Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078444
CDS Infomation

pacid=37442994 polypeptide=PGSC0003DMP400053150 locus=PGSC0003DMG400030534 ID=PGSC0003DMT400078444.v4.03 annot-version=v4.03
Sequence

ATGGCTTTGGCTTCTTCTTTTGTTTGCTTTATTCTATCTCTTCTTCTGATTTTAGTTCAG
GCAAACGGGAGAAATGATTCAACTTGTCCAAAGTCCTTTTCATGTGGAAATCTTACTGAC
ATGAGCTTTCCTTTCACTCTTCTAACACAACCTGACTGTGGAATAATGTCCATTTCTGGT
TGTAATGTTAAACAATATCCAAGAATCCAATTGCTTCCTGGAGGAGATTGGTATGATGCT
ATGGACGAGCCGTTTAATTATACAGTTTGGCTCGTGGACCTGAAGCTTCAAACTATATTG
AGGAAAAACAAGTGCCAGGCTTTTAACAAAAATATCTCCCTTCCAGATTCTCCTTCGATA
TCTTTCAAAATTATCCAAATATTTATGAGGGATTTTTACAGATGCAACAGCACTAGTAGT
ACCCCGAAGAACAACGAGCATTTTTCTGGTTATAAAATGTACAATGGTTGTAAAGGCTTT
AGCATATACTACAAGCTTCCTGGAGGTGATGATGAAGACGTTCGAGCAGGCAATCTTACT
ACAAACTGTTCACTTCTCCAATTGCCAATTCACCCAACATTAGATGGAAACTTTTTTACT
CCCGGATTTCTAGTAGAATGGAAACTCTCTGATGACTGTAACAAATGTCACTATGATGGA
GATGCAGCAACGACTACAAGAAGTATGGTGGGGCTGGTTCTAGGCACAGGATTGTTGATG
ATAACTTGTTTAGCTGTCTCCTTTATCTGGTGTTACAAGGAGAGGAAATTTAGTCCATTC
CGCTACCTCTCGGCAAAGAAATTCTCGGATATATTTAAACATGATGTTGAGGGAGGGAGC
AAATACTTTGGTGTCCCAGTCTTCTCTTATTCAGAACTTGAAAAAGCCACAAATGATTTC
AGTTCCTCCAGAGTACTTGGACATGGAGGTTTTGGAACTGTTTACTATGGAAAACTAAAG
GATGGACGAGAGGTTGCTGTGAAGCGCCTTTACGAGCAGAACTGCAAACAAATGCAGCAG
TTTGTAAATGAAATTGAGATCCTTACTAGGCTAAGGCACAACAATCTTGTCACCCTCTAT
GGCTGCACATCAAGGCGTAGCCGTGAACTACTCCTTGTCTATGAATACATTCCTAATGGA
ACTCTTGCTGATCACCTCCATGGTGACAGAGCGAAGAACAGATCACTCACCTGGCCAGTC
CGTTTGAACATTGCCATAGAAACTGCTGGTGCATTGGCTTACCTTCATGCTTCTGACATA
ATACACTGTGATGTCAAGACTAATAACATACTCCTTGATCAGAATTTCAGTGTCAAAGTT
GCAGATTTCGGGATATCACGTCTCTTCCCAAATGACGTCTCTCATATATCAACTGCACCC
CGGGGGACCCCTGGCTATATTGATCCAAAGTATCAAGAATGTTATCAGCTGACTAGTAAA
AGTGATGTCTATAGCTTCGGGGTGGTCCTTGTTGAGCTCATTTCATCAATGCCAGCTGTG
GATATGAACAGGCATAGCCAAGAAATTAATTTGGCTAACTTTGCTATAAACAAGATCGTA
AAATGTGCATTTCATGAGTTGATCGATCCATCCCTGGGGTTCGACTCAGATACCAAGATT
TTGGAAATGACTACTTCAGTGGCAGAGCTGGCTTTTCTATGCTTACAGACAGATAGGGAC
ATGAGGCCTACTATGGTTGAAGTTTTGGATACTCTAAAGGAGATTCAGACTAGTGAATTT
GACAATGAAAAGAAAGTATTTCCTTTCCCTGAATCAGAAGATCAGTTATTGCTTAAACAA
GTTAAATCACTACCTTCACCAAATTCTGTGACTGGTAAATGGATTACTTGCTCTAGTATA
ACTAGTACAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053150
PEP Infomation

pacid=37442994 transcript=PGSC0003DMT400078444 locus=PGSC0003DMG400030534 ID=PGSC0003DMT400078444.v4.03 annot-version=v4.03
Sequence

