Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078394
CDS Infomation

pacid=37443759 polypeptide=PGSC0003DMP400053110 locus=PGSC0003DMG400030520 ID=PGSC0003DMT400078394.v4.03 annot-version=v4.03
Sequence

ATGAGTAACACTGCATATGGAATATCTGAGCCAATTTCAACTGGTGGACCCTCTGAATTG
GATGTTGTTAGAAACCGCGAACTGGAAAAGTTTCTTGAAGATGCAGGCTTATATGAAAGT
CACGAAGAGGCCATTAAAAGGGAAGAAGTGCTAGGGAGATTAGACCAGATTGTGAAGACG
TGGGTGAAAAATGTCTGTCGTGCTAAAGGCTTCAATGATGACCTGGTGCATGAGGCAAAT
GCAAAAATCTTCACATTTGGTTCATATCGGCTTGGTGTACATGGCCCTGGTGCTGATATA
GACACACTATGTGTAGGACCTAGACATGCGATGCGTGAGGACTTCTTTGGTGAACTTCAT
AGAATGCTTGAAGAGATGCCTGAAATACAAGAACTTCATCCTGTTCCTGACGCTCACGTT
CCTGTTATGAAGTTCAAGTTCAATGGGGTTTCTATAGACCTTCTTTATGCGAATGTATCA
CTCTGGGTTATTCCTGAGGACTTGGATGTTTCTCAGGAGTCTATACTACAGAATGTGGAT
GATCAGACTGTTCGTAGTCTTAATGGATGCAGAGTAACAGATCAAGTTTTGCATTTAGTA
CCGAATATTCAGAGTTTCCGCACCGCACTGAGATGCATGAGATTGTGGGCAAAACGGCGT
GGAGTTTACTCAAATGTTACCGGATTTCTAGGTGGTATAAATTGGGCACTGCTTGTTGCT
AGGATTTGCCAGCTTTATCCTAATGCAGCTCCTAGCATGTTGGTCTCTCGGTTTTTCAGA
GTCTACAGTTTGTGGCGCTGGCCAAACCCAGTTTTGCTGTGTCCAATAAATGAAGGATCT
CTAGGGCTGGCCTATTGGGATCCTCGGAGGAATTTCAAAGATAGGCAGCATCTAATGCCG
ATAATAACTCCAGCATACCCCTGCATGAATTCGAGTTACAATGTTTCAACGAGTACCTTG
CGTGTCATGATGGAAGAATTCCTTAGAGGGAATGAAATTTGTGAGGCAATAGAAGCTAAC
AAAGCTAGCTGGGGAAGTCTATTTGAGCCTTTCCCTTTCTTTGAAGCCTATAAAAACTAC
TTGCGAATAGACATAGCTACAGAAAGTGACGATGACATGAGGCAATGGAAAGGATGGGTT
GAATCTAGGATACGCCTGCTTACTCTAAAGATTGAGAGAGACACAGTCGGTGTACTTCAG
TGCCATCCACATCCGGGTGAATTCTCAGATAAATCTAAGCCATTTCACCATTCTTATTTT
ATGGGATTGCGCAGAAAACAAGGTGTTAATCCTCAACAAGGCGAACAATTTGATATAAGG
TCGACAGTTGAGGATTTTAAGCAAGATGTATATGCATATTCTTTTTGGAAATCTAGCATG
GGGATTCATGTGTGCCATGTAAGACGAAAGGATCTTCCTGACTTTGTCTTCTCGGGAGGA
GTACGTCCTGCTCAGCCTGCAAAAAGTGAAAGCCGTTCAGGCTCAAGATCGCTTGGCTCT
GCTAAAACAACATCTCCAGATGCTGCTTCTAGCAGAAAGAGAAAACATGACGAAGTTAAT
ACAGGTTTTAGCCCAAAAGGCAGTGATGCCAGCTCACCAGGTGAAAGTAGAGAGTTGAAA
CGCTTTGATGCCGATATTGGTGATACTTCGAGTACTACGCTTGTTGATAACCAAAGCACA
TTGCCTGTGCCTGTGCCCGCGCCTGCATCTGGTGCAACTGTAACAGAGACAATAACAGTC
GTGCAATCTGCAGAACTGACTGTGGGCCAGCAAAGTGGACCCCATGGTGTCGAAGATCTT
GGGTATGATCTGGAATTGACAAATGGAGTTAAGCATTTTGATGGGGCTAATGAGCTGCAG
ACAGTGCCCCCTACACCAGAGCAAATTGTTGGGGCAGCAACATCAGAGGAAAAGGACAGA
ATTGGTGGTTCTAGCACTAATGTCCTGCAAAGCGAGGGCTTGGAAGAACTTGAGGTTGTT
TCTAACTTCATAGATTTCAATTTTAATCCCAAACGTGTCGAATACTTGTCATTTGAGATC
CTGATTTTGTGCACCCTCAGTCTCTCCATACACAGGTTGCATTATACAAATATCCTCACT
TTTCAACTTTTTTGGCTGCATCATACCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400053110
PEP Infomation

