Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078799
CDS Infomation

pacid=37428090 polypeptide=PGSC0003DMP400053408 locus=PGSC0003DMG400030662 ID=PGSC0003DMT400078799.v4.03 annot-version=v4.03
Sequence

ATGACCAAAAATATCCATTTCTTGATTCTGTTCATCTTACTAAACATTCTTGAATTCAAT
GTAAATTTAACCAAATCAAATCCACAACCCCAATTCCCATGTCAACCACCTCATCACAAA
TACACATTCTGCAACAAAAAATTGTCAATCTCCACTAGAGTTCACTCTCTAATCTCTTTA
CTCACCATTGATGAGAAAATTTTACACCTCTCTGATAATACAACTTCAATTCCAAGACTT
GGTTTACCAGCATATGAATGGTGGTCAGAGTCTCTTCATGGTATTGGGACTAATGGACCT
GGGATCAATTTCAATGGCCCCATTAAAAGTGCCACAAGTTTTCCTCAAGTTATTCTTACT
GCAGCTGCTTTCAATAGAACTTTGTGGCATTCGATTGCATCGGCTATTGCAGTTGAGGCA
AGGGCTATGTACAATACGGGTCAATCTGGGCTTACGTTTTGGGCGCCTAATATTAATGTT
TTTAGGGACCCCAGATGGGGAAGAGGTCAAGAAACGCCAGGGGAAGATCCAATGGTGGTT
TCTGCTTATGCTATTGAGTATGTTACGGGATTTCAAGAACTGAATTCGAAGGCGGATAAA
GAAAGTAGTAATGGCCATGGGTTTGGGAATACGAGGAGGGTTCTTAAAGAAGATGATGAT
GCTGGTGATAAGCTGATGTTATCTGCTTGTTGTAAGCATTTCACTGCGTATGACTTGGAG
AAATGGGGTGATGCTACCAGATACGACTTCAATGCTGTGGTGACCAAGCAGGATATGGAG
GACACGTTTCAGGCACCTTTTCGTAGTTGTATCCAACAAGCTAAGGCCAGTTGCTTAATG
TGTAGCTATAATAGTGTGAATGGAGTACCAGCATGTGCAGATAAGGTGCTCTTAGATAAA
GTCCGAACTGACTGGGGGTTCGATGGATACATCACCTCTGATTGTGATGCTGTGGCTACT
ATATATGAAAACCAAAATTACACTAAAACTCCAGAAGATGCGGTTGCTCTTGCTCTTAAA
GCAGGAACAAATATAAACTGTGGAACATACATGCTGCGACACGTGAAATCTGCATTCCAG
CAGGGGAGTGTGCTTGAAGAAGACCTAGACAGAGCACTGCAATACTTGTTTTCTGTTCAA
TTCCGGCTTGGTCTTTTTGATGGAAACCCTGCAAAGGGACAGTTTGCAAAATTTGGACCT
CAAGATGTCTGTACTTCTAATAACTTGGAGTTGGCGCTTGATGCCGCGAGGCAGGGAATT
GTGCTTCTTAAAAATGATCAGAAGTTCTTGCCATTGGACAAGAGAAGTATTTCTACATTA
GCTATAGTCGGTCCTATGGCAAATGTGAGCAGTCCTGGTGGTACTTACACAGGAGTGCCA
TGCAAATTAAAGAGCATACATGAGGGGTTTCACCGTCATATAAATAGAACACTTTATGCA
GCTGGTTGCCTGGACATAGGATGCAATTCCACTGCTGGTTTCCCGGATGCTATTTCTATT
GCTAAAGAAGCTGATTATGTAATTGTTGTGGCTGGGTTGGATTTATCCCAGGAAACTGAG
GATCTTGACCGGTATAGTCTTCTCTTACCAGGTAATCAGACAAACTTAGTTACCGCTCTT
GCAGCTGTAAGTAAGAAACCAATCATTTTGGTTCTTACTGGTGGTGGACCTATTGATGTA
TCCTTTGCTGAGAAAGACCCAAGAATTGCTAGTATCTTATGGGTTGCTTACCCTGGAGAG
ACTGGTGGCAAAGCACTATCCGAGATAATTTTCGGATATCAAAATCCAGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053408
PEP Infomation

pacid=37428090 transcript=PGSC0003DMT400078799 locus=PGSC0003DMG400030662 ID=PGSC0003DMT400078799.v4.03 annot-version=v4.03
Sequence

