Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078473
CDS Infomation

pacid=37441963 polypeptide=PGSC0003DMP400053168 locus=PGSC0003DMG400030547 ID=PGSC0003DMT400078473.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCGGAGAAGCCACCGCCGTTGCCGGAGACCACCCTATTGCCATCCCACTCCGG
CTACTCCATGAGGTGTCACAGATCTCAACTGCCGGATTTTGTGGTAAATTCAAGAAAGAT
TGTACAGATTTAGCAAGAAGAGTTACACTTTTGGCTCATTTGTTTGATGAGTTAAAAGAC
TCAAATACCCTTTTGGGTTCTTCATCTTCTTCATTCAATTCTTGCTTTTCTGATCTCTCA
GTTGCTCTTCAAGCTGCAAAACAACTACTTTTAGCAGCTAATGAACTTGATCCCAAGATC
CACTCTGATGTCGCGGTAAAGAAAATAAACTTTCGGTTTCAATGTATTACATGGAAATTG
GAGAAAGCCCTTGGTAACTTCCCATATGATCATTTTGACATATCAGAAGAAGTGCAAGAG
CAGGTTGAATTGGTCAGAGCACAGTTGAGACGAGCCACAGAAAAGTATGGTGGCCCTGTA
AAGTCAAACTTATTATCTCGAGCATCGTCACAACCACTGGATAAGGAGATTGATTTACTC
CATTCAGGAAATAGTGGAATTGGAACTTTACATATAGAAAATATTGGCAATATTGATCAT
GAAGTTAGGCCAAAAGTTGGACGTGTTCCTCGAGGTAGTGTTCGAAACGGAAGTTACTGC
AGTCAGATTGTTCAGGAGTCTGAAAGAATAGGAAATTCTTCCAAGTTGTCTGAGGTTGGT
GATCTAGAGATTTCCGGAGAAGATGACTCTCCATTTAAGAGTCACGAGGAGAGTAAAAAG
TCCAACTGTCCTGTAACTCCTACAGAGTTTATTTGCCCTATTTCCCTTGAGCTCATGAGG
GATCCTGTTATTGTAGCTGCCACAGGGCAGACTTATGAAAGATCGTACATACAACAATGG
ATAGATGGCGGCCACACAACATGCCCAAAAACTCAGCAACAACTCCACAATCTTACGCTT
ACCCCAAATTATGCTCTGAAAAATCTAATTAGTGATTGGTGTGCAAAGAATAATATACTA
CAGCCAACAGTATTTGCAAATGGGAAAATAAAGAAAAGTGATGGCTCATTTCGCTATGTT
ATTGGGGAAATAGGAGCTATGGAGGTCCTTGTCCGAAAGCTTTCAAGCAGGTCTGTGGAG
GATTGCAGGGCTGCAGTAGCTGAGATCCGTTCACTTTCCAAAAGAAGCACAGACAACAGA
ATTTTGATTGCTGAAGCTGGAGCGATTCCGGTCCTAGTTAAGTTGTTGACATCTGAAGAC
GGGCAAATCCAAGAAAATGCTGTCACCGCCGTTCTTAACCTTTCTATATTCGATGACAAC
AAAAGGATTATAATGCTTGCTGATGCCATTCCTTCTATCGTTCAAGTTCTCAGAGCAGGG
AGCATGGAGGCAAAAGAAAATGCAGCAGCAACCATTTTTAGTTTGTCGCTTGGAGATGAG
AATAAAATATTAATAGGTGCATCGGGAGCCATACCAGCTCTCATAGATTTGCTTCTGACA
GGAAATACCAGAGGAAAAAAAGACGCTGCATCAGCATTGTTTAATTTGTGTATATATCAA
GGAAACAAGGGTCGAGCTGTTCGTGCAGGGATTATACCAGCGCTGCTGGGAATGCTGACG
GATTCAAGCAGCTGCATGGTCGATGAACCTTTGACCATTCTTTCAGTCCTAGCTAACCAC
CAAGAGGCTAAGGAGGCCATAGCAAAAACTAGCACAATCCCAGTATTGATAGATCTTCTT
AGGACAGGTCTATCTCGTAGTAAAGAGAATGCAGCTGCCATCTTACTCTCCTTGTGCAAG
AGAGATTCCGAGAATCTTTCTTGCCTTTGTAGGCTCGGTGCAGTTATACCTCTTACAGAG
CTCACAAAGAGTGGCACGGAGAGGGCCAAGAGGAAGGCGACGTCACTGTTGGAGCATATT
AGAAAGTCTCAGCAACATAGCACGCGCAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053168
PEP Infomation

pacid=37441963 transcript=PGSC0003DMT400078473 locus=PGSC0003DMG400030547 ID=PGSC0003DMT400078473.v4.03 annot-version=v4.03
Sequence

