Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078428
CDS Infomation

pacid=37443642 polypeptide=PGSC0003DMP400053134 locus=PGSC0003DMG401030531 ID=PGSC0003DMT400078428.v4.03 annot-version=v4.03
Sequence

ATGCATGTCCCTGTATGTCCATTTCCATCCACTGAAACATTTTATAAGTTCTATTTTCTT
TCTTGTCAGATGCAGATCATTATTTTTCGATACTACCTCCTCCACGATTTGTCTGACATT
ACTTCATTTTCAGGGAATTATAATTTGGGGTTGATTCTTGGCTCAGTTTTAGGTGGAGCT
GTGTTTATAATCCTCGTGGTCACTTTCATTGTTTGTTGTTACAAGAAAGAACACAAAAGT
TGTTTGTACTTCACCTCGCGAAAAAAATCTTGTGATCGTTCCTTAACACATGATTTTGAT
GGAAGTAGTAATTACCATGGAGTCTCGGTCTTCTCCTATGTTGAACTTGAAGAAGCTACA
AGTAACTTCGATTCCTCCAATGAACTAGGAGATGGAGGTTTTGGTGCTGTTTACTATGGT
AAACTTAAGGATGGGAGAGAAGTTGCAGTGAAGCGACTTTACGAGCACAATTGCAAGAGA
ATGGAACAGTTTAAAAATGAAATTGACATTCTCTCTCGCCTAAGGCATCGAAATCTTGTT
ACCCTTTATGGTTGCACATCAAAGCACAGCCGTGAACTCCTCCTTGTTTATGAATACATT
CCCAATGGAACAGTGGCAGATCACCTGAATGGGGATAGAGCAAAGGACGGATTCCTCCCA
TGGCCTATCCGCATGAATATTGCTGTAGAAACTGCTTGTGCATTGGCTTACCTCCATGCT
TCTGACATAATACATCGCGATGTGAAGACTAGCAACATACTCCTCGACAGCAATTGTTGT
GTCAAAGTTGCAGATTTTGGGCTTTCGAGACTTTTTCCGAATGATGCTACTCATGTCTCA
ACTGCTCCTCAAGGGACTGCTGGATATGTTGATCCAGAGTATCATGAATGTTACCAGCTC
ACTGATAAAAGTGATGTTTATAGTTTTGGTGTTGTCCTTGTTGAACTTATCTCATCAATG
CCTGCTGTTGATATTACTAGGCGTCGACATGAGATCAATTTGGCCAACTTAGCGATAAAC
AGGATTCAGAGATGTGCATTTGATGAGCTGATTGATCCATCTCTGGGATTTAAATCAGAT
GCACAGGTTATGAGAATGACTACTTCAGTAGCAGAGCTAGCATTTCAATGCTTGCAGCTT
GAAACGGACTTGAGACCAAAAATGGATGAAGTACTAGAGACACTCAAACATATTCAAGGC
ACCTATACGGATCAAATCAAAGATGAGAAGACGAATGACTCAATTGTTGATAACACAGAA
TGTAGTGGTGAAAAAGTCCCTACTTCTCCTACATCAGATAAAATAGTTTTGTTAAAGAAA
ATGCATTTGCCACCTTCACCTATTTCTGTAACTGAGAGCTGGGTTAGTAGCTGTGGCAGT
AGTAATGTTAGCGGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053134
PEP Infomation

pacid=37443642 transcript=PGSC0003DMT400078428 locus=PGSC0003DMG401030531 ID=PGSC0003DMT400078428.v4.03 annot-version=v4.03
Sequence

