Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078677
CDS Infomation

pacid=37426813 polypeptide=PGSC0003DMP400053320 locus=PGSC0003DMG400030617 ID=PGSC0003DMT400078677.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAACTTCTGTTGCTCGGTTCAATCCGATACCGGAATCCGATGAGTATGATGAA
GAGAATGATAATGTGGTGGAAGAATTTCAAGGATTTTTCGTGGACGCAAACGTGAAGCCG
GAGAAGGAAAGTTTGGTAAATTTTACCAACTTCGAGGCGAGGTTATTGCCTGAAGCAGCC
GTTGTATCTGTTGGCCGGAGTTATGAAACGTATGTGATAATATTGAAACTTAAAGCTCCA
CCGGTGTTGACAAGGACAGCCCGAAGAGCACCTATTGATCTTGTTATGGTGCTTGATGTT
AGTGGGAAAATGAAAGCTCAGGATATCCAAATGATGAAACGTGCCATGAGGTTAGTAATA
TCAACGCTATCCACATCCGATCGGCTTTCAATTGTGGCCTTCTCTACAACCTCCAAACGG
CTTTTACCATTACGGAGAATGACAACAAGCGGAAAACGATCGGCACGTCGCATTGTTGAT
GCCATTGTTGCTCTAGATGGAACAGGAACCAGTGCAAGCGACGCTCTAAAAAAGGCTGCG
AAAGTTCTAGAAGATCGCAGAGAGCGTAACCCCGTCGCTAGCATCATGCTCTTATCAGAC
TGTCCAAATGATCGTCTCACCACCACCATCTCCACCAATCAAAGGTATCAATCTACCATC
GTTTCCACCTGCACGCGCTTCAACAACTCGGAGATTCCGGTACATTCTATCGGACTGAAC
CAATCCAACGATGATGTATTCAAAAAATTCATCGGAGGCATAATAAACGTCGTCGTTCAG
GATCTCCGAGTTCAAGTGGGATTCGTTTCCGGTTCAGCGCCGGCGGAAGTAGCGGCGGTT
TATTCATACACAAACCGGCCCGCTGCTCTAGGTTCCGGTTCTCTCCGACTCGGCGATTTC
TACGCGGAGGAAGAAAGGGAATTGTTGGTGGAACTAAAAGTTCCCACGTCAGCAATTGGG
ACCCACCATGTATTGTCCGTTCGATGCTCTTACAAAGACCCATCAACTCAAGAGCTCGTA
TACTGTAAAGAACAAGCTCTTTTGGTCCCACGTCCCCACGCCGTTCGATCATCAACCCCT
AATATCCAACGGCTCAGAGATCTTTTCATTTCGACTCGAGCCATGGCTGAGTCTAAGCGA
TTGATTGAACGAAACGACTTAACCGGCGCGCACCACATGTTATCCTCTGCTCGTGCTTTG
TTAGTTCAGTCAAATTCCAGCTCAGCTGGTGAATTCGTTCATGGCTTAGAAACCGAGCTG
TCTGAGCTTCATTACAGAAGGCAAAATCAAACTCAGCAGCCACATCGACGAAGAATAAAC
GTACAACAAAGAGAAGATGATAAAGCTGAGCCGCTTACACCTACATCGGCTTGGAGAGCC
GCTGAACGGCTAGCTAAAGTGGCTATAATGAGAAAATCGTTGAATAGAGTCAGTGATTTA
CACGGCTTCGAAGATGCAAGATTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053320
PEP Infomation

pacid=37426813 transcript=PGSC0003DMT400078677 locus=PGSC0003DMG400030617 ID=PGSC0003DMT400078677.v4.03 annot-version=v4.03
Sequence

