Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078838
CDS Infomation

pacid=37433294 polypeptide=PGSC0003DMP400053437 locus=PGSC0003DMG400030684 ID=PGSC0003DMT400078838.v4.03 annot-version=v4.03
Sequence

ATGGCTAAACTGACAATAAGAGCAGAAAACAGTAGTTTCTACCATTTTCCTCACTATGGA
AACCATAAAGTTTCAATCTTTAACAGTTCTTTAAGACCCCAAAGGTTGAATCTTTTAGCC
CAGAAGCATATTTTGAAGTTGAGAGTTTCTTGTAGCATCACAGAGAGGCAAAAAGAAGAA
GCTGCAGAAAAGCAGAGAATAGTTAAAGTGTTGAAGTTGAATGGTGAGGTGGGGAAGAAT
GGGGGATTGATTTCAACTTCCGGGGATGAATTGGGAGAAGCTGGAAATGGGGATAAAGAA
GTTGGTTTTGAATGGGGTTGGCCACCATGGAAGAATTTACCTCAGAGATATAAGCTTATT
GGAACTACTTCTCTTGCCTTTGTTATATGTAACATGGATAAGGTCAATTTGAGTGTTGCC
ATTATTCCAATGTCGCATCAATTCGGGTGGAATTCATCAGTAGCTGGATTGGTCCAGTCA
TCTTTCTTTTGGGGTTATGCATTAAGTCAATTGCCTGGTGGGTGGCTTTCAAAGATATTT
GGTGGGAGTCGAGTTCTTGAAGTTGGAGTACTAATCTGGTCTCTGGCAACAATGTTAGTT
CCCTATCTTGCAGGGTTTATGCCTGCACTCATCTTTTCAAGGATCTTGGTTGGGATAGGA
GAAGGAGTTTCACCATCAGCTGCCACTGATCTGATTGCCAGGACAATACCATTGGAGGAA
CGTTCTCGGGCAGTATCATTTGTTTTTGGTGGCTTGAGTTTTGGAAGTGTTACCGGACTT
CTGTTGGCTCCTCCACTGATCCAAAACTATGGCTGGGAGTCTGTGTTTTACCTGTTTGGC
TTTCTAGGCATAGCTTGGTTTTCGGGATTTCAATTGGTTAAAGAAGATCGGCCCTGGTCT
TTCACAGAACCCATGTCGTGGCCACCGTCTTTTTCTAGAAATAAATCATTGGGAGAGTTG
GGCACCTCTCTAAAGGATGTGCCATGGAAGGCATTTTTTAGAAGCAAGGCTGTATGGGCG
ATGATATATACACATTTCTGTGGGAGTTGGGGCCACTATACTTGCTTATCTTGGCTTCCT
ACCTATTTCAGTGAGGAGCTGAACCTTAATCTGACAGAAGCGGCATGGGTCTCAGTTGGC
CCTCCATTAGCTTCAATTTTTGTTACCAGCATTGCATCACAATTTGCCGATAGCTTGATT
TCCAAAGGTGTTGATACATCACTGGTGAGGAAAATTTGTCAAACAATAGCCTTTTTATCG
CCGGCTACCTGTATGATTCTTTCTTCGTTGGACTTTGGTTTGCCTCCGTGGGAAGTAGTA
ACAATCCTCACCGGTGGTTTAGCCCTTTCAAGTTTTGCTTTGTCAGGCCTATATTGCACC
CATCAAGACATCTCACCTGAATATGCAAGCATTCTTCTGGGCATTACCAACACTGTTGGT
GCAGTTCCTGGAATTGTAGGCGTCCCTCTAACTGGTTATCTTCTTGATTCAACTCACTCA
TGGAGTATTTCTTTGTTTGCACCATCGATTTTCTTCTACCTCACTGGAACCATCGTGTGG
CTGGCATTCGCAAGCAGTAAGCCACAGAGCTTCTCAGAGGGAGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053437
PEP Infomation

pacid=37433294 transcript=PGSC0003DMT400078838 locus=PGSC0003DMG400030684 ID=PGSC0003DMT400078838.v4.03 annot-version=v4.03
Sequence

