Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078436
CDS Infomation

pacid=37442147 polypeptide=PGSC0003DMP400053142 locus=PGSC0003DMG401030532 ID=PGSC0003DMT400078436.v4.03 annot-version=v4.03
Sequence

ATGATTTGTTTAGCTGTCTACTTTATCTGGTGTTGCAAGAGGAGGAAATTTAATCCGCCC
CACTTCCTCTCAACAAGGAAATTGTCATATTTATTTAAAAATGATGTTGAGGGAGGCAGT
ATATACTTTGGCATCCCAGTCTTCTCTTATTCAGAACTTGAAGAAGCCACAAATGATTTC
AATTCCTCTCGAATCCTTGGAGATGGAGGTTTCGGAACTGTTTACTATGGGAAACTTAAG
GATGGACGAGAGGTTGCTGTGAAGCGCCTTTACGAGCACAACTGCAAACGAATGCAGCAG
TTTGTAAATGAAATTGAGATCCTTACTAGGCTAAGGCACACCAATCTTGTCACTCTTTAT
GGCTGCACTTCAAGGCGTAGCCGTGAACTAATCCTTGTCTATGAATACATTCCTAATGGA
ACTCTTGCCGATCACCTCCATGGTGACAGAGTGAAGGACGGATCACTCACCTGGCTAGTC
CGCATGAACATTGCCATAGAAACTGCTGGTGCATTGGCTTACCTGCATGCGTCTGACGTA
ATACACTGCGATGTGAAGACTAATAACATACTCCTTGATCACAACTTTAATGTTAAAGTT
GCAGATTTTGGGATATCACGGCTTTTCCCAAATGATGTCACTCATATTTCAACTGCACCC
CGGGGTACCCCTGGCTATATCGATCCAAAGTATCATGAATGTTACCAGCTGACTAGTAAA
AGTGATGTTTATAGCTTCGGGGTGGTCCTTGTCGAGCTCATTTCATCAATGCCAGCTGTG
GATATGACTAGACATAGCCAAGAGATTAATTTGGCTAACTTTGCAATAAACAAGATTGTA
AAATGTGCATTTAATGAGTTGATTGATCCATCCCTGGGGTTCGACTCAGATACCAAGATT
TTGGAGATGACTACTTCAGTGGCAGAGTTGGCTTTTCTATGCTTACAGACAGATAGGGAC
ATGAGGCCTACTATGGTTGAAGTTTTGGATACTCTAAAAGAGATTCAGATTAGTGAATTT
GACAATGAGAAGAGAGCTGACACTAATCTCAGTGGAAATGAAGCTAAAATTGTTACAGCA
CTCCCTTTCCCTAAATCAGAAGATAAGTTTATGCTGAAACAAGTTAAATCACTGTCTTCT
CCAAATTCTGTTACTGATAAATGGGTTACTTGCTCTGATATAACTACTACAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053142
PEP Infomation

pacid=37442147 transcript=PGSC0003DMT400078436 locus=PGSC0003DMG401030532 ID=PGSC0003DMT400078436.v4.03 annot-version=v4.03
Sequence

MICLAVYFIWCCKRRKFNPPHFLSTRKLSYLFKNDVEGGSIYFGIPVFSYSELEEATNDF
NSSRILGDGGFGTVYYGKLKDGREVAVKRLYEHNCKRMQQFVNEIEILTRLRHTNLVTLY
GCTSRRSRELILVYEYIPNGTLADHLHGDRVKDGSLTWLVRMNIAIETAGALAYLHASDV
IHCDVKTNNILLDHNFNVKVADFGISRLFPNDVTHISTAPRGTPGYIDPKYHECYQLTSK
SDVYSFGVVLVELISSMPAVDMTRHSQEINLANFAINKIVKCAFNELIDPSLGFDSDTKI
LEMTTSVAELAFLCLQTDRDMRPTMVEVLDTLKEIQISEFDNEKRADTNLSGNEAKIVTA
LPFPKSEDKFMLKQVKSLSSPNSVTDKWVTCSDITTTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400078436
Transcript Infomation

pacid=37442147 locus=PGSC0003DMG401030532 ID=PGSC0003DMT400078436.v4.03 annot-version=v4.03
Sequence

ATGATTTGTTTAGCTGTCTACTTTATCTGGTGTTGCAAGAGGAGGAAATTTAATCCGCCC
CACTTCCTCTCAACAAGGAAATTGTCATATTTATTTAAAAATGATGTTGAGGGAGGCAGT
ATATACTTTGGCATCCCAGTCTTCTCTTATTCAGAACTTGAAGAAGCCACAAATGATTTC
AATTCCTCTCGAATCCTTGGAGATGGAGGTTTCGGAACTGTTTACTATGGGAAACTTAAG
GATGGACGAGAGGTTGCTGTGAAGCGCCTTTACGAGCACAACTGCAAACGAATGCAGCAG
TTTGTAAATGAAATTGAGATCCTTACTAGGCTAAGGCACACCAATCTTGTCACTCTTTAT
GGCTGCACTTCAAGGCGTAGCCGTGAACTAATCCTTGTCTATGAATACATTCCTAATGGA
ACTCTTGCCGATCACCTCCATGGTGACAGAGTGAAGGACGGATCACTCACCTGGCTAGTC
CGCATGAACATTGCCATAGAAACTGCTGGTGCATTGGCTTACCTGCATGCGTCTGACGTA
ATACACTGCGATGTGAAGACTAATAACATACTCCTTGATCACAACTTTAATGTTAAAGTT
GCAGATTTTGGGATATCACGGCTTTTCCCAAATGATGTCACTCATATTTCAACTGCACCC
CGGGGTACCCCTGGCTATATCGATCCAAAGTATCATGAATGTTACCAGCTGACTAGTAAA
AGTGATGTTTATAGCTTCGGGGTGGTCCTTGTCGAGCTCATTTCATCAATGCCAGCTGTG
GATATGACTAGACATAGCCAAGAGATTAATTTGGCTAACTTTGCAATAAACAAGATTGTA
AAATGTGCATTTAATGAGTTGATTGATCCATCCCTGGGGTTCGACTCAGATACCAAGATT
TTGGAGATGACTACTTCAGTGGCAGAGTTGGCTTTTCTATGCTTACAGACAGATAGGGAC
ATGAGGCCTACTATGGTTGAAGTTTTGGATACTCTAAAAGAGATTCAGATTAGTGAATTT
GACAATGAGAAGAGAGCTGACACTAATCTCAGTGGAAATGAAGCTAAAATTGTTACAGCA
CTCCCTTTCCCTAAATCAGAAGATAAGTTTATGCTGAAACAAGTTAAATCACTGTCTTCT
CCAAATTCTGTTACTGATAAATGGGTTACTTGCTCTGATATAACTACTACAAAGTAG