MALASSFVCFILSLLLILVQANGRNDSTCPKSFSCGNLTDMSFPFTLLTQPDCGIMSISG
CNVKQYPRIQLLPGGDWYDAMDEPFNYTVWLVDLKLQTILRKNKCQAFNKNISLPDSPSI
SFKIIQIFMRDFYRCNSTSSTPKNNEHFSGYKMYNGCKGFSIYYKLPGGDDEDVRAGNLT
TNCSLLQLPIHPTLDGNFFTPGFLVEWKLSDDCNKCHYDGDAATTTRSMVGLVLGTGLLM
ITCLAVSFIWCYKERKFSPFRYLSAKKFSDIFKHDVEGGSKYFGVPVFSYSELEKATNDF
SSSRVLGHGGFGTVYYGKLKDGREVAVKRLYEQNCKQMQQFVNEIEILTRLRHNNLVTLY
GCTSRRSRELLLVYEYIPNGTLADHLHGDRAKNRSLTWPVRLNIAIETAGALAYLHASDI
IHCDVKTNNILLDQNFSVKVADFGISRLFPNDVSHISTAPRGTPGYIDPKYQECYQLTSK
SDVYSFGVVLVELISSMPAVDMNRHSQEINLANFAINKIVKCAFHELIDPSLGFDSDTKI
LEMTTSVAELAFLCLQTDRDMRPTMVEVLDTLKEIQTSEFDNEKKVFPFPESEDQLLLKQ
VKSLPSPNSVTGKWITCSSITSTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400078444
Transcript Infomation

pacid=37442994 locus=PGSC0003DMG400030534 ID=PGSC0003DMT400078444.v4.03 annot-version=v4.03
Sequence

ATGGCTTTGGCTTCTTCTTTTGTTTGCTTTATTCTATCTCTTCTTCTGATTTTAGTTCAG
GCAAACGGGAGAAATGATTCAACTTGTCCAAAGTCCTTTTCATGTGGAAATCTTACTGAC
ATGAGCTTTCCTTTCACTCTTCTAACACAACCTGACTGTGGAATAATGTCCATTTCTGGT
TGTAATGTTAAACAATATCCAAGAATCCAATTGCTTCCTGGAGGAGATTGGTATGATGCT
ATGGACGAGCCGTTTAATTATACAGTTTGGCTCGTGGACCTGAAGCTTCAAACTATATTG
AGGAAAAACAAGTGCCAGGCTTTTAACAAAAATATCTCCCTTCCAGATTCTCCTTCGATA
TCTTTCAAAATTATCCAAATATTTATGAGGGATTTTTACAGATGCAACAGCACTAGTAGT
ACCCCGAAGAACAACGAGCATTTTTCTGGTTATAAAATGTACAATGGTTGTAAAGGCTTT
AGCATATACTACAAGCTTCCTGGAGGTGATGATGAAGACGTTCGAGCAGGCAATCTTACT
ACAAACTGTTCACTTCTCCAATTGCCAATTCACCCAACATTAGATGGAAACTTTTTTACT
CCCGGATTTCTAGTAGAATGGAAACTCTCTGATGACTGTAACAAATGTCACTATGATGGA
GATGCAGCAACGACTACAAGAAGTATGGTGGGGCTGGTTCTAGGCACAGGATTGTTGATG
ATAACTTGTTTAGCTGTCTCCTTTATCTGGTGTTACAAGGAGAGGAAATTTAGTCCATTC
CGCTACCTCTCGGCAAAGAAATTCTCGGATATATTTAAACATGATGTTGAGGGAGGGAGC
AAATACTTTGGTGTCCCAGTCTTCTCTTATTCAGAACTTGAAAAAGCCACAAATGATTTC
AGTTCCTCCAGAGTACTTGGACATGGAGGTTTTGGAACTGTTTACTATGGAAAACTAAAG
GATGGACGAGAGGTTGCTGTGAAGCGCCTTTACGAGCAGAACTGCAAACAAATGCAGCAG
TTTGTAAATGAAATTGAGATCCTTACTAGGCTAAGGCACAACAATCTTGTCACCCTCTAT
GGCTGCACATCAAGGCGTAGCCGTGAACTACTCCTTGTCTATGAATACATTCCTAATGGA
ACTCTTGCTGATCACCTCCATGGTGACAGAGCGAAGAACAGATCACTCACCTGGCCAGTC
CGTTTGAACATTGCCATAGAAACTGCTGGTGCATTGGCTTACCTTCATGCTTCTGACATA
ATACACTGTGATGTCAAGACTAATAACATACTCCTTGATCAGAATTTCAGTGTCAAAGTT
GCAGATTTCGGGATATCACGTCTCTTCCCAAATGACGTCTCTCATATATCAACTGCACCC
CGGGGGACCCCTGGCTATATTGATCCAAAGTATCAAGAATGTTATCAGCTGACTAGTAAA
AGTGATGTCTATAGCTTCGGGGTGGTCCTTGTTGAGCTCATTTCATCAATGCCAGCTGTG
GATATGAACAGGCATAGCCAAGAAATTAATTTGGCTAACTTTGCTATAAACAAGATCGTA
AAATGTGCATTTCATGAGTTGATCGATCCATCCCTGGGGTTCGACTCAGATACCAAGATT
TTGGAAATGACTACTTCAGTGGCAGAGCTGGCTTTTCTATGCTTACAGACAGATAGGGAC
ATGAGGCCTACTATGGTTGAAGTTTTGGATACTCTAAAGGAGATTCAGACTAGTGAATTT
GACAATGAAAAGAAAGTATTTCCTTTCCCTGAATCAGAAGATCAGTTATTGCTTAAACAA
GTTAAATCACTACCTTCACCAAATTCTGTGACTGGTAAATGGATTACTTGCTCTAGTATA
ACTAGTACAAAGTAG