Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078696
CDS Infomation

pacid=37426395 polypeptide=PGSC0003DMP400053329 locus=PGSC0003DMG402030621 ID=PGSC0003DMT400078696.v4.03 annot-version=v4.03
Sequence

ATGGACAATTCATCGCTAAGTCAATGGTTTTCAAGAACGGAAGAAGGTGTGTTCAACTCG
AATAAAAACACTTCCATCGATGATTTCACCACTCAAAAATCCACAATCTCTGAAGATCAA
GAGACTAGTGAACTGTCTATTACTCCAGATAGTACTCGTGCTAATTCACGTTCTTATTTT
CATCAAGAAATTAGCAAAAGTAAATCGAAAATCACCCCTATGGAAAATTTCCCAATTGGT
TCAAAGAGACCTGCAATTGATGATGATCATCAGCCCAAATTGAATAAGATCTCTTCATCT
TCACATCGTTTTCTTTCTTTTAATAATAATATGGATTCAGTATTTCCTAGTCATCAAGGA
TGTAAAATAGAAGCTGTGGATGAGATGTATTTGTGTGATTCATCAGATCAGATGTTTTTT
CCATATGTGAAATCGAACGGTTGTTACGATGTGAAGGATAAAGAAGGGGGGAAAAGAATT
CCTTCAGTAGAATTACAACATCATATTATTGCTGAGAGGAAGCGCAGAGAGAAACTTAGC
CAGAGGTTTGTCGCACTTTCAGCAATTCTTCCAAGCCTAAAAAAGGTGGACAAAGCTTCA
ATTCTTGAGCAAGCAATCAAACATGTGAAAGAGCTTAAAGAAAAAGTGCAACTATTGGAA
GAAGAGAAAAAGAGTGGACCGTCCCAGCAGAATTCAGTTATGTTTGTGAATAAATCTAAG
CTGGAAATAGAAGAGTACTCTTCATCTGAAGAAAACAATAATAATATTGGCAGCGATTTA
CGGGTAGATATTGAAGTAAGATATTCAGATAATAATGTATTGATCAGAATTACGTGTGCG
CGGAGCAACGCCTTTGTGCTGAATATCCATAACGAAATAGAGAAGCTTCATCTTACCATT
CTTCAAAGCTGTATGATGCCATTTGGGAAACAAGCAATTGATATCACACTAGTAGCTCAG
ATGGATGAAAGTTTCTGCATGACACTAAAGGATGTTGCGAAGCATGTTCGAATGGTCACT
GGGAGGTTGATGACCCAAGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053329
PEP Infomation

pacid=37426395 transcript=PGSC0003DMT400078696 locus=PGSC0003DMG402030621 ID=PGSC0003DMT400078696.v4.03 annot-version=v4.03
Sequence

MDNSSLSQWFSRTEEGVFNSNKNTSIDDFTTQKSTISEDQETSELSITPDSTRANSRSYF
HQEISKSKSKITPMENFPIGSKRPAIDDDHQPKLNKISSSSHRFLSFNNNMDSVFPSHQG
CKIEAVDEMYLCDSSDQMFFPYVKSNGCYDVKDKEGGKRIPSVELQHHIIAERKRREKLS
QRFVALSAILPSLKKVDKASILEQAIKHVKELKEKVQLLEEEKKSGPSQQNSVMFVNKSK
LEIEEYSSSEENNNNIGSDLRVDIEVRYSDNNVLIRITCARSNAFVLNIHNEIEKLHLTI
LQSCMMPFGKQAIDITLVAQMDESFCMTLKDVAKHVRMVTGRLMTQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400078696
Transcript Infomation

pacid=37426395 locus=PGSC0003DMG402030621 ID=PGSC0003DMT400078696.v4.03 annot-version=v4.03
Sequence

ATGGACAATTCATCGCTAAGTCAATGGTTTTCAAGAACGGAAGAAGGTGTGTTCAACTCG
AATAAAAACACTTCCATCGATGATTTCACCACTCAAAAATCCACAATCTCTGAAGATCAA
GAGACTAGTGAACTGTCTATTACTCCAGATAGTACTCGTGCTAATTCACGTTCTTATTTT
CATCAAGAAATTAGCAAAAGTAAATCGAAAATCACCCCTATGGAAAATTTCCCAATTGGT
TCAAAGAGACCTGCAATTGATGATGATCATCAGCCCAAATTGAATAAGATCTCTTCATCT
TCACATCGTTTTCTTTCTTTTAATAATAATATGGATTCAGTATTTCCTAGTCATCAAGGA
TGTAAAATAGAAGCTGTGGATGAGATGTATTTGTGTGATTCATCAGATCAGATGTTTTTT
CCATATGTGAAATCGAACGGTTGTTACGATGTGAAGGATAAAGAAGGGGGGAAAAGAATT
CCTTCAGTAGAATTACAACATCATATTATTGCTGAGAGGAAGCGCAGAGAGAAACTTAGC
CAGAGGTTTGTCGCACTTTCAGCAATTCTTCCAAGCCTAAAAAAGGTGGACAAAGCTTCA
ATTCTTGAGCAAGCAATCAAACATGTGAAAGAGCTTAAAGAAAAAGTGCAACTATTGGAA
GAAGAGAAAAAGAGTGGACCGTCCCAGCAGAATTCAGTTATGTTTGTGAATAAATCTAAG
CTGGAAATAGAAGAGTACTCTTCATCTGAAGAAAACAATAATAATATTGGCAGCGATTTA
CGGGTAGATATTGAAGTAAGATATTCAGATAATAATGTATTGATCAGAATTACGTGTGCG
CGGAGCAACGCCTTTGTGCTGAATATCCATAACGAAATAGAGAAGCTTCATCTTACCATT
CTTCAAAGCTGTATGATGCCATTTGGGAAACAAGCAATTGATATCACACTAGTAGCTCAG
ATGGATGAAAGTTTCTGCATGACACTAAAGGATGTTGCGAAGCATGTTCGAATGGTCACT
GGGAGGTTGATGACCCAAGCTTAG