Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078946
CDS Infomation

pacid=37432089 polypeptide=PGSC0003DMP400053506 locus=PGSC0003DMG400030720 ID=PGSC0003DMT400078946.v4.03 annot-version=v4.03
Sequence

ATGGAGTTTCATCACTTCGTTTCATTTTCGCTATTCATCTTCTTCCTCTTTATGATAATT
CAAAATTGGAGCAGAAACTCGAAAACCCTCAAGAAAAAGCTGCCACCGGGCCCATGGAGG
TTACCTATTATTGGAAGTGTACACCACTTGACACGTGGAACACCTCATCGAGTTCTCGGA
AACTTGTCGCAAAAATATGGACCCATTATGTACTTACAACTCGGGGAAGTTCCCACAGTA
GTTGTGTCCTCCCCACATATGGCCAAACAAATTCTAAAAACTCATGACCTCGCCTTTGCA
TCTAGGTCAGTAACCATGTTGGGAAAAATTCTTTGTTATAATAGTACGGATATTGCCTTT
TCCCCATATGGTGATTACTGGAGACATATGCGTAAATTGAGTGTGTTGGAGCTACTTAGT
GCCAAGATGGTTAAGTCTTTTAGCTCAATTCGACACGATGAGCTCTCAAATCTCCTATCA
TCTATCGACTCAATGGTAGGTTCGCCAATCAACTTATCAGAAAAACTTTTTTGGTTTATG
AATGCTTCGACATGTAGGTCAACATTTGGGAAAACATGTAAAAATCAAAATGAGTTGGTA
ACGTTGATTCAACGAGCAATGTCATTATCTAGTGGATTCGAGCTAGCTGATTTGTTCCCT
TCGAAAACATTTCTACATGGGATTAGTGGGATGGAATCTAAACTTATGAAAGCTCGTAAT
AAAGTAGACATACTCTTGGACAACATTATCAATGTGCATAGAGAGAATCACACAAATGGA
AAAAATTATAATGGTGAGTCTGGAACTGAAGATCTGATCGATGTTTTTTTAAGAGTCATG
GAGAGCGGCGAATTTCAATTCCCTCTAACAAATGACAATATCAAAGCAGTTATTCTTGAC
ATGTTCGTAGCAGGGTCAGACACGTCATCTGCAACCGTTATTTGGGCATTATCAGAAATG
ATGAAGAGTCCAAGTGTCATGGCGAAAGCACAAGCCGAAGTGAGAGAAGTCTTTAAAGGA
AAGGAAACATGTAATGACGATACTGACCTTGAAAAACTTAATTACCTAAAGTTAGTGATC
AAAGAGACACTCAGGTTACACCCTCCAACACCCTTGTTGGTCCCTCGAGAATGTAGGGAG
GAAACAAAGATAGATGGGTTCACTATACCGTTGAAAAGTAAAGTATTGGTTAATGTATGG
GCAATAGGAAGGGATCCCAAGAGTTGGGAAAATCCTGAATGTTTCATACCAGAAAGATTC
GAGAATAGTTCTATTGAATTTACTGGAAACTGCTTTCAACTTCTTCCGTTTGGAGCAGGA
AGACGAATGTGTCCAGGAATACATTTTGGTATAGCTCTTGTTACTCTACCATTAGCCCAT
TTGCTTTACAAGTTTGATTGGAAGCTTCCAGAAGGAATTCATGTAAGGGATTTGGATATG
ACTGAGTCAAATGGAATAACTGCTAGAAGAGAGAATGATCTCTACTTGATCGGCACACCT
AGCTCGTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053506
PEP Infomation

pacid=37432089 transcript=PGSC0003DMT400078946 locus=PGSC0003DMG400030720 ID=PGSC0003DMT400078946.v4.03 annot-version=v4.03
Sequence

