Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078451
CDS Infomation

pacid=37443028 polypeptide=PGSC0003DMP400053152 locus=PGSC0003DMG400030536 ID=PGSC0003DMT400078451.v4.03 annot-version=v4.03
Sequence

ATGGATATGTTCTCTTGTTTTTTCGTCTTCGTTTTGTTTCACTTTTGGTGCTTTGATTCA
GCTCAAGGACAGAACACATCCTACCCAAACTGCACTAAAGAATTCCAGTGTGGGAACTTA
AGAAATTTGAGTTTTCCTTTCTACAAATCCACTGAACTTGATTGTGGATTGTCCAAAGTT
GATTGTGATGTTAGTCCAAATCCTATTATTGAATTAGAAGGGGTGAAATATCAAGCTCTT
TTAAAAGCTGATGTTTTTATCAGACTTAAGGACACTAGTCTTGGAGAACTTTTGAAGAAG
AACAGTTGTGAGACTTTTGATAAAAATTTCTCGATCGCTATTTCTCCTTCAATAACATAT
AGATTTGATCCCTTACTCACTTTGTTCAAATGCAACAGAAACCAAAAGAGTAGAAATGAA
GAATTTTTCAACTCCAGCAGTTATCAAAGTTACAATGTCTGTGATAGTTTCATATTATAC
TATAACATCTCCATCCATTATTATCAAGTATCTGAAATTCCTAGTAGCTGTTCATTTATT
CAGTTGCCTTTGACATCAAATTCAGAAGCAAAAACAAATGGAAGTGGCTTATTTCATCTG
TTAACTGATGAAGTTATGCTAGGATGGACTGTGTCTGATGAGTGCAATCAGTGTTATTAT
ACCGGAGGAAGGTGTCAAACAGATAATGCTACTAATAGATTTCTTTGTTCTGATACCAAT
GGTGGTCATAAATTTGCGAAAGTGATTGTTGCAGTTTCAGTATTTATCGGTTCTGTTGTT
GGACTTTGTGCAATTGCCTGTGTTCTATGGTTTTACATGAGGAGGAGAAATGGTTCTTCA
CCATTTATTTCAAGAAATACATCTGGTATTTCAATGATTCATCACGAGCTCGAGGAACGT
TGTGAGTACCTAGGGATTCCTGTATTCTCCTATGAAGAACTTGAAGAAGCCACCAACAAA
TTCAGCTCTTCTAGAGAACTTGGTGATGGAGGTTATGGAACTGTGTACTATGGAAAACTT
AAAGATGGAAAAGAAGTTGCAGTTAAGAGACTTTATGAGAACAATCACAGACAAATGGAG
CAGTTTATCAACGAAATTGAAATTCTCACTCGCCTTAGGCATCCGAATCTTGTTACCCTT
TATGGATGTGCATCAAGACGTAGCCGTGAACTCTTCCTTGTTTATGAGTACATTCCTAAT
GGAACAATTGCTGATCACCTGAATGGACATAGAGCGAAGGATAAGTTACTAACATGGTCT
ATAAGGCTCAAAATCGCCATTGAAACTGCTAGCGCGTTGGCTTACCTTCATGCTTCTGAC
ATCATACACCGTGATGTCAAAACAAATAACATTCTCCTGGACAATAAGTTTTGTGTCAAA
GTAGCAGATTTCGGGCTGTCAAAATCCTTCCCTAATGATGTTACTCATATCTCAACCGCA
CCTCAGGGGACCCCGGGATATGTTGATCCTCAGTATCATGAATGTTACCACCTTACTGAT
AAGAGTGATGTTTATAGCTTTGGGGTTGTCCTTGTTGAGCTCATATCATCAAAGCAAGCT
GTAGATATGAACAGACATATGCACGAGATTAATTTGGCAAACTACGCGATGAACAGGATA
CTAAAATCCGCATTTGATGAGGTGATTGATCCATCTCTTGGATTCGAGACAGATGCTGAA
GTTAGGAGGATGACAACATCAGTGGCAGAACTAGCTTTCCAGTGCTTGCAAGTTGTCAAG
GACATGAGACCTACAATGGAAGAAGTACACGAAGCGTTGAAGCTTATCAAATACAGTGAA
TGGAAAAATTATCAGAAAAAGGATATCAATAGCTGCAATACCAAGACAAGAACTGTAAAA
GTTCATCGTCATCCTTCTGAAACGGATGATGCTGTGTTATTGAAGAAAAACATTCCAGCT
TCACCTGATACTGTGATTGATACATGGGCTAGTAGTTCCACTACAACTAGTACTGGAGGG
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400053152
PEP Infomation

pacid=37443028 transcript=PGSC0003DMT400078451 locus=PGSC0003DMG400030536 ID=PGSC0003DMT400078451.v4.03 annot-version=v4.03
Sequence

