Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078506
CDS Infomation

pacid=37445290 polypeptide=PGSC0003DMP400053196 locus=PGSC0003DMG400030559 ID=PGSC0003DMT400078506.v4.03 annot-version=v4.03
Sequence

ATGTCAATCCTTTCTCTCTCCCTTTCTCCATTTCCAAATCCATCTCTCTCCCATCTCAGT
TCCCATGCTCCCTCCCGTATCCAATCACTCCACCCTTCTTCATCCATGAGCCTCCTCAAA
CCGCTCCACCACCATCTCCGTCGCCGTCTCTCCATCTCCGCCGCCGCAGCCGTCCGTCAA
GACACTAATCTCTGGACAACCGCACCTCTCGTCACCGTTTCACCTGCCGCTGAATCTCTC
TTCCACGTCACCATCGACGTGTCCGATTACCCTGACCTAGCTACCTCACACACCAAGGCA
GGTCAGTATCTTCAGCTTCGGATTCCTGACGTTGAGAAACCGTCGTTTTTAGCGATTGCA
TCGCCGCCTTCGCTTGCTGCAGCAAAAGGTTTATTTGAGTTCCTTGTGAAAAGTATCTCT
GGCTCTACGGCGGAGCTACTATGTGGATTGCAGAAAGGTGATGTTGTGGAGCTGAGTCAG
GTTATGGGGAAAGGATTTGATTTGGATCAAATCTCTCCTGCGGAAGAGTGTCAGACGGTC
GTGATTTTCGCTACGGGATCTGGAATCAGCCCAATTAGATCCCTGATTGAGGCAGGGTTT
GGTGCAGACAAGAGATCTGATGTTCGGCTATATTATGGTGCACGTAATTTGAAGAGAATG
GCATATCAGGATAGGTTTGAAAACTGGGCATCCTCTGGGGTTAAGGTTGTGCCAGTGTTG
TCTCAGCCTGATGATGCTTGGACAGGTGAAGATGGCTATGTTCAGGCAGCATTTGCCCGA
GCTAAAAACATTTTTAATCCTCAATCCACTGGAGCAGTCCTCTGTGGTCAAAAGCAAATG
GCTGAGGAGGTGACTTCTCTTCTTGTAGCAGATGGAGTCTCAACCGAGAAGATTCTGAAG
AACTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400053196
PEP Infomation

pacid=37445290 transcript=PGSC0003DMT400078506 locus=PGSC0003DMG400030559 ID=PGSC0003DMT400078506.v4.03 annot-version=v4.03
Sequence

MSILSLSLSPFPNPSLSHLSSHAPSRIQSLHPSSSMSLLKPLHHHLRRRLSISAAAAVRQ
DTNLWTTAPLVTVSPAAESLFHVTIDVSDYPDLATSHTKAGQYLQLRIPDVEKPSFLAIA
SPPSLAAAKGLFEFLVKSISGSTAELLCGLQKGDVVELSQVMGKGFDLDQISPAEECQTV
VIFATGSGISPIRSLIEAGFGADKRSDVRLYYGARNLKRMAYQDRFENWASSGVKVVPVL
SQPDDAWTGEDGYVQAAFARAKNIFNPQSTGAVLCGQKQMAEEVTSLLVADGVSTEKILK
NF*

Transcript Sequence

Transcript ID

PGSC0003DMT400078506
Transcript Infomation

pacid=37445290 locus=PGSC0003DMG400030559 ID=PGSC0003DMT400078506.v4.03 annot-version=v4.03
Sequence

ATGTCAATCCTTTCTCTCTCCCTTTCTCCATTTCCAAATCCATCTCTCTCCCATCTCAGT
TCCCATGCTCCCTCCCGTATCCAATCACTCCACCCTTCTTCATCCATGAGCCTCCTCAAA
CCGCTCCACCACCATCTCCGTCGCCGTCTCTCCATCTCCGCCGCCGCAGCCGTCCGTCAA
GACACTAATCTCTGGACAACCGCACCTCTCGTCACCGTTTCACCTGCCGCTGAATCTCTC
TTCCACGTCACCATCGACGTGTCCGATTACCCTGACCTAGCTACCTCACACACCAAGGCA
GGTCAGTATCTTCAGCTTCGGATTCCTGACGTTGAGAAACCGTCGTTTTTAGCGATTGCA
TCGCCGCCTTCGCTTGCTGCAGCAAAAGGTTTATTTGAGTTCCTTGTGAAAAGTATCTCT
GGCTCTACGGCGGAGCTACTATGTGGATTGCAGAAAGGTGATGTTGTGGAGCTGAGTCAG
GTTATGGGGAAAGGATTTGATTTGGATCAAATCTCTCCTGCGGAAGAGTGTCAGACGGTC
GTGATTTTCGCTACGGGATCTGGAATCAGCCCAATTAGATCCCTGATTGAGGCAGGGTTT
GGTGCAGACAAGAGATCTGATGTTCGGCTATATTATGGTGCACGTAATTTGAAGAGAATG
GCATATCAGGATAGGTTTGAAAACTGGGCATCCTCTGGGGTTAAGGTTGTGCCAGTGTTG
TCTCAGCCTGATGATGCTTGGACAGGTGAAGATGGCTATGTTCAGGCAGCATTTGCCCGA
GCTAAAAACATTTTTAATCCTCAATCCACTGGAGCAGTCCTCTGTGGTCAAAAGCAAATG
GCTGAGGAGGTGACTTCTCTTCTTGTAGCAGATGGAGTCTCAACCGAGAAGATTCTGAAG
AACTTCTAA