MHVPVCPFPSTETFYKFYFLSCQMQIIIFRYYLLHDLSDITSFSGNYNLGLILGSVLGGA
VFIILVVTFIVCCYKKEHKSCLYFTSRKKSCDRSLTHDFDGSSNYHGVSVFSYVELEEAT
SNFDSSNELGDGGFGAVYYGKLKDGREVAVKRLYEHNCKRMEQFKNEIDILSRLRHRNLV
TLYGCTSKHSRELLLVYEYIPNGTVADHLNGDRAKDGFLPWPIRMNIAVETACALAYLHA
SDIIHRDVKTSNILLDSNCCVKVADFGLSRLFPNDATHVSTAPQGTAGYVDPEYHECYQL
TDKSDVYSFGVVLVELISSMPAVDITRRRHEINLANLAINRIQRCAFDELIDPSLGFKSD
AQVMRMTTSVAELAFQCLQLETDLRPKMDEVLETLKHIQGTYTDQIKDEKTNDSIVDNTE
CSGEKVPTSPTSDKIVLLKKMHLPPSPISVTESWVSSCGSSNVSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400078428
Transcript Infomation

pacid=37443642 locus=PGSC0003DMG401030531 ID=PGSC0003DMT400078428.v4.03 annot-version=v4.03
Sequence

ATGCATGTCCCTGTATGTCCATTTCCATCCACTGAAACATTTTATAAGTTCTATTTTCTT
TCTTGTCAGATGCAGATCATTATTTTTCGATACTACCTCCTCCACGATTTGTCTGACATT
ACTTCATTTTCAGGGAATTATAATTTGGGGTTGATTCTTGGCTCAGTTTTAGGTGGAGCT
GTGTTTATAATCCTCGTGGTCACTTTCATTGTTTGTTGTTACAAGAAAGAACACAAAAGT
TGTTTGTACTTCACCTCGCGAAAAAAATCTTGTGATCGTTCCTTAACACATGATTTTGAT
GGAAGTAGTAATTACCATGGAGTCTCGGTCTTCTCCTATGTTGAACTTGAAGAAGCTACA
AGTAACTTCGATTCCTCCAATGAACTAGGAGATGGAGGTTTTGGTGCTGTTTACTATGGT
AAACTTAAGGATGGGAGAGAAGTTGCAGTGAAGCGACTTTACGAGCACAATTGCAAGAGA
ATGGAACAGTTTAAAAATGAAATTGACATTCTCTCTCGCCTAAGGCATCGAAATCTTGTT
ACCCTTTATGGTTGCACATCAAAGCACAGCCGTGAACTCCTCCTTGTTTATGAATACATT
CCCAATGGAACAGTGGCAGATCACCTGAATGGGGATAGAGCAAAGGACGGATTCCTCCCA
TGGCCTATCCGCATGAATATTGCTGTAGAAACTGCTTGTGCATTGGCTTACCTCCATGCT
TCTGACATAATACATCGCGATGTGAAGACTAGCAACATACTCCTCGACAGCAATTGTTGT
GTCAAAGTTGCAGATTTTGGGCTTTCGAGACTTTTTCCGAATGATGCTACTCATGTCTCA
ACTGCTCCTCAAGGGACTGCTGGATATGTTGATCCAGAGTATCATGAATGTTACCAGCTC
ACTGATAAAAGTGATGTTTATAGTTTTGGTGTTGTCCTTGTTGAACTTATCTCATCAATG
CCTGCTGTTGATATTACTAGGCGTCGACATGAGATCAATTTGGCCAACTTAGCGATAAAC
AGGATTCAGAGATGTGCATTTGATGAGCTGATTGATCCATCTCTGGGATTTAAATCAGAT
GCACAGGTTATGAGAATGACTACTTCAGTAGCAGAGCTAGCATTTCAATGCTTGCAGCTT
GAAACGGACTTGAGACCAAAAATGGATGAAGTACTAGAGACACTCAAACATATTCAAGGC
ACCTATACGGATCAAATCAAAGATGAGAAGACGAATGACTCAATTGTTGATAACACAGAA
TGTAGTGGTGAAAAAGTCCCTACTTCTCCTACATCAGATAAAATAGTTTTGTTAAAGAAA
ATGCATTTGCCACCTTCACCTATTTCTGTAACTGAGAGCTGGGTTAGTAGCTGTGGCAGT
AGTAATGTTAGCGGGTGA