Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078760
CDS Infomation

pacid=37427269 polypeptide=PGSC0003DMP400053381 locus=PGSC0003DMG400030643 ID=PGSC0003DMT400078760.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTGAAGCAGCAATAGAGTTAGTGAAGCATGGCGCTACCTTGCTACTTCTTGAT
GTTCCTCAGAATACCCTCATCGGTATTGATACCCAGATGTTTTTCTCTGGGCCTAATTTC
AAAGGTGTGAAGATGATTCCTCCTGGCGTCCATTTCATCTATTACAGTTCATCCAACAGA
GAAGGGAATGAGTTCTCACCAATAGTTGGTTTTTTCGTTGAGGCGAGCCCTTCAGAGGTA
ATTGTTAAGAAATGGGATTCAAAGGATGAGCGATTTGTCAAATTATCCGAAGAAGAGGGA
GAGAGATATGCTCAAGCGGTGAAAAAATTGGAGTTTGACAGACAACTTGGCCCTTATGCA
TTGGATCAGTACGGAGATTGGAAGCGCTTATCTAACTTTATTACGAAGAGTACCATTGAA
AGTATTGAACCTATTGGAGGAGAAATCACAATTATTTCTGAATCTGAAATGGTTGGGAAT
GTTCATAAGACAGCCATGGAGAAAGTCTTGGCTGAGCAGTTGAAAAATAGCAAGTTCTCG
AAGCCTGATAAGAAGTCACCAAGTAACGGTTGTTATTACACCTCAATTCCTCGTGTTATC
AAGCTAAAGGGAGTTTCAGGACAAGATCTTACTAACATGAATCTTGACAAGACACACATA
TTGGAGACCATTCTGACGAAGCAATATGGTGGTTCAGAAGATTCACTTCTGGGAGAACTA
CAATTTGCCTTTGTAGCATTTCTGATGGGACAATCACTTGAAGCTTTTCTGCAGTGGAAG
CTTTTAGTCAGCCTATTACTTGGATGTACAGAAGCTCCTCTCCACACAAGGACTCAGCTA
TTCACCAAGTTCATCAAAGCAATATATTATCAGTTGAAAATTGGATTTCAAAAGGATAGT
AAGGATACTAGCAGGGCAGAGAAGGGTGCAACAACATCGTTGGACGAGTCCTTGTTGTCT
GCTGATAACTTCCTGCGCCACCTTTGTAAGGATTTCTTCTCATTGGTGCTTGATGCCCCC
ATGGTTGATGGAGACCTCCTGACTTGGACTAGAAAACTGAGAGAACTGCTTGAGCGGACT
CTTGGATGGGACTTCCAGCCGAATAGTTCAGTTGATGGTATGCATCTTGAAGAAGATGAT
GAGTTTGCTCCAGTGGTGGAGATTCTAGATCTAGATCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053381
PEP Infomation

pacid=37427269 transcript=PGSC0003DMT400078760 locus=PGSC0003DMG400030643 ID=PGSC0003DMT400078760.v4.03 annot-version=v4.03
Sequence

MEAEAAIELVKHGATLLLLDVPQNTLIGIDTQMFFSGPNFKGVKMIPPGVHFIYYSSSNR
EGNEFSPIVGFFVEASPSEVIVKKWDSKDERFVKLSEEEGERYAQAVKKLEFDRQLGPYA
LDQYGDWKRLSNFITKSTIESIEPIGGEITIISESEMVGNVHKTAMEKVLAEQLKNSKFS
KPDKKSPSNGCYYTSIPRVIKLKGVSGQDLTNMNLDKTHILETILTKQYGGSEDSLLGEL
QFAFVAFLMGQSLEAFLQWKLLVSLLLGCTEAPLHTRTQLFTKFIKAIYYQLKIGFQKDS
KDTSRAEKGATTSLDESLLSADNFLRHLCKDFFSLVLDAPMVDGDLLTWTRKLRELLERT
LGWDFQPNSSVDGMHLEEDDEFAPVVEILDLDH*

Transcript Sequence

Transcript ID

PGSC0003DMT400078760
Transcript Infomation

pacid=37427269 locus=PGSC0003DMG400030643 ID=PGSC0003DMT400078760.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTGAAGCAGCAATAGAGTTAGTGAAGCATGGCGCTACCTTGCTACTTCTTGAT
GTTCCTCAGAATACCCTCATCGGTATTGATACCCAGATGTTTTTCTCTGGGCCTAATTTC
AAAGGTGTGAAGATGATTCCTCCTGGCGTCCATTTCATCTATTACAGTTCATCCAACAGA
GAAGGGAATGAGTTCTCACCAATAGTTGGTTTTTTCGTTGAGGCGAGCCCTTCAGAGGTA
ATTGTTAAGAAATGGGATTCAAAGGATGAGCGATTTGTCAAATTATCCGAAGAAGAGGGA
GAGAGATATGCTCAAGCGGTGAAAAAATTGGAGTTTGACAGACAACTTGGCCCTTATGCA
TTGGATCAGTACGGAGATTGGAAGCGCTTATCTAACTTTATTACGAAGAGTACCATTGAA
AGTATTGAACCTATTGGAGGAGAAATCACAATTATTTCTGAATCTGAAATGGTTGGGAAT
GTTCATAAGACAGCCATGGAGAAAGTCTTGGCTGAGCAGTTGAAAAATAGCAAGTTCTCG
AAGCCTGATAAGAAGTCACCAAGTAACGGTTGTTATTACACCTCAATTCCTCGTGTTATC
AAGCTAAAGGGAGTTTCAGGACAAGATCTTACTAACATGAATCTTGACAAGACACACATA
TTGGAGACCATTCTGACGAAGCAATATGGTGGTTCAGAAGATTCACTTCTGGGAGAACTA
CAATTTGCCTTTGTAGCATTTCTGATGGGACAATCACTTGAAGCTTTTCTGCAGTGGAAG
CTTTTAGTCAGCCTATTACTTGGATGTACAGAAGCTCCTCTCCACACAAGGACTCAGCTA
TTCACCAAGTTCATCAAAGCAATATATTATCAGTTGAAAATTGGATTTCAAAAGGATAGT
AAGGATACTAGCAGGGCAGAGAAGGGTGCAACAACATCGTTGGACGAGTCCTTGTTGTCT
GCTGATAACTTCCTGCGCCACCTTTGTAAGGATTTCTTCTCATTGGTGCTTGATGCCCCC
ATGGTTGATGGAGACCTCCTGACTTGGACTAGAAAACTGAGAGAACTGCTTGAGCGGACT
CTTGGATGGGACTTCCAGCCGAATAGTTCAGTTGATGGTATGCATCTTGAAGAAGATGAT
GAGTTTGCTCCAGTGGTGGAGATTCTAGATCTAGATCACTGA