MAGGEATAVAGDHPIAIPLRLLHEVSQISTAGFCGKFKKDCTDLARRVTLLAHLFDELKD
SNTLLGSSSSSFNSCFSDLSVALQAAKQLLLAANELDPKIHSDVAVKKINFRFQCITWKL
EKALGNFPYDHFDISEEVQEQVELVRAQLRRATEKYGGPVKSNLLSRASSQPLDKEIDLL
HSGNSGIGTLHIENIGNIDHEVRPKVGRVPRGSVRNGSYCSQIVQESERIGNSSKLSEVG
DLEISGEDDSPFKSHEESKKSNCPVTPTEFICPISLELMRDPVIVAATGQTYERSYIQQW
IDGGHTTCPKTQQQLHNLTLTPNYALKNLISDWCAKNNILQPTVFANGKIKKSDGSFRYV
IGEIGAMEVLVRKLSSRSVEDCRAAVAEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSED
GQIQENAVTAVLNLSIFDDNKRIIMLADAIPSIVQVLRAGSMEAKENAAATIFSLSLGDE
NKILIGASGAIPALIDLLLTGNTRGKKDAASALFNLCIYQGNKGRAVRAGIIPALLGMLT
DSSSCMVDEPLTILSVLANHQEAKEAIAKTSTIPVLIDLLRTGLSRSKENAAAILLSLCK
RDSENLSCLCRLGAVIPLTELTKSGTERAKRKATSLLEHIRKSQQHSTRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400078473
Transcript Infomation

pacid=37441963 locus=PGSC0003DMG400030547 ID=PGSC0003DMT400078473.v4.03 annot-version=v4.03
Sequence

ATGGCCGGCGGAGAAGCCACCGCCGTTGCCGGAGACCACCCTATTGCCATCCCACTCCGG
CTACTCCATGAGGTGTCACAGATCTCAACTGCCGGATTTTGTGGTAAATTCAAGAAAGAT
TGTACAGATTTAGCAAGAAGAGTTACACTTTTGGCTCATTTGTTTGATGAGTTAAAAGAC
TCAAATACCCTTTTGGGTTCTTCATCTTCTTCATTCAATTCTTGCTTTTCTGATCTCTCA
GTTGCTCTTCAAGCTGCAAAACAACTACTTTTAGCAGCTAATGAACTTGATCCCAAGATC
CACTCTGATGTCGCGGTAAAGAAAATAAACTTTCGGTTTCAATGTATTACATGGAAATTG
GAGAAAGCCCTTGGTAACTTCCCATATGATCATTTTGACATATCAGAAGAAGTGCAAGAG
CAGGTTGAATTGGTCAGAGCACAGTTGAGACGAGCCACAGAAAAGTATGGTGGCCCTGTA
AAGTCAAACTTATTATCTCGAGCATCGTCACAACCACTGGATAAGGAGATTGATTTACTC
CATTCAGGAAATAGTGGAATTGGAACTTTACATATAGAAAATATTGGCAATATTGATCAT
GAAGTTAGGCCAAAAGTTGGACGTGTTCCTCGAGGTAGTGTTCGAAACGGAAGTTACTGC
AGTCAGATTGTTCAGGAGTCTGAAAGAATAGGAAATTCTTCCAAGTTGTCTGAGGTTGGT
GATCTAGAGATTTCCGGAGAAGATGACTCTCCATTTAAGAGTCACGAGGAGAGTAAAAAG
TCCAACTGTCCTGTAACTCCTACAGAGTTTATTTGCCCTATTTCCCTTGAGCTCATGAGG
GATCCTGTTATTGTAGCTGCCACAGGGCAGACTTATGAAAGATCGTACATACAACAATGG
ATAGATGGCGGCCACACAACATGCCCAAAAACTCAGCAACAACTCCACAATCTTACGCTT
ACCCCAAATTATGCTCTGAAAAATCTAATTAGTGATTGGTGTGCAAAGAATAATATACTA
CAGCCAACAGTATTTGCAAATGGGAAAATAAAGAAAAGTGATGGCTCATTTCGCTATGTT
ATTGGGGAAATAGGAGCTATGGAGGTCCTTGTCCGAAAGCTTTCAAGCAGGTCTGTGGAG
GATTGCAGGGCTGCAGTAGCTGAGATCCGTTCACTTTCCAAAAGAAGCACAGACAACAGA
ATTTTGATTGCTGAAGCTGGAGCGATTCCGGTCCTAGTTAAGTTGTTGACATCTGAAGAC
GGGCAAATCCAAGAAAATGCTGTCACCGCCGTTCTTAACCTTTCTATATTCGATGACAAC
AAAAGGATTATAATGCTTGCTGATGCCATTCCTTCTATCGTTCAAGTTCTCAGAGCAGGG
AGCATGGAGGCAAAAGAAAATGCAGCAGCAACCATTTTTAGTTTGTCGCTTGGAGATGAG
AATAAAATATTAATAGGTGCATCGGGAGCCATACCAGCTCTCATAGATTTGCTTCTGACA
GGAAATACCAGAGGAAAAAAAGACGCTGCATCAGCATTGTTTAATTTGTGTATATATCAA
GGAAACAAGGGTCGAGCTGTTCGTGCAGGGATTATACCAGCGCTGCTGGGAATGCTGACG
GATTCAAGCAGCTGCATGGTCGATGAACCTTTGACCATTCTTTCAGTCCTAGCTAACCAC
CAAGAGGCTAAGGAGGCCATAGCAAAAACTAGCACAATCCCAGTATTGATAGATCTTCTT
AGGACAGGTCTATCTCGTAGTAAAGAGAATGCAGCTGCCATCTTACTCTCCTTGTGCAAG
AGAGATTCCGAGAATCTTTCTTGCCTTTGTAGGCTCGGTGCAGTTATACCTCTTACAGAG
CTCACAAAGAGTGGCACGGAGAGGGCCAAGAGGAAGGCGACGTCACTGTTGGAGCATATT
AGAAAGTCTCAGCAACATAGCACGCGCAATTAG