Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078935
CDS Infomation

pacid=37433270 polypeptide=PGSC0003DMP400053498 locus=PGSC0003DMG400030715 ID=PGSC0003DMT400078935.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTTATTTTTGCAAAAGGGAGTGTTGGTGTGGCTTTTTTTGTTTAGTTTGAGA
TTTATTTGTGGAACAACAGCTCAAGGTACTGTGTTTATAGATGGGAAAATTGCTATTGGA
AGAATAGATAAGCATTTTATTTGTGCTACTTTGGATTGGTGGCCACCTGAGAAGTGTGAT
TATGGAACTTGTGCTTGGGACCATTCTTCTTTCTTGAATCTGGATCTTAACAACATTATT
TTTCTCAATGCAATAAAAGCGTTCTCACCATTAAAGATTCGTTTGGGCGGAACTTTGCAA
GACAAAGTCATATACCAAACTGAAGATCATAAACAGCCCTGTGTCTCATTTGTTAGAAAC
ACAACAGAGATGTTTGGTTTTACTCCAGGGTGCCTTCCCTTGTCGAGATGGGATGAACTC
AATGCATTCTTTAATAAATCTGGGGCTAGTATAATTTTTGGATTAAATGCTCTTTATGGA
AGATCGGTACACCCTGACGGTTTATCTGTCGGAGCTTGGGATCCAAGCAATGCTGAATCG
CTTATACGTTATACTGTCAAAAAGGGATATGATATCCATGGTTGGGAACTCGGGAACGAA
TTGAGTGGTAGCGGAGTTGGAACCAGAGTTGCAGCAGATCAATATGCATCTGATACTATT
GCCTTGTACAAAACAGTGCAAGATGCTTACGAGAATTCTGAAACCAAACCGTTGGTCCTG
GCACCGGGAGGTTTCTTTGATGAAGGCTGGTTCAAGGAAGTAGTAAATAAAGCCGGGGCA
TCATTTGATGTGGCAACTCACCACATATATAATCTTGGTCCAGGAAGAGATGAACACCTT
CTTGAAAAAATCCTCGATCCATCTTATCTCGACGGTGAAGCTGATACATTTAATAAACTT
CAGAATATCCTCAAGGCATCTGGTAGTTCAGTGGTTGCGTGGGTTGGTGAGGCTGGAGGG
GCTTATAACAGTGGCCGCAACCATGTCACAAATGCCTTTGCTTTTAGCTTCTGGTATTTG
GACCAGCTTGGTATGTCAGCTGCCTATGATACCAAGACATACTGTCGACAGACATTGATT
GGTGGAAACTACGGTTTACTCAATACGACTACCTTTGTACCAAATCCAGATTACTACAGT
GCTCTTCTTTGGCACCGATTGATGGGAAGGAACGTTTTGGCAACGAGTTTCTCAGGGACA
AAGAAAATACGTGCATACGCTCATTGTGCAAAGCAATCTCAAGGTATCACATTACTGTTG
ATCAACCTTGATGGCAACACCACCATTCATGCCAGAGTTGATTTTAACGGTACTATGTTA
CATCGACGAAAACACAGACATCATCATAACCACAGAAAGAGTTCAATCAAACTGCCTAGA
AGTAGCAAAATAGCATCAAACACAAGAGAAGAGTACCATTTAACAGCAAAAGATGGAAAT
TTACAAAGCCAGACAATGCTGCTAAATGGAAATGCACTGATTGTAGATTCATCTGGAAAT
ATACCTACATTTGAGCCTATATATGTCAATTCAACAGAGGCGATAACCGTCGCGCCATTC
TCTATTGTATTTGTACACATACCATATGTACTTTTGCCTGCTTGTAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053498
PEP Infomation

pacid=37433270 transcript=PGSC0003DMT400078935 locus=PGSC0003DMG400030715 ID=PGSC0003DMT400078935.v4.03 annot-version=v4.03
Sequence

