Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078845
CDS Infomation

pacid=37431067 polypeptide=PGSC0003DMP400053441 locus=PGSC0003DMG400030687 ID=PGSC0003DMT400078845.v4.03 annot-version=v4.03
Sequence

ATGGCATCGGAGATCGAGGTGGTGGAGGAGGTTGAATCAAGAAATGAAGATGAATCGTCT
ACTTCTACGGCGGTGGTTAGCGGTGGTGTAGGTGAGGAGGAGAGTTTGAGGGATGATGTG
TATACGGCAGCTGCGTATGGGGATATGGAGAAGCTTCAGAGATTGGTGGAAAGTGAGGGT
TGTTCTGTATCTGAGCCTGATGGTCTTGGTTACTATGCGCTTCAGTGGGCTGCTCTTAAT
AATCGCACTGCAGCTGCACAATATATTATTGAGCACGGAGGAGATGTAAATGCTGCAGAT
CATACAGGGCAAACAGCATTGCACTGGAGTGCTGTTCGAGGTGCAGTGCAGGTTGCTGAG
CTCTTACTACAAGAAGGTGGTCGTGTAAATGCAGCTGATATGTATGGCTATCAGCCAACA
CATGTTGCCGCACAGTATGGTCAGACAGCTTTCCTTTATTATGTTGTTACAAAGTGGAAT
GCAGATCCTGATGTACCTGACGGTGACGGGAGAAGCCCTTTACACTGGGCTGCATACAAG
GGTTTTGCTGACTGTATACGCCTTCTACTCTTTCTTGATGCATATCGTGGACGTCAGGAT
AAAGAGGGTTGTACTCCTCTTCACTGGGCTGCTATTAGGGGTCACCTAGAAGCATGTACG
GTGTTGGTGCAGGCAGGGAAGAAGGAAGACCTTATCGTGACAGATAACACTGGCCTTACA
CCTGCTCAGCTTGCTTCTGACAAGAGTCACAGACAAGTTGCTTTTTTCCTTGGAAATGCT
AGGCAGTTATATGACAAACGCTGTGACGGAAGTACCCGGCTTGGCAAACTTTCAAAGCTT
GGACTTGCTCCTGTTCTTTGTTGTACAATATTTCTTCTACTTACCACTTACATTCATGCG
GTAATTTTGGCTTCAACTTTGCCAAAATTAACTGCTGCTGGCGCACTATTTGCATGGTTG
GGAGTTTTCCTTGCTACAGCTGGACTAGTTACATTTTACCGGTGCAGCAGAAAAGATCCA
GGTTACATCCGGAGGAGTCAACATGATTCACAAAATATCAAAGATGATGAACCTTTGCTC
AAATTGGAAATGAATCATCCTGCTTTGCTTGCTGGGAATTGGTCTCAACTTTGCTCCACG
TGCAAGATTGTTCGTCCTCTTCGTGCAAAGCATTGTTCAACCTGTGATCGCTGTGTGGAA
CAATTTGATCATCATTGTCCATGGGTGTCTAATTGCATCGGCAAGAAAAACAAGTGGGAC
TTTTTCAACTTTCTTGTTCTCGAAGTATTGGCAATGGTCTTAACTGGTGCAGTTACTCTT
ACAAGAGTTTTGACTGACCCAGCAGCTCCATCATCGTTTGGGGGTTGGCTGAGTCATGCT
GGTACTCACCATATTGGTGCTTTAGCATTTTTATTTGCAGATTTCTTCCTCTTCGTTGGA
GTGGCAGTCTTAACTGGGGTACAAGCTTCTCAGATATCACACAACATTACAACAAATGAA
ATGGCCAATATGATGCGTTACAGTTACCTCAGAGGACCAGGTGGTCGATTCCGTAATCCA
TATGATCATGGGTGTAAGAAGAACTGTTCAGATTTCTTGATAAACGGTTACAACGAAGAC
GTCGAGTTCATTGAAGAATCGGTTGAGTCCGAAGGGATTGGAATGATGCAGATTCCTCAC
AGTTCAAGTATGCAAAATGGCACCGGCCATTCTCATCCGATCAATGGAAATGGCCATCAT
GTTATCAATATAAGCAACAATAACCAGAACTCACACCAGGCCCATGTTCATTCTGCCCAT
TGTAGTCATAATGTGAAGAGCAAAACTGATTCTGTACCTGTGGGTTTGGGTGTTGGCTTA
GGAAGAAATGCTGCGCGTACCGCGTTACCTTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400053441
PEP Infomation

pacid=37431067 transcript=PGSC0003DMT400078845 locus=PGSC0003DMG400030687 ID=PGSC0003DMT400078845.v4.03 annot-version=v4.03
Sequence

