Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078679
CDS Infomation

pacid=37425429 polypeptide=PGSC0003DMP400053322 locus=PGSC0003DMG400030618 ID=PGSC0003DMT400078679.v4.03 annot-version=v4.03
Sequence

ATGTCAGTGGCATACCGCATACCTTATATCTGTTACATTACATTTCTGTTCTTGCAGAAC
AATAAGAGCTCTGCATCAAAACACACAGGATCAAAATCTGGTACCAGCAACAATGCACCA
AAAGTCAATAATGGGTTAAAAACAAAGGTGCAGATGTTAAAAAATACAAGAGATTACTCA
TTTCTATTATCTGATGATGCTGAACTTCCTGTTCCATCAAAAGGTTCTCTACCTCATAAA
ACATCTGTTGCTAATTCTGCTTTACCACCAAGCACCAAGCAATTTTCAAGCAATACTGGG
AGAAAGTTGCTAGATGATCGTGTAGTACGGAAACCTATACTGGGAAGCAGTCAAATGCCA
CATCAACTGTTGAGTCAGAAATCTGTTTCTGTTAGTAAACAAACTCAACTAGCATTAGAT
TCCAGGAAACAACTGGGTAGCAGTAAAGGGAGTGGGCCTGGCCGGCCTTTGGGAGTGCAG
CCCAAAATCATAGGTGGTCCAAACGGCAAGAGGGTTTTGATACCAGGTGTAAAGAGCACT
GTGCCTGCTTTGCATAAGCCAACCTCTTCAAAGTTGCAACCTTCTATTCCAAGGCAATAC
TTGGTACAGAAAAAGGAAATACTACAATCTGGAAAATCAAAGGTGATGCCACAACAAGCT
GAGCCTTCATACAAACATAAGCCGATTATGCAGAAACAGGCAGTGCCGTCGTCTAATTCT
CAGGTCTCACCTATATTTTCATTTGCATGCTATCCATTTTATCTTTTCCTTCTCTTGCAG
AGAATGAAGACCTACTTGCCCTTCATTTTGGTTTGGGTCCTTCGTGGGGGGTGGGTGGTT
GTTCCAAGGAGTAGTAGTGGTGATGAAGACATGCTGATCTTGATTTTTGATTTTAACAGA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400053322
PEP Infomation

pacid=37425429 transcript=PGSC0003DMT400078679 locus=PGSC0003DMG400030618 ID=PGSC0003DMT400078679.v4.03 annot-version=v4.03
Sequence

MSVAYRIPYICYITFLFLQNNKSSASKHTGSKSGTSNNAPKVNNGLKTKVQMLKNTRDYS
FLLSDDAELPVPSKGSLPHKTSVANSALPPSTKQFSSNTGRKLLDDRVVRKPILGSSQMP
HQLLSQKSVSVSKQTQLALDSRKQLGSSKGSGPGRPLGVQPKIIGGPNGKRVLIPGVKST
VPALHKPTSSKLQPSIPRQYLVQKKEILQSGKSKVMPQQAEPSYKHKPIMQKQAVPSSNS
QVSPIFSFACYPFYLFLLLQRMKTYLPFILVWVLRGGWVVVPRSSSGDEDMLILIFDFNR
*

Transcript Sequence

Transcript ID

PGSC0003DMT400078679
Transcript Infomation

pacid=37425429 locus=PGSC0003DMG400030618 ID=PGSC0003DMT400078679.v4.03 annot-version=v4.03
Sequence

ATGTCAGTGGCATACCGCATACCTTATATCTGTTACATTACATTTCTGTTCTTGCAGAAC
AATAAGAGCTCTGCATCAAAACACACAGGATCAAAATCTGGTACCAGCAACAATGCACCA
AAAGTCAATAATGGGTTAAAAACAAAGGTGCAGATGTTAAAAAATACAAGAGATTACTCA
TTTCTATTATCTGATGATGCTGAACTTCCTGTTCCATCAAAAGGTTCTCTACCTCATAAA
ACATCTGTTGCTAATTCTGCTTTACCACCAAGCACCAAGCAATTTTCAAGCAATACTGGG
AGAAAGTTGCTAGATGATCGTGTAGTACGGAAACCTATACTGGGAAGCAGTCAAATGCCA
CATCAACTGTTGAGTCAGAAATCTGTTTCTGTTAGTAAACAAACTCAACTAGCATTAGAT
TCCAGGAAACAACTGGGTAGCAGTAAAGGGAGTGGGCCTGGCCGGCCTTTGGGAGTGCAG
CCCAAAATCATAGGTGGTCCAAACGGCAAGAGGGTTTTGATACCAGGTGTAAAGAGCACT
GTGCCTGCTTTGCATAAGCCAACCTCTTCAAAGTTGCAACCTTCTATTCCAAGGCAATAC
TTGGTACAGAAAAAGGAAATACTACAATCTGGAAAATCAAAGGTGATGCCACAACAAGCT
GAGCCTTCATACAAACATAAGCCGATTATGCAGAAACAGGCAGTGCCGTCGTCTAATTCT
CAGGTCTCACCTATATTTTCATTTGCATGCTATCCATTTTATCTTTTCCTTCTCTTGCAG
AGAATGAAGACCTACTTGCCCTTCATTTTGGTTTGGGTCCTTCGTGGGGGGTGGGTGGTT
GTTCCAAGGAGTAGTAGTGGTGATGAAGACATGCTGATCTTGATTTTTGATTTTAACAGA
TAA