Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078675
CDS Infomation

pacid=37428481 polypeptide=PGSC0003DMP400053318 locus=PGSC0003DMG400030616 ID=PGSC0003DMT400078675.v4.03 annot-version=v4.03
Sequence

ATGGAGCTCACTCAACAAGATTTTTTAGAAGTAGTAGTTTCTCCAAGGATAGAAAGTTGG
AACAACACTTTTGCAAATGCATGGAACATTGAATCACCAACTTTTTATCAACAAAATCCT
GAATTTGTACCCTCAAATTCTTCCCTTTTAGACCTCATCATGTCTCCTTCACAATCCAAT
TATTTTCCATGTCCTGATTTTCAAGAATCATCATACCCTTTTCTTCATTCTTTCAATAGT
ACTACTACTGCCCCACCTCAAGTAATTGATTCTTCTACTTATAATAATAATACTAATATT
CAAGAAAGATCCATTATAGAGGAAGGGCAAATTGGTCATTTTTCTACTGATTTTCATGGG
CATTATGAAGACACATTTAGTTGTTACAATATTAACAAAGTGGTCAAAATGGAAGAAGCA
ACTTCAAGAATTGTGGGAGAAAAAAAGAGTAAAAATTATAAAGTGAAGAAATTAGAAGGA
CAGCCTTCTAAGAATCTTATGGCAGAAAGGAGAAGAAGGAAAAGACTCAATGACAGACTC
TCTATGCTTAGATCTATTGTACCCAAAATAAGCAAGATGGATAGAACATCTATACTTGGA
GATACAATTGATTATGTGAAGGAGCTCTTAGATAAAATCAACAGATTGCATGAAGAAAAT
GAAATGGAAGATGAAATTAAGGACATAAAATTTCTGGGAAATTTCAAGGGATTAAAGCCT
AATGAAGCACTTGTAAGAAATCCTCCAAAGTTTGATGTAGAAAGGAGAAATGAGGATGAG
ACGAGCATAGAGATATGCTGCGGAACGAAGCCAGGTTTACTTTTATCAACAGTACACACA
ATGGAAGCATTAGGGCTTGAGGTGCAACAATGTGTTGTCAGCTGTTTCAGTGACTTCTCA
ATGAGAGCTTCTTGTTCTGAGGAAGTGGAGCATCGAAATTTTTTGAGTTCTGAAGACGTG
AAGCAAGCTCTGTTCAAAACTGCAGGTTATGGAGGAAGATGTCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400053318
PEP Infomation

pacid=37428481 transcript=PGSC0003DMT400078675 locus=PGSC0003DMG400030616 ID=PGSC0003DMT400078675.v4.03 annot-version=v4.03
Sequence

MELTQQDFLEVVVSPRIESWNNTFANAWNIESPTFYQQNPEFVPSNSSLLDLIMSPSQSN
YFPCPDFQESSYPFLHSFNSTTTAPPQVIDSSTYNNNTNIQERSIIEEGQIGHFSTDFHG
HYEDTFSCYNINKVVKMEEATSRIVGEKKSKNYKVKKLEGQPSKNLMAERRRRKRLNDRL
SMLRSIVPKISKMDRTSILGDTIDYVKELLDKINRLHEENEMEDEIKDIKFLGNFKGLKP
NEALVRNPPKFDVERRNEDETSIEICCGTKPGLLLSTVHTMEALGLEVQQCVVSCFSDFS
MRASCSEEVEHRNFLSSEDVKQALFKTAGYGGRCL*

Transcript Sequence

Transcript ID

PGSC0003DMT400078675
Transcript Infomation

pacid=37428481 locus=PGSC0003DMG400030616 ID=PGSC0003DMT400078675.v4.03 annot-version=v4.03
Sequence

ATGGAGCTCACTCAACAAGATTTTTTAGAAGTAGTAGTTTCTCCAAGGATAGAAAGTTGG
AACAACACTTTTGCAAATGCATGGAACATTGAATCACCAACTTTTTATCAACAAAATCCT
GAATTTGTACCCTCAAATTCTTCCCTTTTAGACCTCATCATGTCTCCTTCACAATCCAAT
TATTTTCCATGTCCTGATTTTCAAGAATCATCATACCCTTTTCTTCATTCTTTCAATAGT
ACTACTACTGCCCCACCTCAAGTAATTGATTCTTCTACTTATAATAATAATACTAATATT
CAAGAAAGATCCATTATAGAGGAAGGGCAAATTGGTCATTTTTCTACTGATTTTCATGGG
CATTATGAAGACACATTTAGTTGTTACAATATTAACAAAGTGGTCAAAATGGAAGAAGCA
ACTTCAAGAATTGTGGGAGAAAAAAAGAGTAAAAATTATAAAGTGAAGAAATTAGAAGGA
CAGCCTTCTAAGAATCTTATGGCAGAAAGGAGAAGAAGGAAAAGACTCAATGACAGACTC
TCTATGCTTAGATCTATTGTACCCAAAATAAGCAAGATGGATAGAACATCTATACTTGGA
GATACAATTGATTATGTGAAGGAGCTCTTAGATAAAATCAACAGATTGCATGAAGAAAAT
GAAATGGAAGATGAAATTAAGGACATAAAATTTCTGGGAAATTTCAAGGGATTAAAGCCT
AATGAAGCACTTGTAAGAAATCCTCCAAAGTTTGATGTAGAAAGGAGAAATGAGGATGAG
ACGAGCATAGAGATATGCTGCGGAACGAAGCCAGGTTTACTTTTATCAACAGTACACACA
ATGGAAGCATTAGGGCTTGAGGTGCAACAATGTGTTGTCAGCTGTTTCAGTGACTTCTCA
ATGAGAGCTTCTTGTTCTGAGGAAGTGGAGCATCGAAATTTTTTGAGTTCTGAAGACGTG
AAGCAAGCTCTGTTCAAAACTGCAGGTTATGGAGGAAGATGTCTATGA