAAT
TCTCTTCTTTCAAAAACAATGAGGCTCTACAACACTAATTATAGATTGCTTATCACGGGG
ACACCGCTTCAGAATAATCTTCATGAACTCTGGGCACTGCTGAACTTTCTGCTGCCTGAG
ATCTTTAGCTCAGCTGAGACTTTTGATGAGTGGTTCCAGATTTCTGGTGAGACTGACCAG
CAGGAAGTGGTCCAACAGCTTCATAAGGTCCTGCGTCCATTTCTTCTTAGGAGGCTGAAG
TCTGATGTGGAGAAAGGTCTTCCTCCCAAAAAAGAAACAATTCTTAAGGTCGGTATGTCC
CAGATGCAGAAGCAGTACTACAAGGCTTTGCTGCAGAAAGATCTTGAGGTTGTCAATTCT
GGAGGGGAGCGCAAGCGTCTTCTCAATATAGCAATGCAACTACGAAAATGCTGTAACCAT
CCATATCTTTTTCAAGGTGCTGAGCCAGGACCTCCATATACAACAGGAGAGCATCTTGTA
GAAAATGCTGGGAAAATGGTTCTTCTGGACAAGTTGCTTCCTAAATTGAAGGAACGTGGC
TCAAGGGTTTTAATATTTTCACAGATGACAAGGCTATTGGACATCCTTGAAGACTACTTA
TTGTTCCGAGGTCACCAGTATTGCCGGATCGATGGAAATACTGGTGGTGAGGATCGTGAT
GCTTCTATTGAGGTTTTTAACAAACCAGGGAGTGAAAAATTTGCCTTCTTATTGTCAACC
AGAGCTGGTGGTCTTGGTATCAATCTTGCTACAGCAGATATTGTTATTCTTTATGATAGT
GACTGGAATCCACAGGTTGATTTGCAGGCTCAGGACCGGGCCCATAGGATTGGTCAGAAG
AAGGAAGTCCAAGTGTTCCGCTTCTGCACTGAGTATACCATTGAGGAAAAGGTGATTGAA
AAGGCTTACAAAAAGCTTGCACTTGATGCATTGGTTATCCAGCAGGGGCGGCTAGCTGAG
CAAAAAACTGTTAACAAGGATGAGCTGCTGCAAATGGTGCGCTTTGGTGCTGAAATGGTT
TTCAGTGCTAAAGATAGCACCATTACTGATGAGGATATAGATAGAATAATAGCTAAGGGA
GAAGAGGCAACAGCTGAACTTGATGCTAAGATGAAGAAGTTTACAGAAGATGCTATCAAG
TTTAAGATGGATGACACTGCTGAATTGTATGACTTCGATGACGAGAAGGATGAAAACAAG
GTGGATTTCAAGAAGATTGTCAGCGACAATTGGATAGAACCTCCAAAAAGAGAAAGAAAA
CGCAATTATTCAGAGTCTGAATACTTCAAGCAAACCATGCGTCAAAGTGGCCCTGCAAGA
CCTAAAGAGCCTCGGATTCCTCGGATGCCGCAGCTGCATGACTTTCAGTTCTTCAATACA
CAGAGACTGAGTGAGTTGTATGAGAAGGAAGTGCGCTATCTTATGACACACCAGAAGAAT
CAGGTCAAAGACACTATAGATATGGAAGAACCTGAAGATGCAGGAGAGCCTTTAACGGCT
GAAGAGCAGGAAGAAAAGGAGCAACTTTTGGAAGAGGGATTTTCAATGTGGAGTAGAAGA
GACTTCAATACTTTTATCAGGGCTTGTGAGAAGTATGGCCGCAATGACTTAAAAAGTATT
GCTGCTGAAATGGAAGGGAAAACAGAGGAGGAGGTTGAAAGATATGCACATGTTTTCAAA
GAAAGATACAAAGAACTAAATGATTATGATCGGATTATTAAGAACATTGAAAGAGGAGAG
TCTAGAATTTCGCGGAGAGATGAGATTATGAAAGCAATTGGTAAGAAGCTGGATCGGTAT
AAAAATCCATGGTTGGAATTGAAGATCCAGTATGGTCAGAACAAAGGAAAGCTGTATAAC
GAGGAGTGTGATCGTTTCATGATATGTATGGTTCACAAGCTTGGCCATGGAAATTGGGAT
GAGCTGAAAGCTGCATTTCGCCAATCAACCTTGTTCAAATTTGATTGGTTTGTGAAGTCT
CGTACCACTCAAGAACTTGCCAGAAGATGCGATGCACTTATTCGATTGATTGAGAGGGAA
AATCAAGAATATGATGAGAGGGAGAGGCAGGCACGCAAAGAAAAGAAGCTTGCGAAGAAC
ACGACCCCATCAAAGCGCACTTTGGCAAGACAGGCAGCCGAAAGCCCCTCTGCTCTGAAG
AAGCGGAAGCAATTGTCAATGGATGACTATGTCAGCTCAGGAAAGAGGAGAAAATGA