pacid=37443759 transcript=PGSC0003DMT400078394 locus=PGSC0003DMG400030520 ID=PGSC0003DMT400078394.v4.03 annot-version=v4.03
Sequence

MSNTAYGISEPISTGGPSELDVVRNRELEKFLEDAGLYESHEEAIKREEVLGRLDQIVKT
WVKNVCRAKGFNDDLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAMREDFFGELH
RMLEEMPEIQELHPVPDAHVPVMKFKFNGVSIDLLYANVSLWVIPEDLDVSQESILQNVD
DQTVRSLNGCRVTDQVLHLVPNIQSFRTALRCMRLWAKRRGVYSNVTGFLGGINWALLVA
RICQLYPNAAPSMLVSRFFRVYSLWRWPNPVLLCPINEGSLGLAYWDPRRNFKDRQHLMP
IITPAYPCMNSSYNVSTSTLRVMMEEFLRGNEICEAIEANKASWGSLFEPFPFFEAYKNY
LRIDIATESDDDMRQWKGWVESRIRLLTLKIERDTVGVLQCHPHPGEFSDKSKPFHHSYF
MGLRRKQGVNPQQGEQFDIRSTVEDFKQDVYAYSFWKSSMGIHVCHVRRKDLPDFVFSGG
VRPAQPAKSESRSGSRSLGSAKTTSPDAASSRKRKHDEVNTGFSPKGSDASSPGESRELK
RFDADIGDTSSTTLVDNQSTLPVPVPAPASGATVTETITVVQSAELTVGQQSGPHGVEDL
GYDLELTNGVKHFDGANELQTVPPTPEQIVGAATSEEKDRIGGSSTNVLQSEGLEELEVV
SNFIDFNFNPKRVEYLSFEILILCTLSLSIHRLHYTNILTFQLFWLHHT*

Transcript Sequence

Transcript ID

PGSC0003DMT400078394
Transcript Infomation

pacid=37443759 locus=PGSC0003DMG400030520 ID=PGSC0003DMT400078394.v4.03 annot-version=v4.03
Sequence

