Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400079098
CDS Infomation

pacid=37452736 polypeptide=PGSC0003DMP400053616 locus=PGSC0003DMG400030783 ID=PGSC0003DMT400079098.v4.03 annot-version=v4.03
Sequence

ATGGACTCTAGATTTAAGGTAATTACCACTGCCGTTGCCCGGAAATCATGTCCGATATGC
CTCTGCCGGCTGCACCATCGGAGCGCGGCGGTTGTTATCCCATGTATGCACGCCTATTGC
ATCGTTTGCATCCGCAGATGGAGCGATGTGAAGAGAAAATGCCCTCTCTGCAACGCCGAC
TTTGATTCATGGTTCTCCAGAATCAGCTTCTCGTCCCGGACCTTCCATAAAGAGCAATTA
TCAGCTCGTAACGAGACTAAGAAGTTACACTCAGGTTTTGTCCCCTCTAGGCTGAGAGAC
CGATTGGCGGACCGAAGAGCGATTACGAGAAGGAGAGAAGAGTTGAGTACTTTTGGCTCC
AGAACGAGGCCGTTCCCAAAGCGGCGATCCTTTGATCGCAATGGAGCTTTAAATCCAGAT
GATATTACTAGGAGAATCATTCTCTGGCGTTCCAGCATTTATGAAGAGAGATTGCAGGCT
GTTCCTTTTTCATCTAAAAATTGCCTTATACAGCACATGGATAATAGGAGTACCAAAGAG
AAGATGTTACAGAGAATAGAACCATGGATAAGAAGGGAGCTGCAGGCTATACTGGGGGAT
CCAGATCCATCCATTATTGTCCATGTTGCTACCTCTCTTTTTATCACTGAAAATACACAT
TCAATACAGCGGTGCGCCAGAAATGATTTTCTTGCTCCATTGCGGCCCTTCTTGCATGAA
CATGCAGAAATTTTTTGGCATGAACTAAGGTGCTTTGCTGAGAGTCCTTTGTCTATGCAG
ACATATGATACTGTGGTGGAGTACTACTCCTTGGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053616
PEP Infomation

pacid=37452736 transcript=PGSC0003DMT400079098 locus=PGSC0003DMG400030783 ID=PGSC0003DMT400079098.v4.03 annot-version=v4.03
Sequence

MDSRFKVITTAVARKSCPICLCRLHHRSAAVVIPCMHAYCIVCIRRWSDVKRKCPLCNAD
FDSWFSRISFSSRTFHKEQLSARNETKKLHSGFVPSRLRDRLADRRAITRRREELSTFGS
RTRPFPKRRSFDRNGALNPDDITRRIILWRSSIYEERLQAVPFSSKNCLIQHMDNRSTKE
KMLQRIEPWIRRELQAILGDPDPSIIVHVATSLFITENTHSIQRCARNDFLAPLRPFLHE
HAEIFWHELRCFAESPLSMQTYDTVVEYYSLD*

Transcript Sequence

Transcript ID

PGSC0003DMT400079098
Transcript Infomation

pacid=37452736 locus=PGSC0003DMG400030783 ID=PGSC0003DMT400079098.v4.03 annot-version=v4.03
Sequence

ATGGACTCTAGATTTAAGGTAATTACCACTGCCGTTGCCCGGAAATCATGTCCGATATGC
CTCTGCCGGCTGCACCATCGGAGCGCGGCGGTTGTTATCCCATGTATGCACGCCTATTGC
ATCGTTTGCATCCGCAGATGGAGCGATGTGAAGAGAAAATGCCCTCTCTGCAACGCCGAC
TTTGATTCATGGTTCTCCAGAATCAGCTTCTCGTCCCGGACCTTCCATAAAGAGCAATTA
TCAGCTCGTAACGAGACTAAGAAGTTACACTCAGGTTTTGTCCCCTCTAGGCTGAGAGAC
CGATTGGCGGACCGAAGAGCGATTACGAGAAGGAGAGAAGAGTTGAGTACTTTTGGCTCC
AGAACGAGGCCGTTCCCAAAGCGGCGATCCTTTGATCGCAATGGAGCTTTAAATCCAGAT
GATATTACTAGGAGAATCATTCTCTGGCGTTCCAGCATTTATGAAGAGAGATTGCAGGCT
GTTCCTTTTTCATCTAAAAATTGCCTTATACAGCACATGGATAATAGGAGTACCAAAGAG
AAGATGTTACAGAGAATAGAACCATGGATAAGAAGGGAGCTGCAGGCTATACTGGGGGAT
CCAGATCCATCCATTATTGTCCATGTTGCTACCTCTCTTTTTATCACTGAAAATACACAT
TCAATACAGCGGTGCGCCAGAAATGATTTTCTTGCTCCATTGCGGCCCTTCTTGCATGAA
CATGCAGAAATTTTTTGGCATGAACTAAGGTGCTTTGCTGAGAGTCCTTTGTCTATGCAG
ACATATGATACTGTGGTGGAGTACTACTCCTTGGACTAA