Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078874
CDS Infomation

pacid=37431848 polypeptide=PGSC0003DMP400053461 locus=PGSC0003DMG400030695 ID=PGSC0003DMT400078874.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTGGGAGTAGTCGTTTGGGGTCACGCTCAAGTCGTTCAAATCGAACAAAAAGA
ACATTTGCATCCATTTTTATATGTGGTGCTTCTCCATCTTCTCGTCGTTCAGCTGTTGAG
ATGGAAGAAGATCCAGCTGAAATGCTGGTGGATTCTGCAGAACATGCTGACACTGGAAAG
CTCCAAAACTCTGAGAAGGACCCTTCACCTGATTTTATTCCCTCCCAAGCTGAACGTGGA
GCTTCATCTGCAAGCAATCTGGTAAATAGTGAAAAATCTCCATCTGTAGACCCTTCAAGC
AATGTTCAGGGAGGTAATCGAAGAGAAAACTCAACCAAAGACATGGAATTAGTCACTCAA
TATAATCCTGGACGTAAACGTGGTGAAACTGCTAGTACATCTCGGGATGACCGATCATTT
CGCTATCCACTTTCTTTGAACAGAAGGGCAGACGATGATGTTGTGAATAATGTCGCCACT
ACAGTGAATGTAGATGTCTCTCAAGTTTTTGCCGGTTACTCTCATTCTAGTAGTCCATTG
TCTCATGGAAATGGAGAGTCTTCATCAAGTGAAGATTTTGTTGCAAACCACACAAATGAA
ATTCTTATCTTCAATAATTCTGATTCTGTTTCAGTTCTTTCGGATTCTTCAGTTACGCCA
CATTTGGTGGGAGATGATATGCGTCAGGATACACCACCTTCAGGTTTCGAATTTCTGGTG
TCAGACAGGGAAGAGGGTGTAAGAGATGGAAGTGCACTTCATGTTGACATGGCGAATGCC
TCTCCCACTTTTTTCTCTAATATTCCTGCTGAAATTAGTAGTCGTGAAGCAAGACGGAAT
AGTAGAAGACTTTTTTGGGATTCTTTTTCAAGGAGAAGTCCTAGGAGGCGTGCTGATCCT
CGTAACTTCCGTTTTCCAAATGATAATTCAGACGATATTGCATCTCGTGACAGGTTACTG
CTGGACTTTAGTGATAATTCCCTTCATGAGGGGTCTGGAGGAAATTTTCCATCAAATGGA
AGTCGGAATGAACGGCGACGGCATTCCAGATCTGAGATGTGGGAAAGACTTCCTGCTGGT
CTTATTGCTAGTGATCATCGAAGTGCCACTTGTCCAAGTGGGATTCACACAGATGGTCCA
TGTTCATGTGAGACAATTTTAATGAGTCGAGAATCTGGCAGTCGTGCAAGTATATCCCGA
ATAGTTATGCTTGCTGAGGCATTGTTTGAGGTACTGGATGAAATACATCGTCAACCTATG
TCGTTGTCCTTATCTGTGCTATCACTACCAGCTCCAGAGTCAGTTGTGGACTCATTCCCA
GTGAAGAGTTACTCAAAACCGGAGGAAGTAGATACTAGCAACAATGTTTTACAGTGTCAC
ATATGCTTGTCCGAGTACGAGGAAGGAGATAAAATACGAGTTCTACCTTGTCACCATGAG
TTTCATTTATTATGTGTGGATAAATGGCTCAAAGAGATACATGGTGTATGTCCACTTTGC
AGAGGAGATGTACGAAATGGTTTCGTTGACAGTTCAGTTTCTAACTCAGCAGCACTTCCT
CTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053461
PEP Infomation

pacid=37431848 transcript=PGSC0003DMT400078874 locus=PGSC0003DMG400030695 ID=PGSC0003DMT400078874.v4.03 annot-version=v4.03
Sequence

