Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078553
CDS Infomation

pacid=37442890 polypeptide=PGSC0003DMP400053238 locus=PGSC0003DMG400030577 ID=PGSC0003DMT400078553.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTTCTTCTTCTTTACAATTCACTGCAACACCTTTTAACCAATTTCATTCAAAA
CAAGTACCCAAACACGCCACTAAATGGGGTACTATTCGCTGTTCCGCTGCTTCACCCAGC
AAAAGCTACAACATTACTCTTCTTCCCGGCGATGGTATTGGCCCTGAAGTCATTTCTGTT
GCCAAAAATGCCCTCCAACTTGTCGCCTCCATCGAAGGATTTGAAGTTGCATTCGAAGAG
ATGCCTATGGGAGGGGCTGCATTGGATGCTGTAGGAGTACCATTGCCTGCTGAGACTCTT
AATTCTGCAAAGAGATCTGATGCTACTCTTCTTGGAGCAATTGGAGGATATAAATGGGAC
AAAAATGAAAAACATTTGAAGCCCGAGACTGGATTGCTTCAACTTCGAGAAGGCTTGCAG
GTCTTTGCTAACTTGAGACCAGCCACTGTTTTACCACAGTTAGTAGATGCTTCAACTTTG
AAAAAAGAAGTTGCTGAAGGTGTAGACCTAATGGTTGTTAGGGAACTTACAGGAGGTATT
TATTTTGGCAAACCAAGAGGATTCAGCACTAATGAAAATGGTCAGGAAATAGGTTTCAAC
ACTGAAGTGTATGCAGCATATGAGATCGACAGAATTGCTCGTATTGCATTTGAAACTGCA
AGGAAGCGTAGAGGAAAACTATGTAGCGTGGATAAAGCAAATGTTTTGGAGGCCTCTATG
CTTTGGAGGAAGATAGTTACAGCGTTAGCCTCAGAGTATCCTGATGTAGAGCTCTCTCAC
ATGTATGTTGATAATGCAGCTATGCAACTTGTTCGCAACCCAAAACAGTTTGATACAATT
GTGACAAACAACATATTTGGTGACATCCTGTCCGATGAAGCATCAATGATTACAGGAAGT
ATCGGGATGCTTCCATCAGCCAGTCTTGGTGCAGCGGGACCTGGATTGTTTGAACCTATA
CATGGTTCTGCTCCTGATATTGCTGGGCAGGATAAAGCAAACCCTTTGGCAACAATGCTC
AGTGCTGCTATGCTTCTGAAGTATGGCCTAGGTGAGGAGAAGGCTGCTCAGAGAATTGAA
GCAGCTGTTTTAGACGCCTTAAATCGAGGATTCCGTACTGGTGACATTCACTCAGCAGGA
CATAAATTGGTCGGATGCAAGGAAATGGGTGAAGAAGTGCTCAAGTCTATCGACAGCAAA
ACTCCTGCTGCTGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053238
PEP Infomation

pacid=37442890 transcript=PGSC0003DMT400078553 locus=PGSC0003DMG400030577 ID=PGSC0003DMT400078553.v4.03 annot-version=v4.03
Sequence

MAASSSLQFTATPFNQFHSKQVPKHATKWGTIRCSAASPSKSYNITLLPGDGIGPEVISV
AKNALQLVASIEGFEVAFEEMPMGGAALDAVGVPLPAETLNSAKRSDATLLGAIGGYKWD
KNEKHLKPETGLLQLREGLQVFANLRPATVLPQLVDASTLKKEVAEGVDLMVVRELTGGI
YFGKPRGFSTNENGQEIGFNTEVYAAYEIDRIARIAFETARKRRGKLCSVDKANVLEASM
LWRKIVTALASEYPDVELSHMYVDNAAMQLVRNPKQFDTIVTNNIFGDILSDEASMITGS
IGMLPSASLGAAGPGLFEPIHGSAPDIAGQDKANPLATMLSAAMLLKYGLGEEKAAQRIE
AAVLDALNRGFRTGDIHSAGHKLVGCKEMGEEVLKSIDSKTPAAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400078553
Transcript Infomation

pacid=37442890 locus=PGSC0003DMG400030577 ID=PGSC0003DMT400078553.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTTCTTCTTCTTTACAATTCACTGCAACACCTTTTAACCAATTTCATTCAAAA
CAAGTACCCAAACACGCCACTAAATGGGGTACTATTCGCTGTTCCGCTGCTTCACCCAGC
AAAAGCTACAACATTACTCTTCTTCCCGGCGATGGTATTGGCCCTGAAGTCATTTCTGTT
GCCAAAAATGCCCTCCAACTTGTCGCCTCCATCGAAGGATTTGAAGTTGCATTCGAAGAG
ATGCCTATGGGAGGGGCTGCATTGGATGCTGTAGGAGTACCATTGCCTGCTGAGACTCTT
AATTCTGCAAAGAGATCTGATGCTACTCTTCTTGGAGCAATTGGAGGATATAAATGGGAC
AAAAATGAAAAACATTTGAAGCCCGAGACTGGATTGCTTCAACTTCGAGAAGGCTTGCAG
GTCTTTGCTAACTTGAGACCAGCCACTGTTTTACCACAGTTAGTAGATGCTTCAACTTTG
AAAAAAGAAGTTGCTGAAGGTGTAGACCTAATGGTTGTTAGGGAACTTACAGGAGGTATT
TATTTTGGCAAACCAAGAGGATTCAGCACTAATGAAAATGGTCAGGAAATAGGTTTCAAC
ACTGAAGTGTATGCAGCATATGAGATCGACAGAATTGCTCGTATTGCATTTGAAACTGCA
AGGAAGCGTAGAGGAAAACTATGTAGCGTGGATAAAGCAAATGTTTTGGAGGCCTCTATG
CTTTGGAGGAAGATAGTTACAGCGTTAGCCTCAGAGTATCCTGATGTAGAGCTCTCTCAC
ATGTATGTTGATAATGCAGCTATGCAACTTGTTCGCAACCCAAAACAGTTTGATACAATT
GTGACAAACAACATATTTGGTGACATCCTGTCCGATGAAGCATCAATGATTACAGGAAGT
ATCGGGATGCTTCCATCAGCCAGTCTTGGTGCAGCGGGACCTGGATTGTTTGAACCTATA
CATGGTTCTGCTCCTGATATTGCTGGGCAGGATAAAGCAAACCCTTTGGCAACAATGCTC
AGTGCTGCTATGCTTCTGAAGTATGGCCTAGGTGAGGAGAAGGCTGCTCAGAGAATTGAA
GCAGCTGTTTTAGACGCCTTAAATCGAGGATTCCGTACTGGTGACATTCACTCAGCAGGA
CATAAATTGGTCGGATGCAAGGAAATGGGTGAAGAAGTGCTCAAGTCTATCGACAGCAAA
ACTCCTGCTGCTGTTTAA