Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078666
CDS Infomation

pacid=37427704 polypeptide=PGSC0003DMP400053311 locus=PGSC0003DMG400030612 ID=PGSC0003DMT400078666.v4.03 annot-version=v4.03
Sequence

ATGGCTATGGCAATAGCTCTTCGGAGGCTTTCCGCTACAGTTGACAAACCGGTTAAGAGT
CTCTACAATGGTGGCTCTCTCTATTACATGTCATCACTGCCTAATGAAGCTGTATACGAC
AAAGAAAAATCTGGGGTAGCTTGGCCAAAGCAACTGAATGCTCCACTAGAGGTTGTTGAT
CCTGAGATTGCTGACATTATTGAGCATGAGAAAGCACGCCAATGGAAGGGGCTCGAACTC
ATTCCATCAGAAAATTTCACTTCTGTTTCGGTGATGCAAGCAGTTGGATCAGTCATGACT
AACAAGTACAGTGAAGGATATCCTGGTGCCAGATACTATGGGGGAAATGAGTACATAGAC
ATGGCAGAAACCTTATGCCAGAAACGTGCTTTGGAAGCATTCAGGTTGGATCCTGCAAAA
TGGGGAGTGAATGTGCAGCCTCTATCAGGATCACCCGCTAATTTTCAAGTTTACACTGCA
TTATTAAAACCTCATGAGAGAATCATGGCTCTTGATCTTCCTCATGGTGGACATCTTTCT
CATGGATATCAGACTGATACAAAGAAGATATCTGCAGTCTCTATATTCTTTGAGACAATG
CCATACAGACTCGATGAGAGCACTGGCTATATTGACTATGACCAGCTCGAGAAAAGTGCC
ACACTCTTTCGGCCAAAATTGATTGTTGCTGGTGCTAGTGCCTACGCACGTCTTTATGAC
TATGACAGAATCCGAAAGGTTTGCAACAAACAGAAAGCTATTTTGTTAGCAGATATGGCA
CACATTAGTGGATTGGTTGCAGCTGGAGTTATCCCATCACCATTTGATTATGCTGATGTT
GTCACTACCACAACCCACAAGTCCCTTCGTGGCCCTCGTGGTGCTATGATTTTTTACAGG
AAGGGTGTTAAAGAGGTTAACAAGCAAGGCAAGGAGGTTTTCTACGACTATGAAGACAAA
ATTAACCAGGCAGTCTTTCCTGGACTTCAAGGTGGTCCCCACAATCACACCATCACTGGC
TTGGCAGTTGCCTTGAAACAGGCCACTACTCCAGAATACAGAGCTTACCAAGAGCAAGTT
CTCAGCAACTCCTCAAAATTTGCCCAGGCTTTAGGGGAGAAGGGCTATGAACTTGTCTCT
GGAGGAACCGATAATCACTTGGTTTTGGTGAACATGAAAAACAAGGGTATTGATGGTTCC
AGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGA
GATGTATCTGCCATGGTCCCTGGTGGCATCAGAATGGGAACTCCTGCACTCACTTCTCGG
GGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATA
GCAGTGAAAGTAAAGGCTGAAACTCAAGGGACAAAGTTGAAAGACTTTGTAGCAACACTA
GAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCATGATGTGGAGGAGTAT
GCTAAGCAGTTCCCTACAATTGGGTTTGAGAAAGAAACCATGAAGTACAAAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053311
PEP Infomation

pacid=37427704 transcript=PGSC0003DMT400078666 locus=PGSC0003DMG400030612 ID=PGSC0003DMT400078666.v4.03 annot-version=v4.03
Sequence

