Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078504
CDS Infomation

pacid=37444949 polypeptide=PGSC0003DMP400053195 locus=PGSC0003DMG400030558 ID=PGSC0003DMT400078504.v4.03 annot-version=v4.03
Sequence

ATGGCGTCACCGTCGTCGTCGGCCAACGTCATGCTGGCGATCTTCGAGAAGAAAACCGTA
TCACTCGATCTCTATCGTCCATTACGAAACTACATCGTTTTCAACTACTCCGAACGCGAA
GCTCAAAACCTCGAAGATGATCTCCAAACTATCAAACAGTATCGTTCCGAAATCGAACGT
GTTCCCGCCGATTCGCTACCTGCTCGCCGTGACATGTTACAAAATTACTATAAAGCCCTC
TGCGCTGTTGAATCTCGCTTCCCTATATCACCTGATAATGATCACATCAATTCTGTGTAT
TTTACTTGGTACGATACTTTCAAGATCAAGCAGAAAGCTGTGCAGCAGAACATTCATCTA
GAGAAAGCTGCAGTTTTGTTTAATCTAGGGGCAGTGCACAGTCAGATGGGATTGAGTTTG
GATCGATCTGCAGTGGAGGGTCGAAGGCAGGCATCACATTCCTTTATAGCTGCAGCTGGG
GCATTCGCCTTCCTGAGAGACAATGTGGCAATGAAGGCATCAATGGGTACCTCCACTACG
GTTGACATGTCGGTGGAATGTGCTGGGATGTTGGAAAGACTCATGCTAGCGCAGGCTCAG
GAGTGTGTTTTTGAGAATACTATTGCCAAGGGAAGCACACCTGGAGTCTGTGCAAAGATT
TCAAGACAGGTAGGGATTTATTATGAGGAAGCCTTGGCAGCATTAAATGTTGCACCTTTA
ACCTACCACTTTGACAAGGGTTGGCTGGCTCATGTTCAGCTAAAGGCTGCCTTATTTTAT
GCTGAGGCCTGCTATAGGTACGGTATGGAGCTCCATGAGAAAGAAGAAATTGCAGAGGAA
ATTGCGAGGTTGAAGAGTGGGATTAGTGCATTGTCAGAGGCCAAAAAAACATCATCAAAA
GGAGCAGCACAGCAGCTCTTGGATGCAATTAATAAGCTAGATGCTAATTTAAATCAAAAC
TTGGCGAGAGCTGTGAAGGAGAATGATAGAGTATACCTCATGAGAGTTCCACAAGCCAGT
TCTCTGCCTCCTCTTCCTGCATTTGCAATGGTCAAACCTATGCCAATGAATGATGTTCTG
GACGCAAGCAAGGAGAAGATGTTTGCCAGTCTTGTTCCTGATAACAGTGCTAAAGCTCTG
TCCAGGTACACCGAAATGGTTGATGACGTCATTCGGGCTCAAGCTGAGAGATTGCAACAG
GGAAGTGAGCTAGCTCGAGTAAAGCTAAAGGAAATGGACTTGCCTGATTCTATTCTTGCA
TTGGAGGGAAACTTAACTCTACCCATGGCCTTAAAAGAAGATGTAGATGCAGTTCAAATT
TGTGGTGGTCCAGCTGGTTTAGAAGCTGAGCTACAGCAACTCAATGATCTGAAGAGGGTG
AACCAGGAATTACTGATCCAAACTGAGGAGCTTTTGCAAAAAGAAGCAACAGAAGATGCT
CAATTTAGAAGTCAATTTGGAACACGATGGACAAGACCTCAATCTAGTACTCTTACAAAG
AACCTACAGGATAGGTTAAACAGGTTTGCAGGTAACTTGAAGCAAGCTGCAGAGAGTGAT
ACCAGGATTGAACGATCAGTGAGGGATCATGCAGCACTAATGTCGATCCTTGACCGCCGT
CCAATTGAATCTGCTCTTCCAACCTTGGCAAGACCAATCATGTCATTGGATGCCAATGAA
GATGCAATTGCGGGTGCTCTGAAGCAGAGCTTGGTAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400053195
PEP Infomation

pacid=37444949 transcript=PGSC0003DMT400078504 locus=PGSC0003DMG400030558 ID=PGSC0003DMT400078504.v4.03 annot-version=v4.03
Sequence