MEFHHFVSFSLFIFFLFMIIQNWSRNSKTLKKKLPPGPWRLPIIGSVHHLTRGTPHRVLG
NLSQKYGPIMYLQLGEVPTVVVSSPHMAKQILKTHDLAFASRSVTMLGKILCYNSTDIAF
SPYGDYWRHMRKLSVLELLSAKMVKSFSSIRHDELSNLLSSIDSMVGSPINLSEKLFWFM
NASTCRSTFGKTCKNQNELVTLIQRAMSLSSGFELADLFPSKTFLHGISGMESKLMKARN
KVDILLDNIINVHRENHTNGKNYNGESGTEDLIDVFLRVMESGEFQFPLTNDNIKAVILD
MFVAGSDTSSATVIWALSEMMKSPSVMAKAQAEVREVFKGKETCNDDTDLEKLNYLKLVI
KETLRLHPPTPLLVPRECREETKIDGFTIPLKSKVLVNVWAIGRDPKSWENPECFIPERF
ENSSIEFTGNCFQLLPFGAGRRMCPGIHFGIALVTLPLAHLLYKFDWKLPEGIHVRDLDM
TESNGITARRENDLYLIGTPSSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400078946
Transcript Infomation

pacid=37432089 locus=PGSC0003DMG400030720 ID=PGSC0003DMT400078946.v4.03 annot-version=v4.03
Sequence

ATGGAGTTTCATCACTTCGTTTCATTTTCGCTATTCATCTTCTTCCTCTTTATGATAATT
CAAAATTGGAGCAGAAACTCGAAAACCCTCAAGAAAAAGCTGCCACCGGGCCCATGGAGG
TTACCTATTATTGGAAGTGTACACCACTTGACACGTGGAACACCTCATCGAGTTCTCGGA
AACTTGTCGCAAAAATATGGACCCATTATGTACTTACAACTCGGGGAAGTTCCCACAGTA
GTTGTGTCCTCCCCACATATGGCCAAACAAATTCTAAAAACTCATGACCTCGCCTTTGCA
TCTAGGTCAGTAACCATGTTGGGAAAAATTCTTTGTTATAATAGTACGGATATTGCCTTT
TCCCCATATGGTGATTACTGGAGACATATGCGTAAATTGAGTGTGTTGGAGCTACTTAGT
GCCAAGATGGTTAAGTCTTTTAGCTCAATTCGACACGATGAGCTCTCAAATCTCCTATCA
TCTATCGACTCAATGGTAGGTTCGCCAATCAACTTATCAGAAAAACTTTTTTGGTTTATG
AATGCTTCGACATGTAGGTCAACATTTGGGAAAACATGTAAAAATCAAAATGAGTTGGTA
ACGTTGATTCAACGAGCAATGTCATTATCTAGTGGATTCGAGCTAGCTGATTTGTTCCCT
TCGAAAACATTTCTACATGGGATTAGTGGGATGGAATCTAAACTTATGAAAGCTCGTAAT
AAAGTAGACATACTCTTGGACAACATTATCAATGTGCATAGAGAGAATCACACAAATGGA
AAAAATTATAATGGTGAGTCTGGAACTGAAGATCTGATCGATGTTTTTTTAAGAGTCATG
GAGAGCGGCGAATTTCAATTCCCTCTAACAAATGACAATATCAAAGCAGTTATTCTTGAC
ATGTTCGTAGCAGGGTCAGACACGTCATCTGCAACCGTTATTTGGGCATTATCAGAAATG
ATGAAGAGTCCAAGTGTCATGGCGAAAGCACAAGCCGAAGTGAGAGAAGTCTTTAAAGGA
AAGGAAACATGTAATGACGATACTGACCTTGAAAAACTTAATTACCTAAAGTTAGTGATC
AAAGAGACACTCAGGTTACACCCTCCAACACCCTTGTTGGTCCCTCGAGAATGTAGGGAG
GAAACAAAGATAGATGGGTTCACTATACCGTTGAAAAGTAAAGTATTGGTTAATGTATGG
GCAATAGGAAGGGATCCCAAGAGTTGGGAAAATCCTGAATGTTTCATACCAGAAAGATTC
GAGAATAGTTCTATTGAATTTACTGGAAACTGCTTTCAACTTCTTCCGTTTGGAGCAGGA
AGACGAATGTGTCCAGGAATACATTTTGGTATAGCTCTTGTTACTCTACCATTAGCCCAT
TTGCTTTACAAGTTTGATTGGAAGCTTCCAGAAGGAATTCATGTAAGGGATTTGGATATG
ACTGAGTCAAATGGAATAACTGCTAGAAGAGAGAATGATCTCTACTTGATCGGCACACCT
AGCTCGTTTTAG