Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078924
CDS Infomation

pacid=37434524 polypeptide=PGSC0003DMP400053491 locus=PGSC0003DMG400030710 ID=PGSC0003DMT400078924.v4.03 annot-version=v4.03
Sequence

ATGATGAGCTTCAAGGACTGGGTCCTGTCACAGTTGATAACCAAGTCAGTAGCCTCGTCA
AGACCACTTTTAGCATCAGATAACTTTTTATCAGAGGAGCATCCTGATCAAGGGTTTGAC
CACCCAGCTCACACTGCTGATTTGGTTACAACAACTAGAATAGACAATACAATACAATCT
TCCAATGATAATCAAGAGCATACAGAGAATACAAATAATTTTCATTCACAACAACGGATG
GGCGAAGATTCTTTTCAGTCGGATTTTAGGGTTGATGAGAAACCTAGTCCAGTGGTAAAG
ATTGAAGCCCTTCAGATTACATTCTTGCGCCTTCTTAAACGTTTTGGCCTGTCCGAGGAC
AACCTTCTGGTATCAAAGGTCTTATACCGGATCCAGCTGGCATCACTGATACGGGCTAGA
GAATCGGATTTAAAAAGGGCAAATCTTAAAATTGAGAGAGCCCGTGTAATAGCAGCAGAA
CAAGAAGCTGCTGGCCGACCACAACTGGATTTCTCATTTAAGATCCTTGTACTGGGTAGA
ACTGGAGTTGGCAAAAGTTCAACCATAAATTCCATTTTTGACCAATCAAGAGCAGCAACC
AACGCGTTCAAGCCTGCTACTGACCATATTCAAGAGATTGTGGGAACGGTAAATGGCATC
AGAGTATCGTTTATTGACACTCCTGGTTTATTGCCTCCCTCACCCAGTAATATCCGAAAA
AACAAGAAGATATTGCATTCTGTGAAACGATATTTAAGGAAACAAACGCCTGATATGGTA
CTGTATTTTGAGCGCTTGGATTTGATCAACACGGGCTACAGTGATTTCCCCTTGTTGAAG
CTTATAACGGAAGTCTTTGGTCCTGCAATTTGGTTTAATACTATCCTTGTCATGACTCAT
TCTTCCTTCAATCTTCGCGAAGGAACAAACGGATATCCTGTTAACTATGAATCTTTTGTC
ACCACCTGCACAGATTTGGTCCAACATTATATTCACCAGGCAGTCTCTGACACTAAGCTT
GAAAATCCTGTAATTTTGGTGGAGAATGATCCCAATTGTAAGACCAATAATGCTGGAGAG
AAGATTCTCCCTAATGGGCAGGTGTGGAAGTCTCAGTTATTATTGTTGTGCATATGCACC
AAAGTTCTAAGTGATGTTAATACCCTATTGGACTTTGAAGACAGCCTAAAGGTGGGGCCA
TCAAATGTAGGACGATTGCCTTCTCTTCCGCATCTTCTCTCATCCTTTCTAAAGCATCGT
GCCCAGATAAGACACAGCGGAGCTGAGAATGAAATTGATGAGGTTTCTCTTTTAGTCTCA
GATGATGAAGACGACGAATATGATCAGTTACCTCCTATTCGGATACTGACCAAGTCTCAG
TTTGGAAGGTTGAGTGGTTCCCAAAAGAAGGATTATCTTGACGAACTAGACTACCGAGAA
ACCCTCTATTTGAAAAAACAACTGATAGAAGAAGCTCGTCGACAAAGAGAAAAGAGAGTT
TCTTCAAGTGAGGGTAAAGCAGCCCCGGATGATGAGTCTGATAACCAGCAGGAGGGCCCT
CCAGAGCCAGTTCTCTTGCCAGATATGGCTATTCCTCCAAGCTTTGATTCAGATTGCCCT
ATCCACAGATACAGGTGTCTCATCACCAGTGAACAGTGGCTTGCAAGACCAGTCCTTGAT
CCCAATGGATGGGACCATGATGTGAGCTTTGATGGAATTAACCTCGAGAGCAGTGCAGAA
ATAAGAAAAAACATATTTGCCTCGGTTAATGGACAAATGAGCAAGGACAAACAAGACTTC
AGTATTCAATCTGAGTTTGCTGCAGCTTTCACCAATCCAGGTGGGCCCACTTATGCGGTT
GGTCTTGATGTTCAATCTGCCAATAAAGAACTGATCTGCACTATCCACAGTAATGCAAAG
GTAAGAAATTTAAGAACTAATGTCACTGAATGCGGTATTTCTGTAATACCATTCGGGGAT
AAGTATTTTCTTGGTGCCAAATGTGAAGACAGTTTTACAATTGGAAAGAGACTGAAGTTT
AATGTGAATGCTGGTCGGATGGGGGGTGCTGGGCAAGCAGCCTATGGCGGGAGCTTTGTA
GCTACTTTAAGAGGAAGGGATTATCCAGTGAGAAACGAAAGTCTGAGTCTCTCGATGACA
GTTCTCTCTCTCAACAAAGAAATGGTGTTGAGCGGAAACTTACAAACTGACTTCAGAGTG
AGCCGAGGTACAAACATGTCAGTGAGTGCAAACCTCAATAACCGAAAGATGGGCCAGGTT
TCCATCAAGACAAGCAGCTCTGAGCGCATGGAAATTGCTTTTATCGCACTTTTCTCCATT
GCAAGAGCCCTGCTGCGCAGAAAGAGAAATGACCAACTTATTGAAGACTCTCTGGAAGCG
AGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400053491
PEP Infomation