MDMFSCFFVFVLFHFWCFDSAQGQNTSYPNCTKEFQCGNLRNLSFPFYKSTELDCGLSKV
DCDVSPNPIIELEGVKYQALLKADVFIRLKDTSLGELLKKNSCETFDKNFSIAISPSITY
RFDPLLTLFKCNRNQKSRNEEFFNSSSYQSYNVCDSFILYYNISIHYYQVSEIPSSCSFI
QLPLTSNSEAKTNGSGLFHLLTDEVMLGWTVSDECNQCYYTGGRCQTDNATNRFLCSDTN
GGHKFAKVIVAVSVFIGSVVGLCAIACVLWFYMRRRNGSSPFISRNTSGISMIHHELEER
CEYLGIPVFSYEELEEATNKFSSSRELGDGGYGTVYYGKLKDGKEVAVKRLYENNHRQME
QFINEIEILTRLRHPNLVTLYGCASRRSRELFLVYEYIPNGTIADHLNGHRAKDKLLTWS
IRLKIAIETASALAYLHASDIIHRDVKTNNILLDNKFCVKVADFGLSKSFPNDVTHISTA
PQGTPGYVDPQYHECYHLTDKSDVYSFGVVLVELISSKQAVDMNRHMHEINLANYAMNRI
LKSAFDEVIDPSLGFETDAEVRRMTTSVAELAFQCLQVVKDMRPTMEEVHEALKLIKYSE
WKNYQKKDINSCNTKTRTVKVHRHPSETDDAVLLKKNIPASPDTVIDTWASSSTTTSTGG
*

Transcript Sequence

Transcript ID

PGSC0003DMT400078451
Transcript Infomation

pacid=37443028 locus=PGSC0003DMG400030536 ID=PGSC0003DMT400078451.v4.03 annot-version=v4.03
Sequence

ATGGATATGTTCTCTTGTTTTTTCGTCTTCGTTTTGTTTCACTTTTGGTGCTTTGATTCA
GCTCAAGGACAGAACACATCCTACCCAAACTGCACTAAAGAATTCCAGTGTGGGAACTTA
AGAAATTTGAGTTTTCCTTTCTACAAATCCACTGAACTTGATTGTGGATTGTCCAAAGTT
GATTGTGATGTTAGTCCAAATCCTATTATTGAATTAGAAGGGGTGAAATATCAAGCTCTT
TTAAAAGCTGATGTTTTTATCAGACTTAAGGACACTAGTCTTGGAGAACTTTTGAAGAAG
AACAGTTGTGAGACTTTTGATAAAAATTTCTCGATCGCTATTTCTCCTTCAATAACATAT
AGATTTGATCCCTTACTCACTTTGTTCAAATGCAACAGAAACCAAAAGAGTAGAAATGAA
GAATTTTTCAACTCCAGCAGTTATCAAAGTTACAATGTCTGTGATAGTTTCATATTATAC
TATAACATCTCCATCCATTATTATCAAGTATCTGAAATTCCTAGTAGCTGTTCATTTATT
CAGTTGCCTTTGACATCAAATTCAGAAGCAAAAACAAATGGAAGTGGCTTATTTCATCTG
TTAACTGATGAAGTTATGCTAGGATGGACTGTGTCTGATGAGTGCAATCAGTGTTATTAT
ACCGGAGGAAGGTGTCAAACAGATAATGCTACTAATAGATTTCTTTGTTCTGATACCAAT
GGTGGTCATAAATTTGCGAAAGTGATTGTTGCAGTTTCAGTATTTATCGGTTCTGTTGTT
GGACTTTGTGCAATTGCCTGTGTTCTATGGTTTTACATGAGGAGGAGAAATGGTTCTTCA
CCATTTATTTCAAGAAATACATCTGGTATTTCAATGATTCATCACGAGCTCGAGGAACGT
TGTGAGTACCTAGGGATTCCTGTATTCTCCTATGAAGAACTTGAAGAAGCCACCAACAAA
TTCAGCTCTTCTAGAGAACTTGGTGATGGAGGTTATGGAACTGTGTACTATGGAAAACTT
AAAGATGGAAAAGAAGTTGCAGTTAAGAGACTTTATGAGAACAATCACAGACAAATGGAG
CAGTTTATCAACGAAATTGAAATTCTCACTCGCCTTAGGCATCCGAATCTTGTTACCCTT
TATGGATGTGCATCAAGACGTAGCCGTGAACTCTTCCTTGTTTATGAGTACATTCCTAAT
GGAACAATTGCTGATCACCTGAATGGACATAGAGCGAAGGATAAGTTACTAACATGGTCT
ATAAGGCTCAAAATCGCCATTGAAACTGCTAGCGCGTTGGCTTACCTTCATGCTTCTGAC
ATCATACACCGTGATGTCAAAACAAATAACATTCTCCTGGACAATAAGTTTTGTGTCAAA
GTAGCAGATTTCGGGCTGTCAAAATCCTTCCCTAATGATGTTACTCATATCTCAACCGCA
CCTCAGGGGACCCCGGGATATGTTGATCCTCAGTATCATGAATGTTACCACCTTACTGAT
AAGAGTGATGTTTATAGCTTTGGGGTTGTCCTTGTTGAGCTCATATCATCAAAGCAAGCT
GTAGATATGAACAGACATATGCACGAGATTAATTTGGCAAACTACGCGATGAACAGGATA
CTAAAATCCGCATTTGATGAGGTGATTGATCCATCTCTTGGATTCGAGACAGATGCTGAA
GTTAGGAGGATGACAACATCAGTGGCAGAACTAGCTTTCCAGTGCTTGCAAGTTGTCAAG
GACATGAGACCTACAATGGAAGAAGTACACGAAGCGTTGAAGCTTATCAAATACAGTGAA
TGGAAAAATTATCAGAAAAAGGATATCAATAGCTGCAATACCAAGACAAGAACTGTAAAA
GTTCATCGTCATCCTTCTGAAACGGATGATGCTGTGTTATTGAAGAAAAACATTCCAGCT
TCACCTGATACTGTGATTGATACATGGGCTAGTAGTTCCACTACAACTAGTACTGGAGGG
TGA