MASEIEVVEEVESRNEDESSTSTAVVSGGVGEEESLRDDVYTAAAYGDMEKLQRLVESEG
CSVSEPDGLGYYALQWAALNNRTAAAQYIIEHGGDVNAADHTGQTALHWSAVRGAVQVAE
LLLQEGGRVNAADMYGYQPTHVAAQYGQTAFLYYVVTKWNADPDVPDGDGRSPLHWAAYK
GFADCIRLLLFLDAYRGRQDKEGCTPLHWAAIRGHLEACTVLVQAGKKEDLIVTDNTGLT
PAQLASDKSHRQVAFFLGNARQLYDKRCDGSTRLGKLSKLGLAPVLCCTIFLLLTTYIHA
VILASTLPKLTAAGALFAWLGVFLATAGLVTFYRCSRKDPGYIRRSQHDSQNIKDDEPLL
KLEMNHPALLAGNWSQLCSTCKIVRPLRAKHCSTCDRCVEQFDHHCPWVSNCIGKKNKWD
FFNFLVLEVLAMVLTGAVTLTRVLTDPAAPSSFGGWLSHAGTHHIGALAFLFADFFLFVG
VAVLTGVQASQISHNITTNEMANMMRYSYLRGPGGRFRNPYDHGCKKNCSDFLINGYNED
VEFIEESVESEGIGMMQIPHSSSMQNGTGHSHPINGNGHHVINISNNNQNSHQAHVHSAH
CSHNVKSKTDSVPVGLGVGLGRNAARTALPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400078845
Transcript Infomation

pacid=37431067 locus=PGSC0003DMG400030687 ID=PGSC0003DMT400078845.v4.03 annot-version=v4.03
Sequence

ATGGCATCGGAGATCGAGGTGGTGGAGGAGGTTGAATCAAGAAATGAAGATGAATCGTCT
ACTTCTACGGCGGTGGTTAGCGGTGGTGTAGGTGAGGAGGAGAGTTTGAGGGATGATGTG
TATACGGCAGCTGCGTATGGGGATATGGAGAAGCTTCAGAGATTGGTGGAAAGTGAGGGT
TGTTCTGTATCTGAGCCTGATGGTCTTGGTTACTATGCGCTTCAGTGGGCTGCTCTTAAT
AATCGCACTGCAGCTGCACAATATATTATTGAGCACGGAGGAGATGTAAATGCTGCAGAT
CATACAGGGCAAACAGCATTGCACTGGAGTGCTGTTCGAGGTGCAGTGCAGGTTGCTGAG
CTCTTACTACAAGAAGGTGGTCGTGTAAATGCAGCTGATATGTATGGCTATCAGCCAACA
CATGTTGCCGCACAGTATGGTCAGACAGCTTTCCTTTATTATGTTGTTACAAAGTGGAAT
GCAGATCCTGATGTACCTGACGGTGACGGGAGAAGCCCTTTACACTGGGCTGCATACAAG
GGTTTTGCTGACTGTATACGCCTTCTACTCTTTCTTGATGCATATCGTGGACGTCAGGAT
AAAGAGGGTTGTACTCCTCTTCACTGGGCTGCTATTAGGGGTCACCTAGAAGCATGTACG
GTGTTGGTGCAGGCAGGGAAGAAGGAAGACCTTATCGTGACAGATAACACTGGCCTTACA
CCTGCTCAGCTTGCTTCTGACAAGAGTCACAGACAAGTTGCTTTTTTCCTTGGAAATGCT
AGGCAGTTATATGACAAACGCTGTGACGGAAGTACCCGGCTTGGCAAACTTTCAAAGCTT
GGACTTGCTCCTGTTCTTTGTTGTACAATATTTCTTCTACTTACCACTTACATTCATGCG
GTAATTTTGGCTTCAACTTTGCCAAAATTAACTGCTGCTGGCGCACTATTTGCATGGTTG
GGAGTTTTCCTTGCTACAGCTGGACTAGTTACATTTTACCGGTGCAGCAGAAAAGATCCA
GGTTACATCCGGAGGAGTCAACATGATTCACAAAATATCAAAGATGATGAACCTTTGCTC
AAATTGGAAATGAATCATCCTGCTTTGCTTGCTGGGAATTGGTCTCAACTTTGCTCCACG
TGCAAGATTGTTCGTCCTCTTCGTGCAAAGCATTGTTCAACCTGTGATCGCTGTGTGGAA
CAATTTGATCATCATTGTCCATGGGTGTCTAATTGCATCGGCAAGAAAAACAAGTGGGAC
TTTTTCAACTTTCTTGTTCTCGAAGTATTGGCAATGGTCTTAACTGGTGCAGTTACTCTT
ACAAGAGTTTTGACTGACCCAGCAGCTCCATCATCGTTTGGGGGTTGGCTGAGTCATGCT
GGTACTCACCATATTGGTGCTTTAGCATTTTTATTTGCAGATTTCTTCCTCTTCGTTGGA
GTGGCAGTCTTAACTGGGGTACAAGCTTCTCAGATATCACACAACATTACAACAAATGAA
ATGGCCAATATGATGCGTTACAGTTACCTCAGAGGACCAGGTGGTCGATTCCGTAATCCA
TATGATCATGGGTGTAAGAAGAACTGTTCAGATTTCTTGATAAACGGTTACAACGAAGAC
GTCGAGTTCATTGAAGAATCGGTTGAGTCCGAAGGGATTGGAATGATGCAGATTCCTCAC
AGTTCAAGTATGCAAAATGGCACCGGCCATTCTCATCCGATCAATGGAAATGGCCATCAT
GTTATCAATATAAGCAACAATAACCAGAACTCACACCAGGCCCATGTTCATTCTGCCCAT
TGTAGTCATAATGTGAAGAGCAAAACTGATTCTGTACCTGTGGGTTTGGGTGTTGGCTTA
GGAAGAAATGCTGCGCGTACCGCGTTACCTTCATAA