Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078780
CDS Infomation

pacid=37425645 polypeptide=PGSC0003DMP400053397 locus=PGSC0003DMG400030653 ID=PGSC0003DMT400078780.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTCATGTTACTGCTTTCTCCTTCACTGGAGTTTCTACTTCAAGTAAAGCTTCC
AGAAGCTCTTTGCTTTCAGTTTTTCCTGCTCCTAGAAGATGCACTGTCAAAGCTGCTTCC
CAGTATCCGCCCAGCATTCCTCGATGTAAAATTCAAGGAAGAGCATTGCCAAGTGACAAT
GGGCCACTGGAGAAGGATGAATCTTCTCTTGTTGTGTGCTTTGGAGAAATGCTTATTGAT
TTTGTTCCGACTATAAGTGGGCTTTCATTGGCTGAAGCCCCTGCATTTAAAAAGGCTCCT
GGTGGTGCACCAGCTAATGTTGCTGTTGGAATTTCCCGTCTTGGTGGTTCATCAGCTTTC
ATTGGCAAGGTTGGTGAAGACGAATTTGGTTACATGCTTGCTGAGATTTTGAAGGAGAAC
AACGTCAACAGTGATGGTATGCGCTTTGATCCAGGTGCTCGTACTGCTTTAGCATTTGTA
ACACTGAGAAAGGATGGAGAACGTGAATTTATGTTCTATCGTAACCCGAGTGCTGATATG
TTGCTTCAAGAGGATGAACTTGATTTAGAGTTGATCAGGAAGGCAAAAGTTTTTCATTAT
GGTTCCATAAGTCTGATTACAGAGCCATGCAAATCAGCCCATATTGCAGCTGCAAAAGCT
GCGAAGGATGCTGGTGTGATCTTATCCTATGATCCCAATTTGAGGCTTCCATTGTGGCCA
TCTGCAGAAAGTGCTAGAGAAGGAATCCTTAGCATATGGGATACTGCTGATATAATTAAG
ATAAGTGAAGAAGAGATTTCGTTTTTGACACAAGGAGAAGATCCTTATGATGATAATGTT
GTTCGTAAGTTGTACCATCCAAACCTCAAGTTACTCCTCGTCACAGAAGGTCCAGAAGGT
TGCCGATATTACACCAAGGATTTCAGTGGACGAGTTAAGGGTATAAAGGTGGACGCCGTG
GACACCACCGGTGCTGGAGATGCTTTTGTAGCCGGAATATTGTCACAGCTAGCATCTGAT
GTCTCGCTGCTTCAGGATGAGAGCAAGCTTCGAGATGCCCTTAGTTTTGCTAATGCTTGT
GGTGCATTGACTGTGATGGAGAGAGGAGCAATTCCAGCTTTGCCAACAAGAGAAGTAGTG
TTGAACGCCTTGCTCAAGTCAGTTGCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400053397
PEP Infomation

pacid=37425645 transcript=PGSC0003DMT400078780 locus=PGSC0003DMG400030653 ID=PGSC0003DMT400078780.v4.03 annot-version=v4.03
Sequence

MALHVTAFSFTGVSTSSKASRSSLLSVFPAPRRCTVKAASQYPPSIPRCKIQGRALPSDN
GPLEKDESSLVVCFGEMLIDFVPTISGLSLAEAPAFKKAPGGAPANVAVGISRLGGSSAF
IGKVGEDEFGYMLAEILKENNVNSDGMRFDPGARTALAFVTLRKDGEREFMFYRNPSADM
LLQEDELDLELIRKAKVFHYGSISLITEPCKSAHIAAAKAAKDAGVILSYDPNLRLPLWP
SAESAREGILSIWDTADIIKISEEEISFLTQGEDPYDDNVVRKLYHPNLKLLLVTEGPEG
CRYYTKDFSGRVKGIKVDAVDTTGAGDAFVAGILSQLASDVSLLQDESKLRDALSFANAC
GALTVMERGAIPALPTREVVLNALLKSVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400078780
Transcript Infomation

pacid=37425645 locus=PGSC0003DMG400030653 ID=PGSC0003DMT400078780.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTCATGTTACTGCTTTCTCCTTCACTGGAGTTTCTACTTCAAGTAAAGCTTCC
AGAAGCTCTTTGCTTTCAGTTTTTCCTGCTCCTAGAAGATGCACTGTCAAAGCTGCTTCC
CAGTATCCGCCCAGCATTCCTCGATGTAAAATTCAAGGAAGAGCATTGCCAAGTGACAAT
GGGCCACTGGAGAAGGATGAATCTTCTCTTGTTGTGTGCTTTGGAGAAATGCTTATTGAT
TTTGTTCCGACTATAAGTGGGCTTTCATTGGCTGAAGCCCCTGCATTTAAAAAGGCTCCT
GGTGGTGCACCAGCTAATGTTGCTGTTGGAATTTCCCGTCTTGGTGGTTCATCAGCTTTC
ATTGGCAAGGTTGGTGAAGACGAATTTGGTTACATGCTTGCTGAGATTTTGAAGGAGAAC
AACGTCAACAGTGATGGTATGCGCTTTGATCCAGGTGCTCGTACTGCTTTAGCATTTGTA
ACACTGAGAAAGGATGGAGAACGTGAATTTATGTTCTATCGTAACCCGAGTGCTGATATG
TTGCTTCAAGAGGATGAACTTGATTTAGAGTTGATCAGGAAGGCAAAAGTTTTTCATTAT
GGTTCCATAAGTCTGATTACAGAGCCATGCAAATCAGCCCATATTGCAGCTGCAAAAGCT
GCGAAGGATGCTGGTGTGATCTTATCCTATGATCCCAATTTGAGGCTTCCATTGTGGCCA
TCTGCAGAAAGTGCTAGAGAAGGAATCCTTAGCATATGGGATACTGCTGATATAATTAAG
ATAAGTGAAGAAGAGATTTCGTTTTTGACACAAGGAGAAGATCCTTATGATGATAATGTT
GTTCGTAAGTTGTACCATCCAAACCTCAAGTTACTCCTCGTCACAGAAGGTCCAGAAGGT
TGCCGATATTACACCAAGGATTTCAGTGGACGAGTTAAGGGTATAAAGGTGGACGCCGTG
GACACCACCGGTGCTGGAGATGCTTTTGTAGCCGGAATATTGTCACAGCTAGCATCTGAT
GTCTCGCTGCTTCAGGATGAGAGCAAGCTTCGAGATGCCCTTAGTTTTGCTAATGCTTGT
GGTGCATTGACTGTGATGGAGAGAGGAGCAATTCCAGCTTTGCCAACAAGAGAAGTAGTG
TTGAACGCCTTGCTCAAGTCAGTTGCATAA