MGSGSSRLGSRSSRSNRTKRTFASIFICGASPSSRRSAVEMEEDPAEMLVDSAEHADTGK
LQNSEKDPSPDFIPSQAERGASSASNLVNSEKSPSVDPSSNVQGGNRRENSTKDMELVTQ
YNPGRKRGETASTSRDDRSFRYPLSLNRRADDDVVNNVATTVNVDVSQVFAGYSHSSSPL
SHGNGESSSSEDFVANHTNEILIFNNSDSVSVLSDSSVTPHLVGDDMRQDTPPSGFEFLV
SDREEGVRDGSALHVDMANASPTFFSNIPAEISSREARRNSRRLFWDSFSRRSPRRRADP
RNFRFPNDNSDDIASRDRLLLDFSDNSLHEGSGGNFPSNGSRNERRRHSRSEMWERLPAG
LIASDHRSATCPSGIHTDGPCSCETILMSRESGSRASISRIVMLAEALFEVLDEIHRQPM
SLSLSVLSLPAPESVVDSFPVKSYSKPEEVDTSNNVLQCHICLSEYEEGDKIRVLPCHHE
FHLLCVDKWLKEIHGVCPLCRGDVRNGFVDSSVSNSAALPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400078874
Transcript Infomation

pacid=37431848 locus=PGSC0003DMG400030695 ID=PGSC0003DMT400078874.v4.03 annot-version=v4.03
Sequence

ATGGGTTCTGGGAGTAGTCGTTTGGGGTCACGCTCAAGTCGTTCAAATCGAACAAAAAGA
ACATTTGCATCCATTTTTATATGTGGTGCTTCTCCATCTTCTCGTCGTTCAGCTGTTGAG
ATGGAAGAAGATCCAGCTGAAATGCTGGTGGATTCTGCAGAACATGCTGACACTGGAAAG
CTCCAAAACTCTGAGAAGGACCCTTCACCTGATTTTATTCCCTCCCAAGCTGAACGTGGA
GCTTCATCTGCAAGCAATCTGGTAAATAGTGAAAAATCTCCATCTGTAGACCCTTCAAGC
AATGTTCAGGGAGGTAATCGAAGAGAAAACTCAACCAAAGACATGGAATTAGTCACTCAA
TATAATCCTGGACGTAAACGTGGTGAAACTGCTAGTACATCTCGGGATGACCGATCATTT
CGCTATCCACTTTCTTTGAACAGAAGGGCAGACGATGATGTTGTGAATAATGTCGCCACT
ACAGTGAATGTAGATGTCTCTCAAGTTTTTGCCGGTTACTCTCATTCTAGTAGTCCATTG
TCTCATGGAAATGGAGAGTCTTCATCAAGTGAAGATTTTGTTGCAAACCACACAAATGAA
ATTCTTATCTTCAATAATTCTGATTCTGTTTCAGTTCTTTCGGATTCTTCAGTTACGCCA
CATTTGGTGGGAGATGATATGCGTCAGGATACACCACCTTCAGGTTTCGAATTTCTGGTG
TCAGACAGGGAAGAGGGTGTAAGAGATGGAAGTGCACTTCATGTTGACATGGCGAATGCC
TCTCCCACTTTTTTCTCTAATATTCCTGCTGAAATTAGTAGTCGTGAAGCAAGACGGAAT
AGTAGAAGACTTTTTTGGGATTCTTTTTCAAGGAGAAGTCCTAGGAGGCGTGCTGATCCT
CGTAACTTCCGTTTTCCAAATGATAATTCAGACGATATTGCATCTCGTGACAGGTTACTG
CTGGACTTTAGTGATAATTCCCTTCATGAGGGGTCTGGAGGAAATTTTCCATCAAATGGA
AGTCGGAATGAACGGCGACGGCATTCCAGATCTGAGATGTGGGAAAGACTTCCTGCTGGT
CTTATTGCTAGTGATCATCGAAGTGCCACTTGTCCAAGTGGGATTCACACAGATGGTCCA
TGTTCATGTGAGACAATTTTAATGAGTCGAGAATCTGGCAGTCGTGCAAGTATATCCCGA
ATAGTTATGCTTGCTGAGGCATTGTTTGAGGTACTGGATGAAATACATCGTCAACCTATG
TCGTTGTCCTTATCTGTGCTATCACTACCAGCTCCAGAGTCAGTTGTGGACTCATTCCCA
GTGAAGAGTTACTCAAAACCGGAGGAAGTAGATACTAGCAACAATGTTTTACAGTGTCAC
ATATGCTTGTCCGAGTACGAGGAAGGAGATAAAATACGAGTTCTACCTTGTCACCATGAG
TTTCATTTATTATGTGTGGATAAATGGCTCAAAGAGATACATGGTGTATGTCCACTTTGC
AGAGGAGATGTACGAAATGGTTTCGTTGACAGTTCAGTTTCTAACTCAGCAGCACTTCCT
CTTTGA