MASPSSSANVMLAIFEKKTVSLDLYRPLRNYIVFNYSEREAQNLEDDLQTIKQYRSEIER
VPADSLPARRDMLQNYYKALCAVESRFPISPDNDHINSVYFTWYDTFKIKQKAVQQNIHL
EKAAVLFNLGAVHSQMGLSLDRSAVEGRRQASHSFIAAAGAFAFLRDNVAMKASMGTSTT
VDMSVECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPL
TYHFDKGWLAHVQLKAALFYAEACYRYGMELHEKEEIAEEIARLKSGISALSEAKKTSSK
GAAQQLLDAINKLDANLNQNLARAVKENDRVYLMRVPQASSLPPLPAFAMVKPMPMNDVL
DASKEKMFASLVPDNSAKALSRYTEMVDDVIRAQAERLQQGSELARVKLKEMDLPDSILA
LEGNLTLPMALKEDVDAVQICGGPAGLEAELQQLNDLKRVNQELLIQTEELLQKEATEDA
QFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDTRIERSVRDHAALMSILDRR
PIESALPTLARPIMSLDANEDAIAGALKQSLVR*

Transcript Sequence

Transcript ID

PGSC0003DMT400078504
Transcript Infomation

pacid=37444949 locus=PGSC0003DMG400030558 ID=PGSC0003DMT400078504.v4.03 annot-version=v4.03
Sequence

ATGGCGTCACCGTCGTCGTCGGCCAACGTCATGCTGGCGATCTTCGAGAAGAAAACCGTA
TCACTCGATCTCTATCGTCCATTACGAAACTACATCGTTTTCAACTACTCCGAACGCGAA
GCTCAAAACCTCGAAGATGATCTCCAAACTATCAAACAGTATCGTTCCGAAATCGAACGT
GTTCCCGCCGATTCGCTACCTGCTCGCCGTGACATGTTACAAAATTACTATAAAGCCCTC
TGCGCTGTTGAATCTCGCTTCCCTATATCACCTGATAATGATCACATCAATTCTGTGTAT
TTTACTTGGTACGATACTTTCAAGATCAAGCAGAAAGCTGTGCAGCAGAACATTCATCTA
GAGAAAGCTGCAGTTTTGTTTAATCTAGGGGCAGTGCACAGTCAGATGGGATTGAGTTTG
GATCGATCTGCAGTGGAGGGTCGAAGGCAGGCATCACATTCCTTTATAGCTGCAGCTGGG
GCATTCGCCTTCCTGAGAGACAATGTGGCAATGAAGGCATCAATGGGTACCTCCACTACG
GTTGACATGTCGGTGGAATGTGCTGGGATGTTGGAAAGACTCATGCTAGCGCAGGCTCAG
GAGTGTGTTTTTGAGAATACTATTGCCAAGGGAAGCACACCTGGAGTCTGTGCAAAGATT
TCAAGACAGGTAGGGATTTATTATGAGGAAGCCTTGGCAGCATTAAATGTTGCACCTTTA
ACCTACCACTTTGACAAGGGTTGGCTGGCTCATGTTCAGCTAAAGGCTGCCTTATTTTAT
GCTGAGGCCTGCTATAGGTACGGTATGGAGCTCCATGAGAAAGAAGAAATTGCAGAGGAA
ATTGCGAGGTTGAAGAGTGGGATTAGTGCATTGTCAGAGGCCAAAAAAACATCATCAAAA
GGAGCAGCACAGCAGCTCTTGGATGCAATTAATAAGCTAGATGCTAATTTAAATCAAAAC
TTGGCGAGAGCTGTGAAGGAGAATGATAGAGTATACCTCATGAGAGTTCCACAAGCCAGT
TCTCTGCCTCCTCTTCCTGCATTTGCAATGGTCAAACCTATGCCAATGAATGATGTTCTG
GACGCAAGCAAGGAGAAGATGTTTGCCAGTCTTGTTCCTGATAACAGTGCTAAAGCTCTG
TCCAGGTACACCGAAATGGTTGATGACGTCATTCGGGCTCAAGCTGAGAGATTGCAACAG
GGAAGTGAGCTAGCTCGAGTAAAGCTAAAGGAAATGGACTTGCCTGATTCTATTCTTGCA
TTGGAGGGAAACTTAACTCTACCCATGGCCTTAAAAGAAGATGTAGATGCAGTTCAAATT
TGTGGTGGTCCAGCTGGTTTAGAAGCTGAGCTACAGCAACTCAATGATCTGAAGAGGGTG
AACCAGGAATTACTGATCCAAACTGAGGAGCTTTTGCAAAAAGAAGCAACAGAAGATGCT
CAATTTAGAAGTCAATTTGGAACACGATGGACAAGACCTCAATCTAGTACTCTTACAAAG
AACCTACAGGATAGGTTAAACAGGTTTGCAGGTAACTTGAAGCAAGCTGCAGAGAGTGAT
ACCAGGATTGAACGATCAGTGAGGGATCATGCAGCACTAATGTCGATCCTTGACCGCCGT
CCAATTGAATCTGCTCTTCCAACCTTGGCAAGACCAATCATGTCATTGGATGCCAATGAA
GATGCAATTGCGGGTGCTCTGAAGCAGAGCTTGGTAAGATGA