pacid=37434524 transcript=PGSC0003DMT400078924 locus=PGSC0003DMG400030710 ID=PGSC0003DMT400078924.v4.03 annot-version=v4.03
Sequence

MMSFKDWVLSQLITKSVASSRPLLASDNFLSEEHPDQGFDHPAHTADLVTTTRIDNTIQS
SNDNQEHTENTNNFHSQQRMGEDSFQSDFRVDEKPSPVVKIEALQITFLRLLKRFGLSED
NLLVSKVLYRIQLASLIRARESDLKRANLKIERARVIAAEQEAAGRPQLDFSFKILVLGR
TGVGKSSTINSIFDQSRAATNAFKPATDHIQEIVGTVNGIRVSFIDTPGLLPPSPSNIRK
NKKILHSVKRYLRKQTPDMVLYFERLDLINTGYSDFPLLKLITEVFGPAIWFNTILVMTH
SSFNLREGTNGYPVNYESFVTTCTDLVQHYIHQAVSDTKLENPVILVENDPNCKTNNAGE
KILPNGQVWKSQLLLLCICTKVLSDVNTLLDFEDSLKVGPSNVGRLPSLPHLLSSFLKHR
AQIRHSGAENEIDEVSLLVSDDEDDEYDQLPPIRILTKSQFGRLSGSQKKDYLDELDYRE
TLYLKKQLIEEARRQREKRVSSSEGKAAPDDESDNQQEGPPEPVLLPDMAIPPSFDSDCP
IHRYRCLITSEQWLARPVLDPNGWDHDVSFDGINLESSAEIRKNIFASVNGQMSKDKQDF
SIQSEFAAAFTNPGGPTYAVGLDVQSANKELICTIHSNAKVRNLRTNVTECGISVIPFGD
KYFLGAKCEDSFTIGKRLKFNVNAGRMGGAGQAAYGGSFVATLRGRDYPVRNESLSLSMT
VLSLNKEMVLSGNLQTDFRVSRGTNMSVSANLNNRKMGQVSIKTSSSERMEIAFIALFSI
ARALLRRKRNDQLIEDSLEAR*

Transcript Sequence

Transcript ID

PGSC0003DMT400078924
Transcript Infomation

pacid=37434524 locus=PGSC0003DMG400030710 ID=PGSC0003DMT400078924.v4.03 annot-version=v4.03
Sequence