MAMAIALRRLSATVDKPVKSLYNGGSLYYMSSLPNEAVYDKEKSGVAWPKQLNAPLEVVD
PEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID
MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLS
HGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYD
YDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYR
KGVKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV
LSNSSKFAQALGEKGYELVSGGTDNHLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPG
DVSAMVPGGIRMGTPALTSRGFLEEDFVKVADFFDAAVKIAVKVKAETQGTKLKDFVATL
ESSAPIKSEIAKLRHDVEEYAKQFPTIGFEKETMKYKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400078666
Transcript Infomation

pacid=37427704 locus=PGSC0003DMG400030612 ID=PGSC0003DMT400078666.v4.03 annot-version=v4.03
Sequence

ATGGCTATGGCAATAGCTCTTCGGAGGCTTTCCGCTACAGTTGACAAACCGGTTAAGAGT
CTCTACAATGGTGGCTCTCTCTATTACATGTCATCACTGCCTAATGAAGCTGTATACGAC
AAAGAAAAATCTGGGGTAGCTTGGCCAAAGCAACTGAATGCTCCACTAGAGGTTGTTGAT
CCTGAGATTGCTGACATTATTGAGCATGAGAAAGCACGCCAATGGAAGGGGCTCGAACTC
ATTCCATCAGAAAATTTCACTTCTGTTTCGGTGATGCAAGCAGTTGGATCAGTCATGACT
AACAAGTACAGTGAAGGATATCCTGGTGCCAGATACTATGGGGGAAATGAGTACATAGAC
ATGGCAGAAACCTTATGCCAGAAACGTGCTTTGGAAGCATTCAGGTTGGATCCTGCAAAA
TGGGGAGTGAATGTGCAGCCTCTATCAGGATCACCCGCTAATTTTCAAGTTTACACTGCA
TTATTAAAACCTCATGAGAGAATCATGGCTCTTGATCTTCCTCATGGTGGACATCTTTCT
CATGGATATCAGACTGATACAAAGAAGATATCTGCAGTCTCTATATTCTTTGAGACAATG
CCATACAGACTCGATGAGAGCACTGGCTATATTGACTATGACCAGCTCGAGAAAAGTGCC
ACACTCTTTCGGCCAAAATTGATTGTTGCTGGTGCTAGTGCCTACGCACGTCTTTATGAC
TATGACAGAATCCGAAAGGTTTGCAACAAACAGAAAGCTATTTTGTTAGCAGATATGGCA
CACATTAGTGGATTGGTTGCAGCTGGAGTTATCCCATCACCATTTGATTATGCTGATGTT
GTCACTACCACAACCCACAAGTCCCTTCGTGGCCCTCGTGGTGCTATGATTTTTTACAGG
AAGGGTGTTAAAGAGGTTAACAAGCAAGGCAAGGAGGTTTTCTACGACTATGAAGACAAA
ATTAACCAGGCAGTCTTTCCTGGACTTCAAGGTGGTCCCCACAATCACACCATCACTGGC
TTGGCAGTTGCCTTGAAACAGGCCACTACTCCAGAATACAGAGCTTACCAAGAGCAAGTT
CTCAGCAACTCCTCAAAATTTGCCCAGGCTTTAGGGGAGAAGGGCTATGAACTTGTCTCT
GGAGGAACCGATAATCACTTGGTTTTGGTGAACATGAAAAACAAGGGTATTGATGGTTCC
AGGGTTGAAAAAGTCTTGGAAGCTGTACATATTGCAGCCAACAAGAACACCGTTCCTGGA
GATGTATCTGCCATGGTCCCTGGTGGCATCAGAATGGGAACTCCTGCACTCACTTCTCGG
GGATTTCTTGAGGAAGATTTTGTTAAAGTTGCTGATTTCTTTGATGCTGCTGTGAAGATA
GCAGTGAAAGTAAAGGCTGAAACTCAAGGGACAAAGTTGAAAGACTTTGTAGCAACACTA
GAATCCAGTGCTCCAATCAAGTCTGAAATTGCAAAACTCCGTCATGATGTGGAGGAGTAT
GCTAAGCAGTTCCCTACAATTGGGTTTGAGAAAGAAACCATGAAGTACAAAAACTAA