MTKNIHFLILFILLNILEFNVNLTKSNPQPQFPCQPPHHKYTFCNKKLSISTRVHSLISL
LTIDEKILHLSDNTTSIPRLGLPAYEWWSESLHGIGTNGPGINFNGPIKSATSFPQVILT
AAAFNRTLWHSIASAIAVEARAMYNTGQSGLTFWAPNINVFRDPRWGRGQETPGEDPMVV
SAYAIEYVTGFQELNSKADKESSNGHGFGNTRRVLKEDDDAGDKLMLSACCKHFTAYDLE
KWGDATRYDFNAVVTKQDMEDTFQAPFRSCIQQAKASCLMCSYNSVNGVPACADKVLLDK
VRTDWGFDGYITSDCDAVATIYENQNYTKTPEDAVALALKAGTNINCGTYMLRHVKSAFQ
QGSVLEEDLDRALQYLFSVQFRLGLFDGNPAKGQFAKFGPQDVCTSNNLELALDAARQGI
VLLKNDQKFLPLDKRSISTLAIVGPMANVSSPGGTYTGVPCKLKSIHEGFHRHINRTLYA
AGCLDIGCNSTAGFPDAISIAKEADYVIVVAGLDLSQETEDLDRYSLLLPGNQTNLVTAL
AAVSKKPIILVLTGGGPIDVSFAEKDPRIASILWVAYPGETGGKALSEIIFGYQNPG*

Transcript Sequence

Transcript ID

PGSC0003DMT400078799
Transcript Infomation

pacid=37428090 locus=PGSC0003DMG400030662 ID=PGSC0003DMT400078799.v4.03 annot-version=v4.03
Sequence

ATGACCAAAAATATCCATTTCTTGATTCTGTTCATCTTACTAAACATTCTTGAATTCAAT
GTAAATTTAACCAAATCAAATCCACAACCCCAATTCCCATGTCAACCACCTCATCACAAA
TACACATTCTGCAACAAAAAATTGTCAATCTCCACTAGAGTTCACTCTCTAATCTCTTTA
CTCACCATTGATGAGAAAATTTTACACCTCTCTGATAATACAACTTCAATTCCAAGACTT
GGTTTACCAGCATATGAATGGTGGTCAGAGTCTCTTCATGGTATTGGGACTAATGGACCT
GGGATCAATTTCAATGGCCCCATTAAAAGTGCCACAAGTTTTCCTCAAGTTATTCTTACT
GCAGCTGCTTTCAATAGAACTTTGTGGCATTCGATTGCATCGGCTATTGCAGTTGAGGCA
AGGGCTATGTACAATACGGGTCAATCTGGGCTTACGTTTTGGGCGCCTAATATTAATGTT
TTTAGGGACCCCAGATGGGGAAGAGGTCAAGAAACGCCAGGGGAAGATCCAATGGTGGTT
TCTGCTTATGCTATTGAGTATGTTACGGGATTTCAAGAACTGAATTCGAAGGCGGATAAA
GAAAGTAGTAATGGCCATGGGTTTGGGAATACGAGGAGGGTTCTTAAAGAAGATGATGAT
GCTGGTGATAAGCTGATGTTATCTGCTTGTTGTAAGCATTTCACTGCGTATGACTTGGAG
AAATGGGGTGATGCTACCAGATACGACTTCAATGCTGTGGTGACCAAGCAGGATATGGAG
GACACGTTTCAGGCACCTTTTCGTAGTTGTATCCAACAAGCTAAGGCCAGTTGCTTAATG
TGTAGCTATAATAGTGTGAATGGAGTACCAGCATGTGCAGATAAGGTGCTCTTAGATAAA
GTCCGAACTGACTGGGGGTTCGATGGATACATCACCTCTGATTGTGATGCTGTGGCTACT
ATATATGAAAACCAAAATTACACTAAAACTCCAGAAGATGCGGTTGCTCTTGCTCTTAAA
GCAGGAACAAATATAAACTGTGGAACATACATGCTGCGACACGTGAAATCTGCATTCCAG
CAGGGGAGTGTGCTTGAAGAAGACCTAGACAGAGCACTGCAATACTTGTTTTCTGTTCAA
TTCCGGCTTGGTCTTTTTGATGGAAACCCTGCAAAGGGACAGTTTGCAAAATTTGGACCT
CAAGATGTCTGTACTTCTAATAACTTGGAGTTGGCGCTTGATGCCGCGAGGCAGGGAATT
GTGCTTCTTAAAAATGATCAGAAGTTCTTGCCATTGGACAAGAGAAGTATTTCTACATTA
GCTATAGTCGGTCCTATGGCAAATGTGAGCAGTCCTGGTGGTACTTACACAGGAGTGCCA
TGCAAATTAAAGAGCATACATGAGGGGTTTCACCGTCATATAAATAGAACACTTTATGCA
GCTGGTTGCCTGGACATAGGATGCAATTCCACTGCTGGTTTCCCGGATGCTATTTCTATT
GCTAAAGAAGCTGATTATGTAATTGTTGTGGCTGGGTTGGATTTATCCCAGGAAACTGAG
GATCTTGACCGGTATAGTCTTCTCTTACCAGGTAATCAGACAAACTTAGTTACCGCTCTT
GCAGCTGTAAGTAAGAAACCAATCATTTTGGTTCTTACTGGTGGTGGACCTATTGATGTA
TCCTTTGCTGAGAAAGACCCAAGAATTGCTAGTATCTTATGGGTTGCTTACCCTGGAGAG
ACTGGTGGCAAAGCACTATCCGAGATAATTTTCGGATATCAAAATCCAGGTTAG