ATGAGTAACACTGCATATGGAATATCTGAGCCAATTTCAACTGGTGGACCCTCTGAATTG
GATGTTGTTAGAAACCGCGAACTGGAAAAGTTTCTTGAAGATGCAGGCTTATATGAAAGT
CACGAAGAGGCCATTAAAAGGGAAGAAGTGCTAGGGAGATTAGACCAGATTGTGAAGACG
TGGGTGAAAAATGTCTGTCGTGCTAAAGGCTTCAATGATGACCTGGTGCATGAGGCAAAT
GCAAAAATCTTCACATTTGGTTCATATCGGCTTGGTGTACATGGCCCTGGTGCTGATATA
GACACACTATGTGTAGGACCTAGACATGCGATGCGTGAGGACTTCTTTGGTGAACTTCAT
AGAATGCTTGAAGAGATGCCTGAAATACAAGAACTTCATCCTGTTCCTGACGCTCACGTT
CCTGTTATGAAGTTCAAGTTCAATGGGGTTTCTATAGACCTTCTTTATGCGAATGTATCA
CTCTGGGTTATTCCTGAGGACTTGGATGTTTCTCAGGAGTCTATACTACAGAATGTGGAT
GATCAGACTGTTCGTAGTCTTAATGGATGCAGAGTAACAGATCAAGTTTTGCATTTAGTA
CCGAATATTCAGAGTTTCCGCACCGCACTGAGATGCATGAGATTGTGGGCAAAACGGCGT
GGAGTTTACTCAAATGTTACCGGATTTCTAGGTGGTATAAATTGGGCACTGCTTGTTGCT
AGGATTTGCCAGCTTTATCCTAATGCAGCTCCTAGCATGTTGGTCTCTCGGTTTTTCAGA
GTCTACAGTTTGTGGCGCTGGCCAAACCCAGTTTTGCTGTGTCCAATAAATGAAGGATCT
CTAGGGCTGGCCTATTGGGATCCTCGGAGGAATTTCAAAGATAGGCAGCATCTAATGCCG
ATAATAACTCCAGCATACCCCTGCATGAATTCGAGTTACAATGTTTCAACGAGTACCTTG
CGTGTCATGATGGAAGAATTCCTTAGAGGGAATGAAATTTGTGAGGCAATAGAAGCTAAC
AAAGCTAGCTGGGGAAGTCTATTTGAGCCTTTCCCTTTCTTTGAAGCCTATAAAAACTAC
TTGCGAATAGACATAGCTACAGAAAGTGACGATGACATGAGGCAATGGAAAGGATGGGTT
GAATCTAGGATACGCCTGCTTACTCTAAAGATTGAGAGAGACACAGTCGGTGTACTTCAG
TGCCATCCACATCCGGGTGAATTCTCAGATAAATCTAAGCCATTTCACCATTCTTATTTT
ATGGGATTGCGCAGAAAACAAGGTGTTAATCCTCAACAAGGCGAACAATTTGATATAAGG
TCGACAGTTGAGGATTTTAAGCAAGATGTATATGCATATTCTTTTTGGAAATCTAGCATG
GGGATTCATGTGTGCCATGTAAGACGAAAGGATCTTCCTGACTTTGTCTTCTCGGGAGGA
GTACGTCCTGCTCAGCCTGCAAAAAGTGAAAGCCGTTCAGGCTCAAGATCGCTTGGCTCT
GCTAAAACAACATCTCCAGATGCTGCTTCTAGCAGAAAGAGAAAACATGACGAAGTTAAT
ACAGGTTTTAGCCCAAAAGGCAGTGATGCCAGCTCACCAGGTGAAAGTAGAGAGTTGAAA
CGCTTTGATGCCGATATTGGTGATACTTCGAGTACTACGCTTGTTGATAACCAAAGCACA
TTGCCTGTGCCTGTGCCCGCGCCTGCATCTGGTGCAACTGTAACAGAGACAATAACAGTC
GTGCAATCTGCAGAACTGACTGTGGGCCAGCAAAGTGGACCCCATGGTGTCGAAGATCTT
GGGTATGATCTGGAATTGACAAATGGAGTTAAGCATTTTGATGGGGCTAATGAGCTGCAG
ACAGTGCCCCCTACACCAGAGCAAATTGTTGGGGCAGCAACATCAGAGGAAAAGGACAGA
ATTGGTGGTTCTAGCACTAATGTCCTGCAAAGCGAGGGCTTGGAAGAACTTGAGGTTGTT
TCTAACTTCATAGATTTCAATTTTAATCCCAAACGTGTCGAATACTTGTCATTTGAGATC
CTGATTTTGTGCACCCTCAGTCTCTCCATACACAGGTTGCATTATACAAATATCCTCACT
TTTCAACTTTTTTGGCTGCATCATACCTAG