ATGATGAGCTTCAAGGACTGGGTCCTGTCACAGTTGATAACCAAGTCAGTAGCCTCGTCA
AGACCACTTTTAGCATCAGATAACTTTTTATCAGAGGAGCATCCTGATCAAGGGTTTGAC
CACCCAGCTCACACTGCTGATTTGGTTACAACAACTAGAATAGACAATACAATACAATCT
TCCAATGATAATCAAGAGCATACAGAGAATACAAATAATTTTCATTCACAACAACGGATG
GGCGAAGATTCTTTTCAGTCGGATTTTAGGGTTGATGAGAAACCTAGTCCAGTGGTAAAG
ATTGAAGCCCTTCAGATTACATTCTTGCGCCTTCTTAAACGTTTTGGCCTGTCCGAGGAC
AACCTTCTGGTATCAAAGGTCTTATACCGGATCCAGCTGGCATCACTGATACGGGCTAGA
GAATCGGATTTAAAAAGGGCAAATCTTAAAATTGAGAGAGCCCGTGTAATAGCAGCAGAA
CAAGAAGCTGCTGGCCGACCACAACTGGATTTCTCATTTAAGATCCTTGTACTGGGTAGA
ACTGGAGTTGGCAAAAGTTCAACCATAAATTCCATTTTTGACCAATCAAGAGCAGCAACC
AACGCGTTCAAGCCTGCTACTGACCATATTCAAGAGATTGTGGGAACGGTAAATGGCATC
AGAGTATCGTTTATTGACACTCCTGGTTTATTGCCTCCCTCACCCAGTAATATCCGAAAA
AACAAGAAGATATTGCATTCTGTGAAACGATATTTAAGGAAACAAACGCCTGATATGGTA
CTGTATTTTGAGCGCTTGGATTTGATCAACACGGGCTACAGTGATTTCCCCTTGTTGAAG
CTTATAACGGAAGTCTTTGGTCCTGCAATTTGGTTTAATACTATCCTTGTCATGACTCAT
TCTTCCTTCAATCTTCGCGAAGGAACAAACGGATATCCTGTTAACTATGAATCTTTTGTC
ACCACCTGCACAGATTTGGTCCAACATTATATTCACCAGGCAGTCTCTGACACTAAGCTT
GAAAATCCTGTAATTTTGGTGGAGAATGATCCCAATTGTAAGACCAATAATGCTGGAGAG
AAGATTCTCCCTAATGGGCAGGTGTGGAAGTCTCAGTTATTATTGTTGTGCATATGCACC
AAAGTTCTAAGTGATGTTAATACCCTATTGGACTTTGAAGACAGCCTAAAGGTGGGGCCA
TCAAATGTAGGACGATTGCCTTCTCTTCCGCATCTTCTCTCATCCTTTCTAAAGCATCGT
GCCCAGATAAGACACAGCGGAGCTGAGAATGAAATTGATGAGGTTTCTCTTTTAGTCTCA
GATGATGAAGACGACGAATATGATCAGTTACCTCCTATTCGGATACTGACCAAGTCTCAG
TTTGGAAGGTTGAGTGGTTCCCAAAAGAAGGATTATCTTGACGAACTAGACTACCGAGAA
ACCCTCTATTTGAAAAAACAACTGATAGAAGAAGCTCGTCGACAAAGAGAAAAGAGAGTT
TCTTCAAGTGAGGGTAAAGCAGCCCCGGATGATGAGTCTGATAACCAGCAGGAGGGCCCT
CCAGAGCCAGTTCTCTTGCCAGATATGGCTATTCCTCCAAGCTTTGATTCAGATTGCCCT
ATCCACAGATACAGGTGTCTCATCACCAGTGAACAGTGGCTTGCAAGACCAGTCCTTGAT
CCCAATGGATGGGACCATGATGTGAGCTTTGATGGAATTAACCTCGAGAGCAGTGCAGAA
ATAAGAAAAAACATATTTGCCTCGGTTAATGGACAAATGAGCAAGGACAAACAAGACTTC
AGTATTCAATCTGAGTTTGCTGCAGCTTTCACCAATCCAGGTGGGCCCACTTATGCGGTT
GGTCTTGATGTTCAATCTGCCAATAAAGAACTGATCTGCACTATCCACAGTAATGCAAAG
GTAAGAAATTTAAGAACTAATGTCACTGAATGCGGTATTTCTGTAATACCATTCGGGGAT
AAGTATTTTCTTGGTGCCAAATGTGAAGACAGTTTTACAATTGGAAAGAGACTGAAGTTT
AATGTGAATGCTGGTCGGATGGGGGGTGCTGGGCAAGCAGCCTATGGCGGGAGCTTTGTA
GCTACTTTAAGAGGAAGGGATTATCCAGTGAGAAACGAAAGTCTGAGTCTCTCGATGACA
GTTCTCTCTCTCAACAAAGAAATGGTGTTGAGCGGAAACTTACAAACTGACTTCAGAGTG
AGCCGAGGTACAAACATGTCAGTGAGTGCAAACCTCAATAACCGAAAGATGGGCCAGGTT
TCCATCAAGACAAGCAGCTCTGAGCGCATGGAAATTGCTTTTATCGCACTTTTCTCCATT
GCAAGAGCCCTGCTGCGCAGAAAGAGAAATGACCAACTTATTGAAGACTCTCTGGAAGCG
AGATGA