MSPTSVARFNPIPESDEYDEENDNVVEEFQGFFVDANVKPEKESLVNFTNFEARLLPEAA
VVSVGRSYETYVIILKLKAPPVLTRTARRAPIDLVMVLDVSGKMKAQDIQMMKRAMRLVI
STLSTSDRLSIVAFSTTSKRLLPLRRMTTSGKRSARRIVDAIVALDGTGTSASDALKKAA
KVLEDRRERNPVASIMLLSDCPNDRLTTTISTNQRYQSTIVSTCTRFNNSEIPVHSIGLN
QSNDDVFKKFIGGIINVVVQDLRVQVGFVSGSAPAEVAAVYSYTNRPAALGSGSLRLGDF
YAEEERELLVELKVPTSAIGTHHVLSVRCSYKDPSTQELVYCKEQALLVPRPHAVRSSTP
NIQRLRDLFISTRAMAESKRLIERNDLTGAHHMLSSARALLVQSNSSSAGEFVHGLETEL
SELHYRRQNQTQQPHRRRINVQQREDDKAEPLTPTSAWRAAERLAKVAIMRKSLNRVSDL
HGFEDARF*

Transcript Sequence

Transcript ID

PGSC0003DMT400078677
Transcript Infomation

pacid=37426813 locus=PGSC0003DMG400030617 ID=PGSC0003DMT400078677.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAACTTCTGTTGCTCGGTTCAATCCGATACCGGAATCCGATGAGTATGATGAA
GAGAATGATAATGTGGTGGAAGAATTTCAAGGATTTTTCGTGGACGCAAACGTGAAGCCG
GAGAAGGAAAGTTTGGTAAATTTTACCAACTTCGAGGCGAGGTTATTGCCTGAAGCAGCC
GTTGTATCTGTTGGCCGGAGTTATGAAACGTATGTGATAATATTGAAACTTAAAGCTCCA
CCGGTGTTGACAAGGACAGCCCGAAGAGCACCTATTGATCTTGTTATGGTGCTTGATGTT
AGTGGGAAAATGAAAGCTCAGGATATCCAAATGATGAAACGTGCCATGAGGTTAGTAATA
TCAACGCTATCCACATCCGATCGGCTTTCAATTGTGGCCTTCTCTACAACCTCCAAACGG
CTTTTACCATTACGGAGAATGACAACAAGCGGAAAACGATCGGCACGTCGCATTGTTGAT
GCCATTGTTGCTCTAGATGGAACAGGAACCAGTGCAAGCGACGCTCTAAAAAAGGCTGCG
AAAGTTCTAGAAGATCGCAGAGAGCGTAACCCCGTCGCTAGCATCATGCTCTTATCAGAC
TGTCCAAATGATCGTCTCACCACCACCATCTCCACCAATCAAAGGTATCAATCTACCATC
GTTTCCACCTGCACGCGCTTCAACAACTCGGAGATTCCGGTACATTCTATCGGACTGAAC
CAATCCAACGATGATGTATTCAAAAAATTCATCGGAGGCATAATAAACGTCGTCGTTCAG
GATCTCCGAGTTCAAGTGGGATTCGTTTCCGGTTCAGCGCCGGCGGAAGTAGCGGCGGTT
TATTCATACACAAACCGGCCCGCTGCTCTAGGTTCCGGTTCTCTCCGACTCGGCGATTTC
TACGCGGAGGAAGAAAGGGAATTGTTGGTGGAACTAAAAGTTCCCACGTCAGCAATTGGG
ACCCACCATGTATTGTCCGTTCGATGCTCTTACAAAGACCCATCAACTCAAGAGCTCGTA
TACTGTAAAGAACAAGCTCTTTTGGTCCCACGTCCCCACGCCGTTCGATCATCAACCCCT
AATATCCAACGGCTCAGAGATCTTTTCATTTCGACTCGAGCCATGGCTGAGTCTAAGCGA
TTGATTGAACGAAACGACTTAACCGGCGCGCACCACATGTTATCCTCTGCTCGTGCTTTG
TTAGTTCAGTCAAATTCCAGCTCAGCTGGTGAATTCGTTCATGGCTTAGAAACCGAGCTG
TCTGAGCTTCATTACAGAAGGCAAAATCAAACTCAGCAGCCACATCGACGAAGAATAAAC
GTACAACAAAGAGAAGATGATAAAGCTGAGCCGCTTACACCTACATCGGCTTGGAGAGCC
GCTGAACGGCTAGCTAAAGTGGCTATAATGAGAAAATCGTTGAATAGAGTCAGTGATTTA
CACGGCTTCGAAGATGCAAGATTTTAG