Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400078386
CDS Infomation

pacid=37444581 polypeptide=PGSC0003DMP400053103 locus=PGSC0003DMG400030518 ID=PGSC0003DMT400078386.v4.03 annot-version=v4.03
Sequence

ATGGCGACCCTAATGTATCACATGTTGTCATCGTCTTCACTGTTATCTCTGGGATTCTAC
CACCTCATCTGCACCACCCGGAACCGCCTCAAATCCGCCGGAGACTACGTCACCAAACCC
TACCACCCTCTCTCCTTCATATCTCAGCCGCATCTCCGCCGTCTACCTCTTTATCTCCTC
CTTCTCTGCCTCCTCATTTCTCTGATCCATCAATCGCTCGTCTCTTTAGATGCCGATCCT
CTCCTCAAAGGTCATACTCCGGTGCACCGTTTCACCTCACTTCAAGCCGCCGCCGTTGTT
TTCTCGTTTCTAATACTCGTTGTTTTTCTCCTTATCTCCGAGTCAACTTCTCTTCTCCCG
CTTCCTCCCGATCTGTTCTTCGCTTTAGCTGCTGCACTTTTCTACCTACAGTATTCGGTA
TCCGATTCTTCTGCTTCCGTTCAAACCTCCGATCTCCAGGCTAAATGTGATTCCGTTTCA
GCTCGCATTTCTGCGCTCTCCGCGTTACTTTGTCTCGTGATTGCTGTTCAACCTAAGCTT
TTTCTGGCTGATGTTGCGTTAGCTGCTTCTATCTGTCTCCAGGGACTATGGGTTCTACAG
ACGGGACTTTCGCTTTACGTTGATGCGTTCATACCTGAGGGTTGTCATAAGTTATTGGAT
GTTGTTACTGGGGTAGAAGGTTCAACCAAATGCGATTTGGAGGACTCTAAGCTCAGGGCT
ATTGCTATACTTGATTTGGCTTTTGTCGTTCACGTGATGTTTGTCTTGCTCATTGTTACA
GTCACCTATGCTGCCGTTGCTAAAACTATTGGTATCAGGAGATTTGGTTCTTATGAGGCT
CTGCCCAATGCTGACTCGAGTCATATACAAATGAAGGCTATGACGGGAACTCAAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400053103
PEP Infomation

pacid=37444581 transcript=PGSC0003DMT400078386 locus=PGSC0003DMG400030518 ID=PGSC0003DMT400078386.v4.03 annot-version=v4.03
Sequence

MATLMYHMLSSSSLLSLGFYHLICTTRNRLKSAGDYVTKPYHPLSFISQPHLRRLPLYLL
LLCLLISLIHQSLVSLDADPLLKGHTPVHRFTSLQAAAVVFSFLILVVFLLISESTSLLP
LPPDLFFALAAALFYLQYSVSDSSASVQTSDLQAKCDSVSARISALSALLCLVIAVQPKL
FLADVALAASICLQGLWVLQTGLSLYVDAFIPEGCHKLLDVVTGVEGSTKCDLEDSKLRA
IAILDLAFVVHVMFVLLIVTVTYAAVAKTIGIRRFGSYEALPNADSSHIQMKAMTGTQA*

Transcript Sequence

Transcript ID

PGSC0003DMT400078386
Transcript Infomation

pacid=37444581 locus=PGSC0003DMG400030518 ID=PGSC0003DMT400078386.v4.03 annot-version=v4.03
Sequence

ATGGCGACCCTAATGTATCACATGTTGTCATCGTCTTCACTGTTATCTCTGGGATTCTAC
CACCTCATCTGCACCACCCGGAACCGCCTCAAATCCGCCGGAGACTACGTCACCAAACCC
TACCACCCTCTCTCCTTCATATCTCAGCCGCATCTCCGCCGTCTACCTCTTTATCTCCTC
CTTCTCTGCCTCCTCATTTCTCTGATCCATCAATCGCTCGTCTCTTTAGATGCCGATCCT
CTCCTCAAAGGTCATACTCCGGTGCACCGTTTCACCTCACTTCAAGCCGCCGCCGTTGTT
TTCTCGTTTCTAATACTCGTTGTTTTTCTCCTTATCTCCGAGTCAACTTCTCTTCTCCCG
CTTCCTCCCGATCTGTTCTTCGCTTTAGCTGCTGCACTTTTCTACCTACAGTATTCGGTA
TCCGATTCTTCTGCTTCCGTTCAAACCTCCGATCTCCAGGCTAAATGTGATTCCGTTTCA
GCTCGCATTTCTGCGCTCTCCGCGTTACTTTGTCTCGTGATTGCTGTTCAACCTAAGCTT
TTTCTGGCTGATGTTGCGTTAGCTGCTTCTATCTGTCTCCAGGGACTATGGGTTCTACAG
ACGGGACTTTCGCTTTACGTTGATGCGTTCATACCTGAGGGTTGTCATAAGTTATTGGAT
GTTGTTACTGGGGTAGAAGGTTCAACCAAATGCGATTTGGAGGACTCTAAGCTCAGGGCT
ATTGCTATACTTGATTTGGCTTTTGTCGTTCACGTGATGTTTGTCTTGCTCATTGTTACA
GTCACCTATGCTGCCGTTGCTAAAACTATTGGTATCAGGAGATTTGGTTCTTATGAGGCT
CTGCCCAATGCTGACTCGAGTCATATACAAATGAAGGCTATGACGGGAACTCAAGCTTGA