MAKLTIRAENSSFYHFPHYGNHKVSIFNSSLRPQRLNLLAQKHILKLRVSCSITERQKEE
AAEKQRIVKVLKLNGEVGKNGGLISTSGDELGEAGNGDKEVGFEWGWPPWKNLPQRYKLI
GTTSLAFVICNMDKVNLSVAIIPMSHQFGWNSSVAGLVQSSFFWGYALSQLPGGWLSKIF
GGSRVLEVGVLIWSLATMLVPYLAGFMPALIFSRILVGIGEGVSPSAATDLIARTIPLEE
RSRAVSFVFGGLSFGSVTGLLLAPPLIQNYGWESVFYLFGFLGIAWFSGFQLVKEDRPWS
FTEPMSWPPSFSRNKSLGELGTSLKDVPWKAFFRSKAVWAMIYTHFCGSWGHYTCLSWLP
TYFSEELNLNLTEAAWVSVGPPLASIFVTSIASQFADSLISKGVDTSLVRKICQTIAFLS
PATCMILSSLDFGLPPWEVVTILTGGLALSSFALSGLYCTHQDISPEYASILLGITNTVG
AVPGIVGVPLTGYLLDSTHSWSISLFAPSIFFYLTGTIVWLAFASSKPQSFSEGD*

Transcript Sequence

Transcript ID

PGSC0003DMT400078838
Transcript Infomation

pacid=37433294 locus=PGSC0003DMG400030684 ID=PGSC0003DMT400078838.v4.03 annot-version=v4.03
Sequence

ATGGCTAAACTGACAATAAGAGCAGAAAACAGTAGTTTCTACCATTTTCCTCACTATGGA
AACCATAAAGTTTCAATCTTTAACAGTTCTTTAAGACCCCAAAGGTTGAATCTTTTAGCC
CAGAAGCATATTTTGAAGTTGAGAGTTTCTTGTAGCATCACAGAGAGGCAAAAAGAAGAA
GCTGCAGAAAAGCAGAGAATAGTTAAAGTGTTGAAGTTGAATGGTGAGGTGGGGAAGAAT
GGGGGATTGATTTCAACTTCCGGGGATGAATTGGGAGAAGCTGGAAATGGGGATAAAGAA
GTTGGTTTTGAATGGGGTTGGCCACCATGGAAGAATTTACCTCAGAGATATAAGCTTATT
GGAACTACTTCTCTTGCCTTTGTTATATGTAACATGGATAAGGTCAATTTGAGTGTTGCC
ATTATTCCAATGTCGCATCAATTCGGGTGGAATTCATCAGTAGCTGGATTGGTCCAGTCA
TCTTTCTTTTGGGGTTATGCATTAAGTCAATTGCCTGGTGGGTGGCTTTCAAAGATATTT
GGTGGGAGTCGAGTTCTTGAAGTTGGAGTACTAATCTGGTCTCTGGCAACAATGTTAGTT
CCCTATCTTGCAGGGTTTATGCCTGCACTCATCTTTTCAAGGATCTTGGTTGGGATAGGA
GAAGGAGTTTCACCATCAGCTGCCACTGATCTGATTGCCAGGACAATACCATTGGAGGAA
CGTTCTCGGGCAGTATCATTTGTTTTTGGTGGCTTGAGTTTTGGAAGTGTTACCGGACTT
CTGTTGGCTCCTCCACTGATCCAAAACTATGGCTGGGAGTCTGTGTTTTACCTGTTTGGC
TTTCTAGGCATAGCTTGGTTTTCGGGATTTCAATTGGTTAAAGAAGATCGGCCCTGGTCT
TTCACAGAACCCATGTCGTGGCCACCGTCTTTTTCTAGAAATAAATCATTGGGAGAGTTG
GGCACCTCTCTAAAGGATGTGCCATGGAAGGCATTTTTTAGAAGCAAGGCTGTATGGGCG
ATGATATATACACATTTCTGTGGGAGTTGGGGCCACTATACTTGCTTATCTTGGCTTCCT
ACCTATTTCAGTGAGGAGCTGAACCTTAATCTGACAGAAGCGGCATGGGTCTCAGTTGGC
CCTCCATTAGCTTCAATTTTTGTTACCAGCATTGCATCACAATTTGCCGATAGCTTGATT
TCCAAAGGTGTTGATACATCACTGGTGAGGAAAATTTGTCAAACAATAGCCTTTTTATCG
CCGGCTACCTGTATGATTCTTTCTTCGTTGGACTTTGGTTTGCCTCCGTGGGAAGTAGTA
ACAATCCTCACCGGTGGTTTAGCCCTTTCAAGTTTTGCTTTGTCAGGCCTATATTGCACC
CATCAAGACATCTCACCTGAATATGCAAGCATTCTTCTGGGCATTACCAACACTGTTGGT
GCAGTTCCTGGAATTGTAGGCGTCCCTCTAACTGGTTATCTTCTTGATTCAACTCACTCA
TGGAGTATTTCTTTGTTTGCACCATCGATTTTCTTCTACCTCACTGGAACCATCGTGTGG
CTGGCATTCGCAAGCAGTAAGCCACAGAGCTTCTCAGAGGGAGATTGA