MDSLFLQKGVLVWLFLFSLRFICGTTAQGTVFIDGKIAIGRIDKHFICATLDWWPPEKCD
YGTCAWDHSSFLNLDLNNIIFLNAIKAFSPLKIRLGGTLQDKVIYQTEDHKQPCVSFVRN
TTEMFGFTPGCLPLSRWDELNAFFNKSGASIIFGLNALYGRSVHPDGLSVGAWDPSNAES
LIRYTVKKGYDIHGWELGNELSGSGVGTRVAADQYASDTIALYKTVQDAYENSETKPLVL
APGGFFDEGWFKEVVNKAGASFDVATHHIYNLGPGRDEHLLEKILDPSYLDGEADTFNKL
QNILKASGSSVVAWVGEAGGAYNSGRNHVTNAFAFSFWYLDQLGMSAAYDTKTYCRQTLI
GGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLATSFSGTKKIRAYAHCAKQSQGITLLL
INLDGNTTIHARVDFNGTMLHRRKHRHHHNHRKSSIKLPRSSKIASNTREEYHLTAKDGN
LQSQTMLLNGNALIVDSSGNIPTFEPIYVNSTEAITVAPFSIVFVHIPYVLLPACS*

Transcript Sequence

Transcript ID

PGSC0003DMT400078935
Transcript Infomation

pacid=37433270 locus=PGSC0003DMG400030715 ID=PGSC0003DMT400078935.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTTATTTTTGCAAAAGGGAGTGTTGGTGTGGCTTTTTTTGTTTAGTTTGAGA
TTTATTTGTGGAACAACAGCTCAAGGTACTGTGTTTATAGATGGGAAAATTGCTATTGGA
AGAATAGATAAGCATTTTATTTGTGCTACTTTGGATTGGTGGCCACCTGAGAAGTGTGAT
TATGGAACTTGTGCTTGGGACCATTCTTCTTTCTTGAATCTGGATCTTAACAACATTATT
TTTCTCAATGCAATAAAAGCGTTCTCACCATTAAAGATTCGTTTGGGCGGAACTTTGCAA
GACAAAGTCATATACCAAACTGAAGATCATAAACAGCCCTGTGTCTCATTTGTTAGAAAC
ACAACAGAGATGTTTGGTTTTACTCCAGGGTGCCTTCCCTTGTCGAGATGGGATGAACTC
AATGCATTCTTTAATAAATCTGGGGCTAGTATAATTTTTGGATTAAATGCTCTTTATGGA
AGATCGGTACACCCTGACGGTTTATCTGTCGGAGCTTGGGATCCAAGCAATGCTGAATCG
CTTATACGTTATACTGTCAAAAAGGGATATGATATCCATGGTTGGGAACTCGGGAACGAA
TTGAGTGGTAGCGGAGTTGGAACCAGAGTTGCAGCAGATCAATATGCATCTGATACTATT
GCCTTGTACAAAACAGTGCAAGATGCTTACGAGAATTCTGAAACCAAACCGTTGGTCCTG
GCACCGGGAGGTTTCTTTGATGAAGGCTGGTTCAAGGAAGTAGTAAATAAAGCCGGGGCA
TCATTTGATGTGGCAACTCACCACATATATAATCTTGGTCCAGGAAGAGATGAACACCTT
CTTGAAAAAATCCTCGATCCATCTTATCTCGACGGTGAAGCTGATACATTTAATAAACTT
CAGAATATCCTCAAGGCATCTGGTAGTTCAGTGGTTGCGTGGGTTGGTGAGGCTGGAGGG
GCTTATAACAGTGGCCGCAACCATGTCACAAATGCCTTTGCTTTTAGCTTCTGGTATTTG
GACCAGCTTGGTATGTCAGCTGCCTATGATACCAAGACATACTGTCGACAGACATTGATT
GGTGGAAACTACGGTTTACTCAATACGACTACCTTTGTACCAAATCCAGATTACTACAGT
GCTCTTCTTTGGCACCGATTGATGGGAAGGAACGTTTTGGCAACGAGTTTCTCAGGGACA
AAGAAAATACGTGCATACGCTCATTGTGCAAAGCAATCTCAAGGTATCACATTACTGTTG
ATCAACCTTGATGGCAACACCACCATTCATGCCAGAGTTGATTTTAACGGTACTATGTTA
CATCGACGAAAACACAGACATCATCATAACCACAGAAAGAGTTCAATCAAACTGCCTAGA
AGTAGCAAAATAGCATCAAACACAAGAGAAGAGTACCATTTAACAGCAAAAGATGGAAAT
TTACAAAGCCAGACAATGCTGCTAAATGGAAATGCACTGATTGTAGATTCATCTGGAAAT
ATACCTACATTTGAGCCTATATATGTCAATTCAACAGAGGCGATAACCGTCGCGCCATTC
TCTATTGTATTTGTACACATACCATATGTACTTTTGCCTGCTTGTAGCTGA